Basic Information

Insect: Camponotus fellah
Gene Symbol: -
Assembly: GCA_030586385.1
Location: JAPIVC010000683.1:1792009-1794587[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0028 0.59 12.1 4.1 2 23 315 337 314 337 0.95

2 14 8e-05 0.017 17.0 0.3 1 23 343 365 343 365 0.98

3 14 4.5e-06 0.00094 20.9 2.6 1 23 371 393 371 393 0.96

4 14 0.00018 0.037 15.9 3.0 1 23 402 424 402 424 0.97

5 14 2.5e-05 0.0052 18.6 1.5 1 23 430 452 430 452 0.98

6 14 3.5e-06 0.00072 21.3 1.6 1 23 457 479 457 479 0.96

7 14 0.0035 0.73 11.8 4.0 1 23 485 507 485 507 0.99

8 14 0.00019 0.039 15.9 0.2 2 23 527 548 526 548 0.97

9 14 2.7e-05 0.0057 18.5 0.7 1 23 554 577 554 577 0.97

10 14 0.0022 0.45 12.5 2.1 1 23 583 605 583 605 0.96

11 14 0.00087 0.18 13.8 3.4 1 23 611 633 611 633 0.98

12 14 8.4e-06 0.0018 20.1 3.4 1 23 639 661 639 661 0.98

13 14 3.8e-07 8e-05 24.3 0.8 1 23 667 689 667 689 0.98

14 14 0.00012 0.026 16.4 1.3 2 23 695 716 694 716 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0028	0.59	12.1	4.1	2	23	315	337	314	337	0.95
2	14	8e-05	0.017	17.0	0.3	1	23	343	365	343	365	0.98
3	14	4.5e-06	0.00094	20.9	2.6	1	23	371	393	371	393	0.96
4	14	0.00018	0.037	15.9	3.0	1	23	402	424	402	424	0.97
5	14	2.5e-05	0.0052	18.6	1.5	1	23	430	452	430	452	0.98
6	14	3.5e-06	0.00072	21.3	1.6	1	23	457	479	457	479	0.96
7	14	0.0035	0.73	11.8	4.0	1	23	485	507	485	507	0.99
8	14	0.00019	0.039	15.9	0.2	2	23	527	548	526	548	0.97
9	14	2.7e-05	0.0057	18.5	0.7	1	23	554	577	554	577	0.97
10	14	0.0022	0.45	12.5	2.1	1	23	583	605	583	605	0.96
11	14	0.00087	0.18	13.8	3.4	1	23	611	633	611	633	0.98
12	14	8.4e-06	0.0018	20.1	3.4	1	23	639	661	639	661	0.98
13	14	3.8e-07	8e-05	24.3	0.8	1	23	667	689	667	689	0.98
14	14	0.00012	0.026	16.4	1.3	2	23	695	716	694	716	0.97

