Ccap000283.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Campoplex capitator
Gene Symbol
Hr39
Assembly
GCA_037576405.1
Location
JARBWI010000001.1:3195072-3202232[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.56 4.4e+03 -2.9 7.4 76 163 211 327 161 368 0.66
2 4 3 2.3e+04 -8.4 15.3 82 141 376 439 332 481 0.48
3 4 5.7e-08 0.00044 20.1 0.0 1 21 548 568 548 572 0.92
4 4 5e-63 3.9e-59 201.5 0.0 174 408 701 929 581 929 0.80

Sequence Information

Coding Sequence
ATGTCGGAACAAAACGGGCCTACGGAGGGCCCGGGCTGGTGGCCAACCTCGCAGTCCTGGAAATCAGCTAGCAACGCTTCAttgtcgtcgtcctcgtcgatTTCATCCTCGCGCACCCTCGAggctggaaaaaatgtttctgtcACGACGATCAACGTGCCACCGGCCCAGGAAATGCACGACGGTAAAAGCGTATGCAAATATCTGGGAGGTCAAAATGGCGTGACGGTATCGGTGGTCTCGAATTGCGGAAGTGGTCCAGGCAGCGGCATGGGCTCAAGACccggaggaggaggaggaggaggagggagtGGAGGTGCATCTTCTTCGTGTCCGGAATCAAGTTGCCTCGAGGATTTTGAGGACAGCGACGGTGAAGTTagtaaaatcgattttcgggGGGTTAATCtacgaacgaagaaaaaacgagacgCCTCGGGTGGATCGGAGAACGAATGCGGCGCCGTCGGCGCCGACAATCTCGAGCAACAACAGCCTGAGAGACCAATGTCATGGGAGGGCGAATTATCCGATCAAGAAATGTCTTCCAATACCATAGCTAATCAGGATCACGAGGAAACGTCGATGGAAGGTGTTCAAGTATGCGGAGCGAGTCCAGGGCCACAGGAGCAAAAATTTCCGATAAAGCCAGAGCCTGATTTTCGTTCGAGTCCGGGTTTGTTGATAGGATCGCACAACGACGGTAGTTTGGGGCTGTCGCACGTTCAGCAGatgcaacagcagcagcaacagcgaGGTATCGATGGTTTGGAGTCGACGCAGCAGAGCGATCTTCCGTTGTTGGTTGGAAAGCTTTTGGGCGGTTACAGCAGTTCGACGCCGAATCATAGTCCGATATTGAATCCGCGTCATCATTTAACGAAGCACAGTCATACGAGGTCGCAGGTGCCCTCACCAGATTCGGCGATTCATTCAGCGTACAGCGTCTTCAGTTCGCCGACCCAAAGTCCGCACGCCGCTCGTCATTCGGCCCTGGGTGCTGGTAGTCCGGTGCCATCGTCTTCATTGTCACGTCACAGTTTCAACAATTCAACTTCTTCGTTATCCCTCTCGTTGTCGCATTCATTGTCCCGTAACAATTCGGACGCTTCGAGCAGTTGTTACAGTTACGGCTCGCTAAGTCCGCCCACGCATTCTCCGATCCAGCAGCCAAGACACTCGCACGCGCagcatcatcaccatcatcatcaccaacaacagcagcagcagcagcagcatcagcaTCAACAGCAATTATCACAAGGCGGTAGCCCTCTGCATTTAGCTTCATCAACAGCCACCAATCCTCACAATTACGGACATCAAAGTTCGGAAATATCCTCAGAAGGAGGTCGTCCCGAGGATCAGGAAGACTGTAAAATTCCAACTGCCACTTCGGGCATCTCGACGAGGCAGCAATTAATAAACAGTCCCTGTCCGATTTGCGGCGACAAAATAAGTGGCTTTCATTACGGTATATTTTCGTGCGAATCTTGCAAaggttttttcaaaagaaccgtccaaaatcgcaaaaattacGTTTGTCTTCGAGGCGCTGGATGCCCCGTTACCGTCGCAACCAGGAAAAAATGTCCTGCTTGTCGTTTTGACAAATGTCTTAATATGGGCATGAAATTAGAAGCTATCAGAGAGGATCGAACCCGCGGCGGTAGAAGCACTTATCAATGCACTTATACACTCCCTGCTAATTTGATTGGTAGCTCCGGTGGTGGGATGCCCAACGATAAAATGACCGGTGGAAATTGCAGTCCGGCTCCACCCGGCTCCGAGCACCATCATTCGGCAAGGCATCATTGGAATCATTCCCACAAAATCCAGGTGGTTCCACAGCTGCTGCAGGAGATGATGGACGTCGAACATTTGTGGCACTACAACGACAACGATCGTGTCACCGGCGGCAGGCAAAGTAGCAACGCCCCCGGCGGTGGCAATGGTTCTCCCATGCCCAATGACATCCCTGGCGTTGGCGGCCTCGGCTCCGGTGCTGACCCCGGAAGCCTCAATACTCCAACCAACAACGGCAACGTCGATAACCGTTGCGAAACAACTAGATCCAATAATTCACCGTCCAGCCTCACCAACGAGcaacatcaacaacaaaattcaacCTCCAATAATCCAACCAACGGCAGCAACAATACAACCCCCAATCCCAATGGCAATACCGCACAAGATCCTGACGTTCCACCAACTCTCAGCGAAATCGTCGATCATCGACtgtacaaaattgtcaaatggTGCAAAAGTTTGCCGctcttcaaaaatatttctatcgaCGATCAAACTTGCCTGCTGATCAATTCGTGGTGCGAATTGCTACTGTTTTCATGCTGCTTTTGCAGCATGAGCACGCCCGGTGAAATTAGAGTTTCCCTCGGCAAATCCATCACTCTCGAACAAGCTAGACAATTGGGACTCGCAACCTATATCGAAAGAATGCTCGCTTTTACTAATAATCTGCGAAGGCTCAGGGTCGATCAATACGAATACGTCGCGATGAagGTAATCGTTCTGCTGACATCGGACATGAGCGAGCTTAAGGAACCCGAGAAAGTGAGAGCTTCCCAGGAGAAAGCGCTGCAAGCTCTGCAGCAATACACGATTGCGAGGTATCCGGAAATGCCGGCAAAATTCGGCGAGCTATTGCTCCGAATACCTGATCTTCAGAGAACTTGTCAAGTCGGTAAGGAGTTGCTGAGTGCCAAAAAGGCCGAGGGAGAAAGcagttctttttatttgttgatGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPTEGPGWWPTSQSWKSASNASLSSSSSISSSRTLEAGKNVSVTTINVPPAQEMHDGKSVCKYLGGQNGVTVSVVSNCGSGPGSGMGSRPGGGGGGGGSGGASSSCPESSCLEDFEDSDGEVSKIDFRGVNLRTKKKRDASGGSENECGAVGADNLEQQQPERPMSWEGELSDQEMSSNTIANQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPGLLIGSHNDGSLGLSHVQQMQQQQQQRGIDGLESTQQSDLPLLVGKLLGGYSSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPIQQPRHSHAQHHHHHHHQQQQQQQQHQHQQQLSQGGSPLHLASSTATNPHNYGHQSSEISSEGGRPEDQEDCKIPTATSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSSGGGMPNDKMTGGNCSPAPPGSEHHHSARHHWNHSHKIQVVPQLLQEMMDVEHLWHYNDNDRVTGGRQSSNAPGGGNGSPMPNDIPGVGGLGSGADPGSLNTPTNNGNVDNRCETTRSNNSPSSLTNEQHQQQNSTSNNPTNGSNNTTPNPNGNTAQDPDVPPTLSEIVDHRLYKIVKWCKSLPLFKNISIDDQTCLLINSWCELLLFSCCFCSMSTPGEIRVSLGKSITLEQARQLGLATYIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDMSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQVGKELLSAKKAEGESSSFYLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00059522;
90% Identity
iTF_00266535;
80% Identity
iTF_00265790;