Cflo009686.1
Basic Information
- Insect
- Camponotus floridanus
- Gene Symbol
- usf1
- Assembly
- GCA_003227725.1
- Location
- NW:1317198-1321291[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.25 1.5e+03 -1.1 0.0 11 28 140 158 139 168 0.71 2 2 3.8e-08 0.00023 20.7 0.6 17 46 220 249 217 256 0.93
Sequence Information
- Coding Sequence
- ATGGACATCTTGGAGCAGCAGCTCGAGCAGCAGGATGTCAGcgTCGTTAAGGACGACGGTGGTGGCACGGGGATCGTTATAGAGGAAGCAGAGATTGTGGATTGCGAAGGGGAGCCTATTGGGGAAGATGAAATGCGTTATCAAGAAGCCTTAGCGTATCGAGTTGTCCAAGTGAATGGCACAACAGCCATACAGCCAACCAATGAGATAGAGCTACCAGTGTCGCAACCAGGAAATAATACTGTACAGGTTTTAACGTCACCTTTAAATGGACAGTTTTATGTTATTGGGAATGCCAATGATGTCTTTACTACTGCGCAAACATCCAGATCTCTGGTGCCAAGAGCAACCACGCTGCAAATAGAAACTCCAAGAAATTGCACTAGTGGCTTGAAAaagAGAGACGATAGGAGGAGAGCGACACATAATGAAGTCGAGCGTCGACGTagagataaaataaacaattggATTACAAAGTTGGGTAAGATCATTCCTGATTGCAATGCTAGTACTAACACTACTGGTACTAGCAGCAATGGAGAAGGAAAAACCAACTATGAAACTCAGAGCAAAGGAGGTATTTTAGCAAAGGCCTGTGAATATATAGGGGAATTGCGTGTGGCTAATCAAAATTTGGGTCAATGCCTGCGAGATAATGAGAAATTACGACAAGAAATTACAACACTGAAACAGTTAGTCACTCAATTAAAACGCGAAAATCATCAACTCAGATCACAAATATCATCCTCATCGGCCACTAATGTCGACGTTGTACATTTAAGCCCTTAA
- Protein Sequence
- MDILEQQLEQQDVSVVKDDGGGTGIVIEEAEIVDCEGEPIGEDEMRYQEALAYRVVQVNGTTAIQPTNEIELPVSQPGNNTVQVLTSPLNGQFYVIGNANDVFTTAQTSRSLVPRATTLQIETPRNCTSGLKKRDDRRRATHNEVERRRRDKINNWITKLGKIIPDCNASTNTTGTSSNGEGKTNYETQSKGGILAKACEYIGELRVANQNLGQCLRDNEKLRQEITTLKQLVTQLKRENHQLRSQISSSSATNVDVVHLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01119990;
- 90% Identity
- iTF_00263989; iTF_00264729; iTF_00279685; iTF_00729782; iTF_00280380; iTF_00868487; iTF_00867108; iTF_01244938; iTF_00729005; iTF_00730450; iTF_00109544; iTF_01254518;
- 80% Identity
- iTF_00264729;