Basic Information

Insect: Camponotus floridanus
Gene Symbol: ZNF236
Assembly: GCA_003227725.1
Location: NW:315736-333362[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 3.2e-05 0.0026 17.6 0.8 2 23 184 205 183 205 0.96

2 27 9e-05 0.0072 16.2 0.6 1 23 211 233 211 233 0.98

3 27 9.4e-06 0.00075 19.3 0.6 2 23 239 260 239 260 0.97

4 27 0.0052 0.41 10.6 0.2 3 23 268 288 266 288 0.96

5 27 5e-05 0.004 17.0 1.1 2 23 301 322 301 322 0.98

6 27 1.9e-06 0.00016 21.4 1.1 1 23 343 365 343 365 0.99

7 27 1.7e-06 0.00014 21.6 1.7 1 23 371 393 371 393 0.98

8 27 0.00025 0.02 14.8 0.7 1 23 399 422 399 422 0.96

9 27 0.0021 0.16 11.9 1.5 1 23 431 454 431 454 0.97

10 27 3e-07 2.4e-05 24.0 0.4 1 23 574 596 574 596 0.98

11 27 0.00043 0.034 14.1 0.8 1 23 602 624 602 624 0.99

12 27 0.034 2.7 8.1 5.6 1 23 630 652 630 652 0.97

13 27 0.45 36 4.5 4.7 1 21 656 676 656 678 0.94

14 27 0.0066 0.53 10.3 7.8 1 23 733 755 733 755 0.98

15 27 2.5e-05 0.002 18.0 4.9 1 23 761 783 761 783 0.99

16 27 4.1e-06 0.00032 20.4 2.1 1 23 789 811 789 811 0.98

17 27 0.00078 0.062 13.2 8.2 1 23 817 839 817 839 0.98

18 27 4.1 3.3e+02 1.5 2.3 2 23 1195 1216 1194 1216 0.90

19 27 0.00026 0.02 14.8 2.6 1 23 1222 1245 1222 1245 0.98

20 27 0.0011 0.087 12.8 4.5 2 23 1249 1270 1248 1270 0.97

21 27 2.2e-08 1.8e-06 27.6 1.4 2 23 1342 1363 1341 1363 0.98

22 27 0.00018 0.014 15.2 5.0 1 23 1369 1391 1369 1391 0.99

23 27 8.8e-05 0.007 16.2 4.1 1 23 1397 1419 1397 1419 0.97

24 27 2.1e-05 0.0017 18.2 3.0 1 23 1425 1447 1425 1447 0.99

25 27 1.1e-06 8.8e-05 22.2 0.8 2 23 1692 1713 1691 1713 0.97

26 27 1.3e-05 0.001 18.8 4.6 1 23 1719 1741 1719 1741 0.98

27 27 6.9e-06 0.00055 19.7 5.5 1 23 1747 1770 1747 1770 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	3.2e-05	0.0026	17.6	0.8	2	23	184	205	183	205	0.96
2	27	9e-05	0.0072	16.2	0.6	1	23	211	233	211	233	0.98
3	27	9.4e-06	0.00075	19.3	0.6	2	23	239	260	239	260	0.97
4	27	0.0052	0.41	10.6	0.2	3	23	268	288	266	288	0.96
5	27	5e-05	0.004	17.0	1.1	2	23	301	322	301	322	0.98
6	27	1.9e-06	0.00016	21.4	1.1	1	23	343	365	343	365	0.99
7	27	1.7e-06	0.00014	21.6	1.7	1	23	371	393	371	393	0.98
8	27	0.00025	0.02	14.8	0.7	1	23	399	422	399	422	0.96
9	27	0.0021	0.16	11.9	1.5	1	23	431	454	431	454	0.97
10	27	3e-07	2.4e-05	24.0	0.4	1	23	574	596	574	596	0.98
11	27	0.00043	0.034	14.1	0.8	1	23	602	624	602	624	0.99
12	27	0.034	2.7	8.1	5.6	1	23	630	652	630	652	0.97
13	27	0.45	36	4.5	4.7	1	21	656	676	656	678	0.94
14	27	0.0066	0.53	10.3	7.8	1	23	733	755	733	755	0.98
15	27	2.5e-05	0.002	18.0	4.9	1	23	761	783	761	783	0.99
16	27	4.1e-06	0.00032	20.4	2.1	1	23	789	811	789	811	0.98
17	27	0.00078	0.062	13.2	8.2	1	23	817	839	817	839	0.98
18	27	4.1	3.3e+02	1.5	2.3	2	23	1195	1216	1194	1216	0.90
19	27	0.00026	0.02	14.8	2.6	1	23	1222	1245	1222	1245	0.98
20	27	0.0011	0.087	12.8	4.5	2	23	1249	1270	1248	1270	0.97
21	27	2.2e-08	1.8e-06	27.6	1.4	2	23	1342	1363	1341	1363	0.98
22	27	0.00018	0.014	15.2	5.0	1	23	1369	1391	1369	1391	0.99
23	27	8.8e-05	0.007	16.2	4.1	1	23	1397	1419	1397	1419	0.97
24	27	2.1e-05	0.0017	18.2	3.0	1	23	1425	1447	1425	1447	0.99
25	27	1.1e-06	8.8e-05	22.2	0.8	2	23	1692	1713	1691	1713	0.97
26	27	1.3e-05	0.001	18.8	4.6	1	23	1719	1741	1719	1741	0.98
27	27	6.9e-06	0.00055	19.7	5.5	1	23	1747	1770	1747	1770	0.97