Sequence Information

Coding Sequence: ATGAATGTCGAGATAGATGAATATCATGATATCAATATCAGATTTACCAATTTGTGCAGACTCTGTGGTGAATCTGCTTTGGATGGGATAGATATCTTTGCAGCCAAAGGTATagagtttaaattaaaagaaagaataaatttgcatatgcCTATTTCAATCGATAGAGAAGATTCGATGCCACACAAAGTATGCATTGATTGTTGCAACAAATTGGAAATTGTGCACTCACTGGTTGTTTCATGTTTACGAACTGATATACGGATGAAAAGATTcctaaatattgaaaaacagtcaaaatatgaaaataagtacaaTGCATTAATTGATGAATGTTCATCAGAAATTGCTCAAGAGATGTGTACAGATGATAATACACAtccttttacatttattactaataaaatgGTAAACTCTTCAACTTTGAAAGAATTAGGGAATGGTGTATGTTCTGAAATACAGAAACATAACTTTCAGAGCATTGCAAAGAGTATTGCGTCATCAGAATTAAATACTCTGATCCAAACTTGTACAGAAGGTAACAGCAAAGCTACTGAGATCacagaaaaaatatcacaaattcaACAAGATAAAATCCGCAATGAAAATCATAGCATTTTATGCTTGCAATGCCAAACTTTATGCGATACacaggaaatatttgaaaatcataaaatattttgtaataagaaAAAGGATATTCCTAAACACACAACTATATCTAGAACTACAGAAAATGAAAAGTATAGAAATGAgcaaattaactttaaaataaaaaattctcagaCATTCAATAAAGACTGTGAAAGCAAGCAAGTAATTAGTAAAGCTAAAATGTATGAAACAATTCATTGTGCTATTTGCAAACAAACATTTAAATGTCAACAGGATTatgataatcataaatattttcatgaaaattttaccacagaaataaataaaagatgtggtcattgtaaaaaagtttatcaTAATAGAAAAGATTTGTTAAATCATATTATGGAATCGCATGAGGGGCGATTATTATTTCAGTGCTCTACATGTGATAAAATGTACGAGAAGTGGTCTAGCTTGGATATTCACGAGGCTACTCACAGAATAGATAAGCCATATCTTTGTGATCTATGtggaaaaagttttaaacATTCCAATAATTTGAGAGGTcataaaagaattcatttgGATGAATCTATAAAGAAGAGACACATGTGTGAAATCTGTGGCGATGCATTCAGATCAagATTTCATTTACGAGAACATATGAATCAACATGATGGCAACAGACCCTATTCTTGTGAACAGTGTGGAAAAGCCTTTTACAAAAGGATTCAATTACGGCAACATAAATTATCGCACGGATCCAATAGGCATGCATGTTCGATTTGTGGCGCGACATTTAATCGCAGAGGAAACATGAATACGCATATGAAACGACATAATGCAATTGGAGCATATACATGTAGCGTCTGTGCTTATAAGTGCAAATCTATGAGCGAATTGAAGATACACAGGAAAAAACATACCGAGGAAGAAATAATAGATAGCatcaaaaagaaatgtaatgaCAAGGAGATATGGCGATGTAACATCTGCAACAAAATATTCCCAAAGCGCACTGTTCTGATAAATCACGAACGCGTACACGGAGACGATAAATTATACGAGTGCGACGAATGCGGTAAAAAATTAGCGAGTAAGAGCTCGTTGATGTATCACAAAAAATCGATGCATCTAAGAGAGAGACCGCATATGTGTCATTATTGTGGAAATTCGTTTGTTTCGAAAGAAGCGCGATTGATTCACGAAAGAATACACACTGGAGAACGTCCGTATATCTGCAAGGTTTGCAATATGCGCTATAGATGTTCCAGTAATCTCAGCCAACATATGAAGATCCACACAGGTGTCAAGCCACACAAGTGCCATTATTGTAGCAAAGATTTTACGCGCAAAGGCGCGCTAATTGTCCACGAGAGAATCCACACGGGTGTTAAGCCGTATCCTTGCGAGACTTGTGGTAAAAGTTTTTCGCAAAAGAATGACATGTTGAAACACGCCAGAACACATAATGGCAAATTAATGCAGTGTAACCAATGCAACGAAATCTTCAAACGGAAAAAAGATATGTTAAACCATATTACAATGCATAAACAAGATATTTCGATGATTTCAAACTATGTCAATTCGCCGTCACATGTTTCTTAA
Protein Sequence: MNVEIDEYHDINIRFTNLCRLCGESALDGIDIFAAKGIEFKLKERINLHMPISIDREDSMPHKVCIDCCNKLEIVHSLVVSCLRTDIRMKRFLNIEKQSKYENKYNALIDECSSEIAQEMCTDDNTHPFTFITNKMVNSSTLKELGNGVCSEIQKHNFQSIAKSIASSELNTLIQTCTEGNSKATEITEKISQIQQDKIRNENHSILCLQCQTLCDTQEIFENHKIFCNKKKDIPKHTTISRTTENEKYRNEQINFKIKNSQTFNKDCESKQVISKAKMYETIHCAICKQTFKCQQDYDNHKYFHENFTTEINKRCGHCKKVYHNRKDLLNHIMESHEGRLLFQCSTCDKMYEKWSSLDIHEATHRIDKPYLCDLCGKSFKHSNNLRGHKRIHLDESIKKRHMCEICGDAFRSRFHLREHMNQHDGNRPYSCEQCGKAFYKRIQLRQHKLSHGSNRHACSICGATFNRRGNMNTHMKRHNAIGAYTCSVCAYKCKSMSELKIHRKKHTEEEIIDSIKKKCNDKEIWRCNICNKIFPKRTVLINHERVHGDDKLYECDECGKKLASKSSLMYHKKSMHLRERPHMCHYCGNSFVSKEARLIHERIHTGERPYICKVCNMRYRCSSNLSQHMKIHTGVKPHKCHYCSKDFTRKGALIVHERIHTGVKPYPCETCGKSFSQKNDMLKHARTHNGKLMQCNQCNEIFKRKKDMLNHITMHKQDISMISNYVNSPSHVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01077664;
90% Identity: iTF_00265184;
80% Identity: -