Cnol005351.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Campoplex nolae
Gene Symbol
Hr39
Assembly
GCA_037893425.1
Location
JBBLXU010001248.1:1682967-1690366[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.61 3.7e+03 -3.0 7.6 76 163 214 330 159 371 0.66
2 4 3 1.8e+04 -8.6 15.4 82 141 379 442 335 484 0.48
3 4 5.7e-08 0.00035 20.1 0.0 1 21 551 571 551 575 0.92
4 4 4e-63 2.4e-59 201.8 0.0 172 408 702 932 584 932 0.79

Sequence Information

Coding Sequence
ATGTCGGAACAAAACGGGCCTACGGAGGGCCCGGGCTGGTGGCCAACCTCGCAGTCCTGGAAATCAGCTAGCAACGCTTCAttgtcgtcgtcctcgtcgatTTCATCCTCGCGCACCCTCGAggctggaaaaaatgtttctgtcACGACGATCAACGTGCCACCGGCCCAGGAAATGCACGACGGTAAAAGCGTATGCAAATATCTGGGAGGTCAAAATGGCGTGACGGTATCGGTGGTCTCGAATTGCGGAAGTGGTCCAGGCAGCGGCATGGGCACAAGACccggaggaggaggaggaggagggagcgGAGGAGGGAGTGGAGGTGCATCTTCTTCGTGTCCGGAATCAAGTTGCCTCGAGGATTTTGAGGACAGTGACGGTGAAGTtagtaaaatcgattttcgggGGGTTAATctacgaacgaagaaaaaacgagacgcCTCGGGTGGATCGGAGAACGAATGCGGCGCCGTCGGTGCCGACAATCTCGAGCAACAACAGCCTGAGAGACCAATGTCATGGGAGGGCGAATTATCCGATCAAGAAATGTCTTCCAATACCATAGCTAATCAGGATCACGAGGAAACGTCGATGGAAGGTGTTCAAGTATGCGGAGCGAGTCCAGGGCCACAGGAGCAAAAGTTTCCGATAAAGCCAGAGCCTGATTTTCGTTCGAGTCCGGGTTTGTTGATAGGATCGCACAACGACGGTAGTTTGGGGCTGTCGCACGTTCAGCAGatgcaacagcagcagcaacagcgaGGTATCGATGGTTTGGAATCGACGCAGCAGAGCGATCTTCCGTTGTTGGTTGGAAAGCTTTTGGGCGGTTACAGCAGTTCGACGCCGAATCATAGTCCGATATTGAATCCGCGTCATCATTTAACGAAGCACAGTCATACGAGGTCGCAGGTGCCCTCGCCAGATTCGGCGATTCATTCAGCGTACAGCGTCTTCAGTTCGCCGACCCAAAGTCCGCACGCCGCTCGTCATTCGGCCCTGGGTGCTGGTAGTCCGGTGCCATCGTCTTCATTGTCACGTCACAGTTTCAACAATTCAACATCTTCGTTATCCCTCTCGTTGTCGCATTCATTGTCCCGCAACAATTCGGACGCTTCGAGCAGTTGTTACAGTTACGGCTCGCTAAGTCCGCCCACGCATTCTCCGATCCAGCAGCCAAGACACTCGCACGCGCagcatcatcaccatcatcatcatcaacaacagcagcagcagcagcagcatcagcatCAACAGCAATTATCACAAGGCGGTAGCCCTCTGCATTTAGCTTCATCAACAGCCACCAATCCCCACAATTACGGACATCAAAGTTCGGAAATATCCTCAGAAGGAGGTCGTCCCGAGGATCAGGAAGACTGTAAAATTCCAACTGCCACTTCGGGCATCTCGACGAGGCAGCAATTAATAAACAGTCCCTGTCCGATTTGCGGCGACAAAATAAGTGGCTTTCATTACGGTATATTTTCGTGCGAATCTTGCAAaggttttttcaaaagaaccgttcaaaatcgcaaaaattacGTTTGTCTCCGAGGCGCTGGATGCCCCGTTACCGTCGCAACCAGGAAAAAATGTCCTGCTTGTCGTTTTGACAAATGTCTTAATATGGGCATGAAATTGGAAGCTATCAGAGAGGATCGAACCCGCGGCGGTAGAAGCACTTATCAATGCACTTATACACTCCCTGCTAATTTGATTGGGAGCTCCGGTGGTGGAATGCCCAACGATAAAATGACCGGTGGAAATTGCAGTCCGGCTCCACCCGGCTCCGAGCACCATCATTCGGCAAGGCATCATTGGAATCATTCCCACAAAATCCAGGTGGTCCCACAACTGTTGCAGGAGATGATGGACGTCGAACATTTGTGGCACTACAACGACAACGATCGTGTAACCGGCGGCAGGCAAAGTAGCAACGCCCCCGGCGGTGGCAATGGTTCTCCCATGCCCAATGACATCCCTGGCGTCGGCGGCCTCGGCTCCGGTGCTGACCCTGGAAGCCTCAATACCCCAACCAACAACGGCAACGTCGATAATCGTTGCGAAACAACTAGATCCAATAATTCACCGTCCAGCCTCACCAACGAGcaacatcaacaacaaaattcaacCTCCAATAATCCAACCAATGGCAGCAACAGTACAACCCCCAATCCCAATGGCAATACCGCACAAGATCCCGACGTTCCACCGACTCTCAGCGAAATCGTCGATCATCGACTGTACAAAATTGTCAAATGGTGCAAAAGTTTGCCGCTCTTCAAAAATATCTCTATCGACGATCAAACTTGCCTGCTGATCAATTCGTGGTGCGAATTGCTACTGTTTTCATGCTGTTTTTGCAGCATGAGCACGCCCGGTGAAATTAGAGTTTCCCTCGGCAAATCCATCACTCTCGAACAAGCTAGACAATTGGGACTCGCAACCTATATCGAAAGAATGCTCGCTTTTACTAATAATCTGCGAAGGCTCAGGGTCGATCAATACGAATACGTCGCGAtgaagGTAATCGTTCTGCTGACATCGGACATGAGCGAGCTTAAGGAACCCGAGAAAGTGAGAGCTTCCCAGGAGAAAGCGCTGCAAGCTCTTCAGCAGTACACGATTGCGAGGTATCCGGAAATGCCGGCAAAATTCGGCGAGCTATTGCTCCGAATACCTGATCTTCAGAGAACTTGTCAAGTCGGTAAGGAGTTGCTGAGTGCCAAAAAGGCCGAGGGAGAAAGcagttctttttatttgttgatgGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPTEGPGWWPTSQSWKSASNASLSSSSSISSSRTLEAGKNVSVTTINVPPAQEMHDGKSVCKYLGGQNGVTVSVVSNCGSGPGSGMGTRPGGGGGGGSGGGSGGASSSCPESSCLEDFEDSDGEVSKIDFRGVNLRTKKKRDASGGSENECGAVGADNLEQQQPERPMSWEGELSDQEMSSNTIANQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPGLLIGSHNDGSLGLSHVQQMQQQQQQRGIDGLESTQQSDLPLLVGKLLGGYSSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPIQQPRHSHAQHHHHHHHQQQQQQQQHQHQQQLSQGGSPLHLASSTATNPHNYGHQSSEISSEGGRPEDQEDCKIPTATSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSSGGGMPNDKMTGGNCSPAPPGSEHHHSARHHWNHSHKIQVVPQLLQEMMDVEHLWHYNDNDRVTGGRQSSNAPGGGNGSPMPNDIPGVGGLGSGADPGSLNTPTNNGNVDNRCETTRSNNSPSSLTNEQHQQQNSTSNNPTNGSNSTTPNPNGNTAQDPDVPPTLSEIVDHRLYKIVKWCKSLPLFKNISIDDQTCLLINSWCELLLFSCCFCSMSTPGEIRVSLGKSITLEQARQLGLATYIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDMSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQVGKELLSAKKAEGESSSFYLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00059522;
90% Identity
iTF_00266535;
80% Identity
iTF_00266535;