Basic Information

Insect: Campoplex nolae
Gene Symbol: -
Assembly: GCA_037893425.1
Location: JBBLXU010003303.1:229087-232039[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.2e-05 0.001 19.4 1.7 1 23 327 349 327 349 0.99

2 12 0.0024 0.2 12.2 5.5 1 23 353 375 353 375 0.98

3 12 0.00078 0.066 13.7 4.3 1 23 380 402 380 402 0.96

4 12 0.00026 0.022 15.2 3.5 1 23 459 481 459 481 0.97

5 12 0.00079 0.066 13.7 1.4 1 23 486 508 486 508 0.97

6 12 9.9e-05 0.0083 16.6 2.2 1 23 559 581 559 581 0.98

7 12 0.0026 0.22 12.1 1.2 2 23 589 610 589 610 0.98

8 12 9.8e-07 8.3e-05 22.9 2.1 1 23 621 643 621 643 0.96

9 12 6.2e-05 0.0052 17.2 1.0 1 23 649 671 649 671 0.98

10 12 0.00016 0.013 15.9 0.7 1 23 677 699 677 699 0.98

11 12 4.7e-06 0.0004 20.7 2.0 1 23 705 727 705 727 0.96

12 12 8.4e-05 0.0071 16.8 0.3 1 22 733 754 733 754 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.2e-05	0.001	19.4	1.7	1	23	327	349	327	349	0.99
2	12	0.0024	0.2	12.2	5.5	1	23	353	375	353	375	0.98
3	12	0.00078	0.066	13.7	4.3	1	23	380	402	380	402	0.96
4	12	0.00026	0.022	15.2	3.5	1	23	459	481	459	481	0.97
5	12	0.00079	0.066	13.7	1.4	1	23	486	508	486	508	0.97
6	12	9.9e-05	0.0083	16.6	2.2	1	23	559	581	559	581	0.98
7	12	0.0026	0.22	12.1	1.2	2	23	589	610	589	610	0.98
8	12	9.8e-07	8.3e-05	22.9	2.1	1	23	621	643	621	643	0.96
9	12	6.2e-05	0.0052	17.2	1.0	1	23	649	671	649	671	0.98
10	12	0.00016	0.013	15.9	0.7	1	23	677	699	677	699	0.98
11	12	4.7e-06	0.0004	20.7	2.0	1	23	705	727	705	727	0.96
12	12	8.4e-05	0.0071	16.8	0.3	1	22	733	754	733	754	0.96

