Ccap009091.2
Basic Information
- Insect
- Campoplex capitator
- Gene Symbol
- bab1
- Assembly
- GCA_037576405.1
- Location
- JARBWI010000021.1:3370220-3374079[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-16 8.7e-13 48.1 0.0 5 43 1 40 1 42 0.95 2 2 2.4 2.3e+03 -1.2 1.1 6 15 117 126 115 130 0.89
Sequence Information
- Coding Sequence
- ATGGCCGAAGCGATTTTCAGCGTTCTCAAGGAGGGACTTTCACTCAGCCAAGCTGCCAGGAAGTACGACATACCGTATCCAACGTTCGTACTGTACGCGAACCGAGTGCACAACATGCTCGGTCCAAGCGCCGATGGCGGGGCCGGTGAGTATCTTCGACCGAAGGGTCGTGGAAGACCACAAAGGATTCTACTGGGTGTTTGGCCCGATGAGCACATACGCAGCGTCATAAGAACCGTCGTGTTTCGCGATGGCAACATCAAGGAGGAACCAGCACCGATTTATCCGAGCCTGACGAATTACGCTTGCAACGGTCCCGAGGGTGCGGTCAGTCCCGGTGCCGCAGCCGCTGCTGCGGTCGCCGCGGTCGCTCAAGGTCTCCGGCATCAAATGTGCAGTATGGTAGCAGCGGCCCAGTCGCACCAGCACGACATGATAGCGACGAATTTATCAGCAAATTTTCAAGCAGCGGTACAAGTGAGTCAGCATCATTTGAACAACAACAGTCCGCcgagcagcaacaacaacaacaacagcaatagcaacaacaataataacaacaataacaacaatagTAACAGTAACAACAGGAATTCGCCACTGATGTTGGGTCTGCCGAGTCCAGGTTCGGGAGGTCCGCCGGAGAGTCCTATCGAGGGTAGTCCATTGGCGAGTCCGTTGGCGCCGTTGATGGATCCGGCTCACATACCGAGCAGCGTCGAGGTCGGGATAGGAGTTAGCGGAATGACCTACAAGCCGAATCGAAGTTTCATGAGTCCCCGGCcggacaatatttttcaagaggACATTTCTGAGCTGGTGAAAAGCGCCCATTCACACAAGGACAAAGACAAAATTCCAGTTAAACTGGAGCCCCTGGGAGAATCGCGAAgcgagcaataa
- Protein Sequence
- MAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRSVIRTVVFRDGNIKEEPAPIYPSLTNYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQAAVQVSQHHLNNNSPPSSNNNNNSNSNNNNNNNNNNSNSNNRNSPLMLGLPSPGSGGPPESPIEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPNRSFMSPRPDNIFQEDISELVKSAHSHKDKDKIPVKLEPLGESRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057558;
- 90% Identity
- iTF_01057558;
- 80% Identity
- -