Basic Information

Insect: Camponotus fellah
Gene Symbol: -
Assembly: GCA_030586385.1
Location: JAPIVC010000779.1:3367055-3372484[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.1e-12 6.5e-09 36.8 0.0 1 39 308 347 308 351 0.90

2 4 2.9e-12 1.7e-08 35.5 0.1 2 38 363 399 362 404 0.89

3 4 3.8e-19 2.2e-15 57.5 0.0 1 45 417 462 417 462 0.97

4 4 7e-19 4e-15 56.7 0.1 1 42 469 511 469 512 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.1e-12	6.5e-09	36.8	0.0	1	39	308	347	308	351	0.90
2	4	2.9e-12	1.7e-08	35.5	0.1	2	38	363	399	362	404	0.89
3	4	3.8e-19	2.2e-15	57.5	0.0	1	45	417	462	417	462	0.97
4	4	7e-19	4e-15	56.7	0.1	1	42	469	511	469	512	0.97

Sequence Information

Coding Sequence: ATGTTCGACGTCGCCGCCGCCTCTTTCGCCGTCCGTCGAGATGAAATTGCACCGCCGCCGGGCGGAACGAGATGCCGGGAACGACGATCGCTTTTGAAGACGGCCGACCAGCTAAAGATCAAGGGCCTGTGCGAGGAGAACAGGGACGGTCCACAACCCGTAAGTCTGAGCTCGCCGCCGAGGGAGTCCGGTACCCCGAGATTAAACTACACGAAGCTGAAGAAGCACCATCAGCGGTACAAGCGACCCAGAATCGAACGACCCACGTTCGAGCCACGCGCCACCGATCCACTACGACACTACGAGCGCTACAAAGAGGAAGAGCCGATTACAATTAACGATTATAGCTGCGATAACAAAGAGAACCACCGGGATTGGCAAGCCGAAGATGAAGAGTGCACGGAgacagcaacagcagcagtaGCACTGGAAACTTGCCAGCgtaacaacaacaacaacaacaacggTAACGGCGCGAGTAACAGTAACAACGGTGACATGTTCTGTCACACAGGGCTAGGTCATTATGGCCATCATCCGGATCCTGGAGAGGTCGATTTACCCCCCGAAACTCAACCTACACCACCAAGCGCCACCTTAGTCGGCACTACCATTACCCATCTAAGAGATCCGGATCATCATTCTACAGAGATTCAGAACTGCGATAGTGAGATCAAGATCAAGTTCGAGACGTTGCACACGATGGACTCTTCGGATACGATCGACATAGATAGCCATATGTCAGATCGGGCTAGCGTGAGTTCGAAAAACGCTGTCGACAGCGATAACATGATGATGATAACGCCAGAATTGCTCGGACTGATGCCATCAGGAAGCTCTGGCCAGTCAGACTCAGGCGACAACAATTCGAGGGGACACTCTGGACAGTCTAGCTCGCATCATCACGGTTCAAAATCGTGGACGCAAGAAGACATGGACGCGGCCCTGGATGCATTGAGGAATCATAATATGAGTCTGACAAAAGCATCGGCAACATTCGGAATTCCCTCAACGACTCTATGGCAACGGGCACATCGACTAGGCATCGACACGCCGAAGAAGGATGGTCCCACGAAATCCTGGAGCGACGAAAGTTTGAACAACGCTTTAGAAGCCTTACGTACCGGCACCATTTCGGCTAATAAAGCATCCAAGGCATTCGGTATACCTTCTAGTACATTGTATAAGATCGCGAGAAAGGAAGGAATCAGACTGGCCGCACCGTTCAATGCAAGTCCCACGACGTGGACGCCCGCCGATCTGGATCGCGCTTTGGAAGCGATAAGATCTGGCCAAACATCTGTGCAAAGAGCGTCGACAGAATTCGGCATACCTACGGGGACGTTGTACGGAAGATGCAAGCGAGAAGGAATCGAACTTAGCAGGAGCAATCCTACACCGTGGAGCGAAGATGCTATGACTGAAGCTCTCGAAGCTGTCAGATTAGGGCACATGAGCATCAATCAAGCAGCCATCCACTATAATCTGCCGTATTCGTCATTGTACGGGCGTTTCAAGAGAGGCAAGTACGAAGAACCCGTCGTTGGTGATATCTCACAGGATGGCAGCAGTCCACATTTTCATCAAAGTCCCAATCAGAATCACTCGTCCGCCCTTCCAGATCAAATGCCTTATCCGGGCAGCTGA
Protein Sequence: MFDVAAASFAVRRDEIAPPPGGTRCRERRSLLKTADQLKIKGLCEENRDGPQPVSLSSPPRESGTPRLNYTKLKKHHQRYKRPRIERPTFEPRATDPLRHYERYKEEEPITINDYSCDNKENHRDWQAEDEECTETATAAVALETCQRNNNNNNNGNGASNSNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSEIKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAVDSDNMMMITPELLGLMPSGSSGQSDSGDNNSRGHSGQSSSHHHGSKSWTQEDMDAALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARKEGIRLAAPFNASPTTWTPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDISQDGSSPHFHQSPNQNHSSALPDQMPYPGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01520386;
80% Identity: -