Ccap017856.1
Basic Information
- Insect
- Campoplex capitator
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_037576405.1
- Location
- JARBWI010000338.1:2189728-2193663[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.4e-118 1.7e-113 379.2 30.9 1 300 29 327 29 327 0.98 2 3 0.0037 86 2.6 2.6 122 171 327 376 325 382 0.91 3 3 0.033 7.7e+02 -0.5 5.2 194 237 358 400 337 404 0.57
Sequence Information
- Coding Sequence
- ATGGAGTCGACTATAGCGGGACGAAGACGTAACGCTACGAGGCACTCTGCCGAGGATCAAGCGCTCGACCAGATAGCCAAAGAGGCAGAAGCGAGACTGGCTGCTCGAAGACAGGCCCGTGCTGAAGCTCGGGAAATTCGGATGCGAGAGTTGGAAAGACAACAGAAAGAGGTGGAGGAGAATGCGGATAGAGTTTACGATATGTGCTCGGCAGAAGGAAACAGAACAATGCGAGTAACGCCTGATCCAGTGAGGACGTCACGCATACTCGCAAATTCGAACAACTTCCAGTCGAGTAGAAGATCATCGGAAGATTCTTTGGAAGATGCAGGATTAAGCAGAGATCTGAGATTAGAGCTCAAAGAATTCGAGGAAAAGTTTAGAAAAGCAATGATAGCGAACGCACAGTTGgacaacgaaaaatcatcgtaCGCGTATCAAGTTGATTTATTAAAAGACAAACTCGAAGAGTTGGACGAAACAACCGCTCAACTGAGACGTGAGCttagggaaaaaaatagagaagctGAACAACTGAAACGCGTAAGTCAACGATTAAAGGAAGATTTTGATGTATGCAGAGCTCAGTTGCTGGAGAGGGACACTCTCATTCAGGAAAATGGGCTGGTCATAGTGGACGACGAGGGTAGTGGAGACGAAGAGCATGGAACGGTGAATGGATCTTGTTACAGGAAAAGAGTACTAGTCAGCACAGAGGCTGCCGAGTTGTTAGAAAATGCTGGTGAAGGCTCGCTAgACGTTCGATTGAGAAAGTTTGCTTCCGAAAAGAAGGAATTGCAAGATGAAATTGGCCACTTGAGGTTGGAGTTGGAAGAAGCGAAGAGTCGTCTTAGATCCGAAAAATCCTCAGGTTCAGTATTAGGTGGATTTTCTGACTCCGAGGACGTTCAGAGAGAAGCGAACAAATTATTGGctgattataaatttaaattgcAAAAAGCTGAACAAGACATGTCAACGTTGCAGGCAACTGTCGCGAGGCTAGAGAGCCAAGTTATACGTTATAAATCCGCGGCTGAAGCATCAGAAAAAGCGGAAGATGAATTAAAAgtcgaaaagagaaaattgcAAAGAGAGGTTCGTGAGTCGCAAGGTCGTGTTGAGGAGCTTGAAACAGCGAATTCCCACTTACAGAGACGACTGGATAAACTAAAAAATGCTAAATCCGCACTCCTCAAAGATGCGTCTCAACGATAG
- Protein Sequence
- MESTIAGRRRNATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEVEENADRVYDMCSAEGNRTMRVTPDPVRTSRILANSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELDETTAQLRRELREKNREAEQLKRVSQRLKEDFDVCRAQLLERDTLIQENGLVIVDDEGSGDEEHGTVNGSCYRKRVLVSTEAAELLENAGEGSLDVRLRKFASEKKELQDEIGHLRLELEEAKSRLRSEKSSGSVLGGFSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKDASQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01102050;
- 80% Identity
- -