Basic Information

Insect: Camponotus floridanus
Gene Symbol: bab2
Assembly: GCA_003227725.1
Location: NW:612478-644450[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.2e-12 1.8e-09 36.6 0.0 1 39 387 426 387 430 0.90

2 4 3.1e-12 4.6e-09 35.3 0.1 2 38 442 478 441 483 0.89

3 4 4.1e-19 6.1e-16 57.3 0.0 1 45 496 541 496 541 0.97

4 4 7.4e-19 1.1e-15 56.5 0.1 1 42 548 590 548 591 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.2e-12	1.8e-09	36.6	0.0	1	39	387	426	387	430	0.90
2	4	3.1e-12	4.6e-09	35.3	0.1	2	38	442	478	441	483	0.89
3	4	4.1e-19	6.1e-16	57.3	0.0	1	45	496	541	496	541	0.97
4	4	7.4e-19	1.1e-15	56.5	0.1	1	42	548	590	548	591	0.97

Sequence Information

Coding Sequence: ATGGAGACAGATCGTTATTGGGGCGTGCACTACAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGGACAACTACCAGTCGAACATGACGTCCGTGTTTCACCAGCTCCTGCAGACCGAAGCCTTCGTCGACGTCACCCTGGCATGCAACGAGGCCTCGTTAAAAGCGCATAAGGTGGTGCTGTCGGCCTGTAGTTCCTACTTTCAAAAACTCCTTCTGTCGAATCCCTGCAAACACCCGACCATCATCATGCCGAAGGACGTGTGCTTCAACGACCTCAAGTTCATCATCGAGTTCGTCTACCGCGGGGAGATCGACGTCTCACAAGCGGAGCTTCAGTCGCTTTTGAAGACGGCCGACCAGCTAAAGATCAAGGGCCTGTGCGAGGAGAACAGGGACGGTCCACAACCCGTAAGCCTGAGCTCGCCGCCGAGGGAGTCCGGCACCCCGAGATTAAACTACACGAAGCTGAAGAAGCACCATCAGCGGTACAAGCGACCCAGAATCGAACGACCCACGTTCGAGCCACGCGCCACCGATCCACTACGACACTACGAGCGCTACAAAGAGGAAGAGCCGATTACAATTAACGATTATAGCTGCGATAACAAAGAGAACCACCGGGATTGGCAAGCCGAAGATGAAGAGTGCACGGAgacagcaacagcagcagtaGCACTGGAAACTTGCCAGCgtaacaacaacaacaacaacaacggTAACGGCGCGAGTAACAGTAACAACGGGCTAGGTCATTATGGCCATCATCCGGATCCTGGAGAGGTCGATTTACCCCCCGAAACTCAACCTACACCACCAAGCGCCACCTTAGTCGGCACTACCATTACCCATCTAAGAGATCCGGATCATCATTCTACAGAGATTCAGAACTGCGACAGTGAGATCAAGATCAAGTTCGAGACGTTGCACACGATGGACTCTTCGGATACGATCGACATAGATAGCCATATGTCAGATCGGGCTAGCGTGAGTTCGAAAAACGCTGTCGACAGCGATAACATGATGATGATAACGCCAGAATTGCTCGGACTGATGCCATCAGGAAGCTCTGGCCAGTCAGACTCAGGCGACAACAATTCGAGGGGACACTCTGGACAGTCTAGCTCGCATCATCACGGTTCAAAATCGTGGACGCAAGAAGACATGGACGCGGCTCTGGATGCATTGAGGAATCATAATATGAGTCTGACAAAAGCATCGgCAACATTCGGAATTCCCTCGACGACTCTATGGCAACGGGCACATCGACTAGGCATCGACACGCCGAAGAAGGATGGTCCCACGAAATCCTGGAGCGACGAAAGTTTGAATAACGCTTTAGAAGCTTTACGTACTGGCACCATTTCGGCTAATAAAGCATCCAAGGCATTCGGTATACCTTCTAGTACATTGTATAAGATCGCGAGAAAGGAAGGAATCAGACTGGCCGCGCCGTTCAATGCAAGTCCCACGACGTGGACGCCCGCCGATCTGGATCGCGCTTTGGAAGCGATAAGATCTGGCCAAACATCTGTGCAAAGAGCGTCGACAGAATTCGGTATACCTACGGGGACGTTGTACGGAAGATGCAAGCGAGAAGGAATCGAACTTAGCAGGAGCAATCCTACACCGTGGAGCGAAGATGCTATGACTGAAGCTCTCGAGGCTGTCAGATTAGGGCACATGAGCATCAATCAAGCAGCCATCCACTATAATCTGCCGTATTCGTCATTGTACGGGCGTTTCAAGAGAGGCAAGTACGAAGAACCCGTTGTTGGTGATATCTCACAGGATGGCAGCAGTCCACATTTTCATCAAAGTCCCAATCAGAATCACTCGTCCGCCCTTCCAGATCAAATGCCTTATCCGGGCAGCTGA
Protein Sequence: METDRYWGVHYSGGMAGQHYCLRWDNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPKDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEENRDGPQPVSLSSPPRESGTPRLNYTKLKKHHQRYKRPRIERPTFEPRATDPLRHYERYKEEEPITINDYSCDNKENHRDWQAEDEECTETATAAVALETCQRNNNNNNNGNGASNSNNGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSEIKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAVDSDNMMMITPELLGLMPSGSSGQSDSGDNNSRGHSGQSSSHHHGSKSWTQEDMDAALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARKEGIRLAAPFNASPTTWTPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDISQDGSSPHFHQSPNQNHSSALPDQMPYPGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01520386;
80% Identity: iTF_00265120;