Sequence Information

Coding Sequence: ATGTCTGCCAATATGTTAACAGAGCAGAACGTAATTATGGAATTTACTGACTCCAGTGATACAGTACCGATTGGTTTTATCACCACCGATGATGGTCATACACTTTTCGCAATGGGTGaacATGAAGATGGTACATGGGAAATCATGACGACCCCTATTACATTAATgccacaaaataatataatgtcttCAGCACTGATAAAAACTGTAGATGGAAACTTTGTATTACATTCGcctatttttcaattaaatgtaGAAGGTTCATCAGGAACTGTAATGCAACAAGTAAACCTACTTCCAATACAACAGAATGCGTCTATGATTACGGAGCAATTGAAAGTAGTACAGAATGTAAATGAATGTGCAATTACAGAGCCTTTGTCTATCAGAGAAGATAGCAGCATATTACTAAATAAAGAGGAGAATTGTAAGAGGCAAACAGAGGGGCAAACAACAATTGacaattatcttaaaaataaatctatatctaCAGCTGTACATAAAAAGTCTCCAGGGAGACCAAAAAAGACTGagAATACACAATCTTTGAAATGTGATATATGTGGACAAGAATTTACTAAACAAATGTTATACCGTAGACATATGGAAAATCATGCCGAAGAAAAACCGCACAGATGCCCAAAGTGCCCAgcatcttttaatattcctACAAATTTCACGCTTCATATGGCAACGCATAATATCGGCGACCCGAAATGTCCCGAATGTGGTAGGAAATACACTAGAATGGCGAGTCTCAAATCTCATATGCTGCTACATGTGAAGGAGGAGAATCTTTTCTGCACGGAATGTGAAGACGCCTTTTCAACAAAagctCAACTGGATGCGCATTTGAAGCTTCATGGAGAAAAGTGGGCAAATGAGGATGTTGGTGTACGAAAGTGTAAATTATGCAACAAGCAATTCACGCAACCAGCTCTCTACCGAATGCACATTCGCGAACATTATAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGAGGAACGAAACATAAAACAATGTATAAATGTACCATATGTTTgaagaattttcaaaaaccGAGCCAATTGATGCGACATATCAGAGTGCATACTGGAGAGAAACCATTTAAGTGCACCCTTTGCACCAAGGCATTCACGCAAAAAAGTTCGCTACAAATTCACGCGCGGCAACACAACGGTATCCGACCGCACAGCTGCAGCCTCTGCAGTGCCAAATTTGGCCAGAAAGGAAACCTAAAAGCACATATACTCAGAGTACATAATGCGCCAGAAGGTGAGCCCACGTACGCCTGCTCTTATTGCTCTTGCATTTTCAAGAAGCTGGGCAGTTTAAACGGCCACATAAAGCGAGTACATTCTAATCCAGAGGAGGAATCTGCCGATAAATCCTCGGCAGTTAATTCTGCTATCTCTTCGGAAGCTGACATGCGTGCGACAGTTGATAGCGTTATATCGCAGTTGGCGTCTTTGGAAGCCGTCGTAAATAATACCGCAGATTCCGGGACGCTGAATGCAGAGCAGAACGATATCCTTCAACAGGCGTTGAAAAATAGTGGTTTGCCGAATAAGAATGAAGTTGTTTCGAAAGAAATCGCAGAACCGAAAAAGACGGATTCACCAACAACGTATGTCACATTGTTGGACAAGACTGCTGGCAATACTTCAAGGAAATACCATGCCATAAAACAACGCTGCATAGGAAACGTACGGTGGTATGTATGTTCGTTTTGCCCGAAAGAATTCAAAAAACCATCTGACTTAATACGACATTTGCGAGTGCACACGCAGGAAAAGCCCTTCAAGTGTATGTATTGCGTGCGTTCCTTCGCGCTAAAATCGACAATGATAGCGCACGAGCGAACTCATACCGGAGTAAAGAAATATGCTTGCACCTCCTGCAACAAAACCTTCGCTTGTCATAGTAGTCTTACTTCTCACACAAGatTACATATGAAACCACATAAATGCAGTATCTGCAGTAAATTATTCAACTCCAGCATCATCCTGAAAAATCATATGAAATGTCATATGCGCGAGAAACCCAAAATATCTCCAGAGGCAGAAAGTCTAGTATCGCAAGTAGTACTACAGGAACCACTTGTTATCAGTGATGCCGGTAACAAGATTAGCTTTGCCCAAGTGCAGTCGAAGCAAAAGCAATTGTACGAGAATGCCGGCGCGACCAGGCCACATGAGTGTTGGGTCTGTCATGCTGCATTTAGAAAAGTCAGCCATTTGAAGCAACATCATCGTAGACACACGGGCGAACGTCCTTACAAATGCTCTAAATGCGACagGAGATTTACATCAAACAGTGTCCTGAAATCTCATTTGCATACGCACGATGATGCGAGGCCATACAGTTGTTCAATATGCAATACAAAATTCTCCACACAAAGCAGCATGAAGAGACATTTGGTCACACATAGCAACAAAAGGCCATTTATGTGTCCATATTGTCATAAAACGTTTAAGACGTACGTCAATTGTCGAAAACACATAAAAAGACACAAGCATGAACTGGTGCAACGGCAATTGGAGGAACAAAAGACGCAAGAGCAGAAGGAACAACAGCCTTtgagagaaaataaagagGCTGGCTCGGCAGCTCTACCGGAAATTACTCTTGCCGAAGATATGGAAGTATCGTTTCAACCGCAAATGGCGCCAGATTTCACGCAGGCCTTTTCTGatcaatttcaaaatatcaatgCAGAAAAGGATAAGTCCTTCTTATTGACAAATAACACGACAGCGGTAACAAACCAAAATTTATCTGTTGACACAACTAATTTAGGAACTTCGCAAACTTTACATGCCGATGAAACTGGCACTATTACGTTGTCTCATTACTCTGGGGATCAAACTCTCACAGCGgaAAGCATACGAGAGATCGAGGAGACACTGAATCAACAGCTGTTTAATATTGACATGAATCTTGGACTGGCAAACAATCTACCAAAGCAGATAGACGAGACGAATACGAGTTCTCTCAATTCCAGAGAACAGCCAGTgctcaatataatttatgaacaTAACAAAAATCTAGATTCATCTGGCAATACTATATTCACGTCGCAATTCGATTCATTTGATATGAGCCAGATTACATTACAGACGGACAGTGAGATGGACATTGGTTTGAATCCGACCAACACGACGAGCATGTCTGATATTTTGTCGAAATCCATAGAAGGAGGCAATAAACAGCGAGAAGAACAACGAGCTATTCCAGTTACTACAGTTGATAGTATAGACCCTTCTGCAATTACGAAGAACGCTCATTTGATGGTAATAAATCCTAAGGATAATTGTTCGGAATTAGTAAATCTTTCGCAAGTATGTCCATCGAAATATTCAAAAGTTATTGCGAAAACGGATACTACAAACGGTTTGCTCGAAATGCAAAGCACGACTGAACCTGAAAGAATGCCACAGAAAAGTAATGTTATATCATGTGAGAGTGAACGAAATTCTTTATTCATGAAGAACTTCCAAAGTCCAATGCAGCCGGAGACACTCATTTCTTCTGGAACGAATAGGTCGGCCAAAATATCAGAATACAATAATTTGTTAGAATGCCACATATGCCATCGTAATGATTTCACGGCAGAAAGATTAAAGGAACATTTAGAATCTCATTGTGGTTCCAAACTGTACGAATGTCCAAAGTGTTCTCAGCGATTCCATACGAATGGTGGTCTCAGCAGACACACAAAAAGACTGCATACAGAGCTGAAATGTACAACTTGTAAGAAAGTATTGGACAACAAATCACAATTGAAACATCACAGCAAAATGCATAGCGGAGTTTTGAAAGTTGTACGCGTGGAATCGAACGAGAAGGAAACGATTTCCTCCAGTTCTCGTCTTCCGTCAATAATGACACTAGATGTCCCAGTAAATCCGGACTCGTCGGTATCTGAGAAGGTATTGATGGACGCGGTTGCCGAGAGAAAATCCATGGATCGCGTGGACGAAAACGCGgggaaaaaagaaacgaaagaATATACGAATAAATGCAAGTACTGTCCAAAAACCTTCCGGAAGCCGAGTGATCTTATTAGGCATATTCGCACGCACACGGGCGAGCGACCGTACAAGTGCGATCACTGCAGCAAGAGCTTTGCAGTTAAGTGTACTCTGGACTCGCATATGAAGGTTCACACGGGCAAGAAGACATTCTGCTGTCATGTTTGCAACAGCATGTTTGCTACGAAGGGCAGTTTGAAGGTCCACATGCGACTGCATACAGGTTCGAAGCCATTCAAGTGTCCCGTGTGCGACCTGCGATTTCGCACTTCGGGTCATAAAAAGGTGCATATGCAGAAGCATGCGAGAGAACATAAGGGCGGCGCGAAACGCAAGCCTAAACATCAAAAGATCGCGGCAGTGGCGGAAGCGGCGGCTAGCCTCGAAAGCATCGGTAACGATTCTCTGGACACATCGAGGACGACGACGGAGACCATGATCAACAGCGGTGAAATCGCGCCACCGCAGACTCTTGATTATTCCCCATTGGAGCACACTGAAATGAACCTTGGTGATACGAATCACCTGCCTAATCAAATCACGTTCAATCATACCGATGCGACAACGACGATTCTCAACAACAATTCCATGCTGTCATTAAACGACAGCAATGAACTGGTAGCGAACCTACAATTTCTATTAGCAAACGGTCTCGTTACCATCCAAACAGACGATACTATGCTGACGACGCAGCCAGGAGCAAACGGCGTCGCCGAAGTGCCAACCAACATGATCGAATTAGTCGGTACGAATCCCTTCCAGGAAACTTGCACTTTAGGTGACGCCAATCATCAGATAGTGATAACCAGCCAAGTGCCAAGCGAGACGACTACCACGAATGCGAACGATACAGCAATTATTCAGATGAACGATTGCTTGCCACCTGTTTCCATAGTACATGTACAGAATCAAGGTACAAACATTAGTGGCGAGGCATCCAAAACAAAGACGAGCGGTCAATCAGCAACGATAGCATGTAATAGTCGAGCGGTGACGACGGGAACAGCTAAAACCTCGACACAATCGTCACGAAAGGAGTGCGACATATGCGGCAAGACGTTTACGAAGCCATATCAAATGGAGCGGCACAAGCGTATCCATACAGGCGAACGGCCATACAAGTGTGAACAATGTGACAAGTCATTCGCGCAAAAGTTTACGTTGCAGCTACACCAGAAGCATCATACCGGCGACCGACCGTATCCTTGTCCGCACTGCAAGCAGTCGTTCACGCAGAAGTGCAATTTGCAGACTCATCTGAAACGCGTTCATCAATTGGTCACGCTCGACGTGAAGAAACTGAAAAACGGCCAGCAGATGCTAGGTACACTTCTGCAGGAAAATCAAGAAATGGACGCCAAATTGATGAATCTGGATGACATACTGGTGGTAGATTTTCTCAAATAA