Sequence Information

Coding Sequence: ATGGATAGAGTTTGTCGAATATGTTTACTCGAAGGGACCAATTTATCGCCAATATTTTGCACCGAACAAGAGGTCGATGAATATTCTGGTTTGCCACAAAAGATTCAAGTATGTGGCTCTATCGAAATACACGAGAACGATGGTTTTCCGTCATTGATATGTGACGTCTGTATTTACAAAGCCAGCATCGCTCATGAATTTCGACAACAGTGTCAGCAATCTGATGCACGATTGAGGCTTCTTTATGACCCAAACAAGTCCAATGGAACAGATATTACCGAATCTTGTACGCAGACCGAGCCCCAAACCCGAATTATATTGACGAGGAAGATGCCAAGTCCGTCGACAACGTACTACGTGAAGCAGGAGTTGCAAGCATCAAATTCACAGGATTATGCAAGTGCGATTGAGGCGTATACGGATTCTCAAGTACAAACAGTGAGTCAGACTGATCACCCGATAGACTGTCAGGACGACAAgctttttctttgtaatattgGTTTCGACGGGCCAAAAGAAATGACGGAGAAGGAAACGAGCATAATGAGTGTGGAGCCTTCACATCAAGTGGAATGTCCGATTGTCCAAACGGAAATGACGACGACACTCATGACCGTAAATGCGAATGGTCACTTGGAGACACAACAATTAGTTGTTAAGGACGACAGTCAAAAGTGCGAGGGTACGCCGATCGAGGaggaatatttgaatgaacaaatattgaacgaaaccGTAATAGACGATAATATCGAAGCTGAGAGTGAAGATTTCGAGGAAAGACAACAAGAAGAACTTTTGCAACAGCAGCAagagcaacaacagcaacaacaacaacatcagCAAGAAGaagatacgatgaaaaaacgtaCATCATCGAGAAGAGTAAAATCAGCATCCTACAGCGAAGATGAAATGGGCCAAGACAATTATTTCACGACGATAGAAAATGACACAGAAGAATCCGACACGAAGCCCAAATACAAATGCAACGTTTGCCTGAAACGTTACACGACCCAAAAGGGCCTGAAAAATCATCTGCAAGTACACGAGAAAAATCACAAGTGTCCTGTGTGTCACAAACTATTTTACAAGctaaaaaacatggaaaatcaTCAAAAGTTACACGAGACTAAACCGCACGCTTGTCGAACGTGTCACgcgagtttttcaaaattggcgAGTTTAACGCGACACTTGAAATCGCACGAAGATAAATGTGAGGAGGAAAGTTCGTTGGCGTGTGAAGCGAACGAGGTTGCGAAGGAAGAAATGGAAATGTTGAAAACCGACACGCACAGCGACCTCGAGACTGACGACGAAACGACGATCGTAGCTGGCACCGAAATCGACGAATTTGAGAATGCTCCAGGAATATACAAGTGCGAAGTGTGCAATCAATTTTGTTCGTCGTTGAAGAATCTGAAGAGACACAGCCTTGTAcacggtgagaaaaaatattcttgtaCGGTAtgtaaaaaatggtttttcagACCGGACACATTGAAGAAACACGCGGAAAAACATGGACATGGTTTGCTCGATAATCTCGTTGACGACAACAAATTGTTCGATTCGGATGATGATAATTTCTCGAATTCATCGATCGGCCACGGGGTAAAAAACGATGCAGCTAAATCCTCCCGAGACGAGAGCGAGGACGATGGTGTTGGAGAATACAAATGTCAGCATTGTGACAAAGTAATGGCAACGAAAAAAGGCTTGAGGAGACACGTCTCGATGCATAAGCCTAAAGCCGAGCCAGCGACttgtgaaatttgtaaaaaagtaTGCGCCAGTCAAGCGCGCCTCGGTTTGCACCTCAAGACCCACAACAAACCAAAGGAAAAGGTTCAACGTGAATATCTCTGTCACATATGTAGCAAAGTTTATCCGAGCAATTCTTCGTTGACTTATCACATGAGAACTCATACGGGCGTTAAACCACATGTATGCAAAATTTGTAACAGTGGCTTCACGACTACGACCAGTTTGGCTAATCACATAAGAATTCATACAGGTGATAAACCGTTCGTTTGTCATGTTTGCAGCGCCGCTTTCGCTGTTAGCTCGGCGTTCAGACGACACTTAACGAGACACACCGGTGAAGCTAATTATTTGTGTAAAACGTGCGGTAAAGCGTTCAAACGATTGAGCACCCTCAAAGAGCACACTTATACGCATTCCGGCGAAAAGCCCTACGTTTGTAAAACATGCGGTGCTGCTTACAGCCACAGCGGTAGTCTTTTTGCTCATCAAAAACGTTGTAGAGTACAATACAGTGAAATGATCGAGGATCACAATGTTGCCCATCATATTCACGTTAATAATGTACAAACCGCCGTTCGTTCACTCGCTGTCATTGGACAGATGTATTaa
Protein Sequence: MDRVCRICLLEGTNLSPIFCTEQEVDEYSGLPQKIQVCGSIEIHENDGFPSLICDVCIYKASIAHEFRQQCQQSDARLRLLYDPNKSNGTDITESCTQTEPQTRIILTRKMPSPSTTYYVKQELQASNSQDYASAIEAYTDSQVQTVSQTDHPIDCQDDKLFLCNIGFDGPKEMTEKETSIMSVEPSHQVECPIVQTEMTTTLMTVNANGHLETQQLVVKDDSQKCEGTPIEEEYLNEQILNETVIDDNIEAESEDFEERQQEELLQQQQEQQQQQQQHQQEEDTMKKRTSSRRVKSASYSEDEMGQDNYFTTIENDTEESDTKPKYKCNVCLKRYTTQKGLKNHLQVHEKNHKCPVCHKLFYKLKNMENHQKLHETKPHACRTCHASFSKLASLTRHLKSHEDKCEEESSLACEANEVAKEEMEMLKTDTHSDLETDDETTIVAGTEIDEFENAPGIYKCEVCNQFCSSLKNLKRHSLVHGEKKYSCTVCKKWFFRPDTLKKHAEKHGHGLLDNLVDDNKLFDSDDDNFSNSSIGHGVKNDAAKSSRDESEDDGVGEYKCQHCDKVMATKKGLRRHVSMHKPKAEPATCEICKKVCASQARLGLHLKTHNKPKEKVQREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKICNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRVQYSEMIEDHNVAHHIHVNNVQTAVRSLAVIGQMY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00439682;
90% Identity: iTF_01299482;
80% Identity: -