Protein Sequence: MSANMLTEQNVIMEFTDSSDTVPIGFITTDDGHTLFAMGEHEDGTWEIMTTPITLMPQNNIMSSALIKTVDGNFVLHSPIFQLNVEGSSGTVMQQVNLLPIQQNASMITEQLKVVQNVNECAITEPLSIREDSSILLNKEENCKRQTEGQTTIDNYLKNKSISTAVHKKSPGRPKKTENTQSLKCDICGQEFTKQMLYRRHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNIGDPKCPECGRKYTRMASLKSHMLLHVKEENLFCTECEDAFSTKAQLDAHLKLHGEKWANEDVGVRKCKLCNKQFTQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKNFQKPSQLMRHIRVHTGEKPFKCTLCTKAFTQKSSLQIHARQHNGIRPHSCSLCSAKFGQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRVHSNPEEESADKSSAVNSAISSEADMRATVDSVISQLASLEAVVNNTADSGTLNAEQNDILQQALKNSGLPNKNEVVSKEIAEPKKTDSPTTYVTLLDKTAGNTSRKYHAIKQRCIGNVRWYVCSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACTSCNKTFACHSSLTSHTRLHMKPHKCSICSKLFNSSIILKNHMKCHMREKPKISPEAESLVSQVVLQEPLVISDAGNKISFAQVQSKQKQLYENAGATRPHECWVCHAAFRKVSHLKQHHRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCSICNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHIKRHKHELVQRQLEEQKTQEQKEQQPLRENKEAGSAALPEITLAEDMEVSFQPQMAPDFTQAFSDQFQNINAEKDKSFLLTNNTTAVTNQNLSVDTTNLGTSQTLHADETGTITLSHYSGDQTLTAESIREIEETLNQQLFNIDMNLGLANNLPKQIDETNTSSLNSREQPVLNIIYEHNKNLDSSGNTIFTSQFDSFDMSQITLQTDSEMDIGLNPTNTTSMSDILSKSIEGGNKQREEQRAIPVTTVDSIDPSAITKNAHLMVINPKDNCSELVNLSQVCPSKYSKVIAKTDTTNGLLEMQSTTEPERMPQKSNVISCESERNSLFMKNFQSPMQPETLISSGTNRSAKISEYNNLLECHICHRNDFTAERLKEHLESHCGSKLYECPKCSQRFHTNGGLSRHTKRLHTELKCTTCKKVLDNKSQLKHHSKMHSGVLKVVRVESNEKETISSSSRLPSIMTLDVPVNPDSSVSEKVLMDAVAERKSMDRVDENAGKKETKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCSKSFAVKCTLDSHMKVHTGKKTFCCHVCNSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMQKHAREHKGGAKRKPKHQKIAAVAEAAASLESIGNDSLDTSRTTTETMINSGEIAPPQTLDYSPLEHTEMNLGDTNHLPNQITFNHTDATTTILNNNSMLSLNDSNELVANLQFLLANGLVTIQTDDTMLTTQPGANGVAEVPTNMIELVGTNPFQETCTLGDANHQIVITSQVPSETTTTNANDTAIIQMNDCLPPVSIVHVQNQGTNISGEASKTKTSGQSATIACNSRAVTTGTAKTSTQSSRKECDICGKTFTKPYQMERHKRIHTGERPYKCEQCDKSFAQKFTLQLHQKHHTGDRPYPCPHCKQSFTQKCNLQTHLKRVHQLVTLDVKKLKNGQQMLGTLLQENQEMDAKLMNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280100;
90% Identity: iTF_00264457;
80% Identity: -