Basic Information

Insect: Campoletis sonorensis
Gene Symbol: ZNF341
Assembly: GCA_013761285.1
Location: JACEOJ010000101.1:112053-116099[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.12 9.5 7.1 4.4 1 23 45 67 45 67 0.98

2 13 0.00014 0.011 16.3 3.0 1 23 233 255 233 255 0.99

3 13 2.1e-07 1.7e-05 25.1 0.4 1 23 261 283 261 283 0.98

4 13 0.029 2.3 9.0 1.2 1 23 308 331 308 331 0.96

5 13 0.37 31 5.5 0.4 1 23 337 361 337 361 0.95

6 13 1e-05 0.00083 19.9 0.8 1 23 366 388 366 388 0.98

7 13 0.0033 0.27 12.0 3.9 1 23 400 424 400 424 0.91

8 13 0.00028 0.023 15.3 2.0 1 23 426 448 426 448 0.98

9 13 7.1e-06 0.00058 20.4 0.2 1 23 454 476 454 476 0.96

10 13 1e-05 0.00083 19.9 0.4 1 23 482 504 482 504 0.98

11 13 0.011 0.89 10.3 0.3 5 23 519 537 510 537 0.79

12 13 0.014 1.2 10.0 7.0 1 23 543 566 543 566 0.93

13 13 0.0012 0.095 13.4 1.9 2 19 569 586 568 589 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.12	9.5	7.1	4.4	1	23	45	67	45	67	0.98
2	13	0.00014	0.011	16.3	3.0	1	23	233	255	233	255	0.99
3	13	2.1e-07	1.7e-05	25.1	0.4	1	23	261	283	261	283	0.98
4	13	0.029	2.3	9.0	1.2	1	23	308	331	308	331	0.96
5	13	0.37	31	5.5	0.4	1	23	337	361	337	361	0.95
6	13	1e-05	0.00083	19.9	0.8	1	23	366	388	366	388	0.98
7	13	0.0033	0.27	12.0	3.9	1	23	400	424	400	424	0.91
8	13	0.00028	0.023	15.3	2.0	1	23	426	448	426	448	0.98
9	13	7.1e-06	0.00058	20.4	0.2	1	23	454	476	454	476	0.96
10	13	1e-05	0.00083	19.9	0.4	1	23	482	504	482	504	0.98
11	13	0.011	0.89	10.3	0.3	5	23	519	537	510	537	0.79
12	13	0.014	1.2	10.0	7.0	1	23	543	566	543	566	0.93
13	13	0.0012	0.095	13.4	1.9	2	19	569	586	568	589	0.94

Sequence Information

Coding Sequence: ATGGCCCAATCTATATTCGACGCCTTAACAGGGGTCTCACTTGACAGTTCAACCGTGCAATCTCTGCTCGAAACTCCGACTCTAATAAGCGAAGTTGAGCAGTCAGCTATTGACCAAGACGAGGAGGATATTTTTCAATGCGGCAAGTGCAAAAGTCAATTTACATCTTTGCACATGTTTTTACTGCACAAGAGAGAACACCTGAAAGTACAAGAGCAAACTGTCGATCTGAGTCAGTATTTGGTCAACGAGGATAGCCAAGTCGACGTCAATGTACAAGATCCGTGTCAAAATGCTATTCCCTACGATCCACAGGAAGGATTCGTTCAAAGCGATCAACTTGCCGGGTCCATTATACTCGCGGAAACCGATATGTTGTTCAGCATCGACCAAGAAGGTGCAAATTATCTAAGCCAAGAGTCAGGTTTTGGTGTACCTATAATTCTCAGTGCCGAAAGTCTCGAGGACGCTTTTTCGGATCCAGCTGAAAATGCAGAAAGCGATGCATTGATAAACGAAGCTGAAGAAGTGGGCCAAACTTTGCACAACGATCTGAATCAGAATGAGACTGTTTTTGAAGTCTCTTCGAATCACGTTATGGTCCCGATAGAAAATGGATTGGAAAATGTTATTGATAATCATGACGAACAAACGGAAGAAGAAGACAGCAGTGTCAGCCAAATGCAAAATTTAAAGTACAAGTGTGGCTATTGCAACAAACAGTTTGCCAAGAAATTTTATTGGCAACAACACGAGCGTTCACACACCGGTGAAAAACCTTATCAGTGTGTAGTCTGTGGCAGAGCATTTGCACAAAAATCCAATGTCAAAAAACACATGTCCTCGCACAAAGTTTGGCCAGGAACTGCAATACACTCTCTACCGCCGGAGGCACCACCGGACGGAAGTATCGATCGTACCTATCACTGTCAATTCTGCAGAGAGATTTTCGAATCGTACAAAGCCCTGAAGGGTCACCTAATAGTTTCTCATTTGACGCTAAAAGTTTACAAATGCGTTCAAAGTAGCTGCAGCATGATGTTTGCCGAATTGGACGATTTTCTCGAACACACCAAGAGCCACAAGCGTTCCGAGTACAGATGTCACGTGTGCGGCGAGGTTTTTAACACCCTCTCTGATCTTGGACTTCATCAGTACTCTCATTCCGTCCAGAAGCAAAAAACTACGGAAAAGTATTATTGCTGCTCGATTTGTAAATCATCATTTTCCAATCTTGAGGCGTTGCAACATCATACGGAAACCACCACCCACGATTACGCCTGTCCTCACTGTGGCAAAAGCTTTTTGATCGAAAGATTTTTACGAAGACACCTTAAAACTCACGTCTCTTCGGCTCGTTTTGCATGCGAAGATTGCGGCAAAGCTTTTAAAACCGAACAGTATCTTGCTAATCATAAGTTAATACACAGCGAAGAAACACCATTCACTTGCCCGCAATGTCCTGCCAGATTCAAAAGAAAAGATCGCTTAGGACGTCACATGCTCATTCACGATTTAACGAAAAGGCTCAAATGTCCGTTTCGGGGATACTTGGGCTGCATGAGCGAATTCTCACGCCCGGATAAACTCAAAAGACATCTTTTGACTCATAGTAACATCAAACGTTTCAGCTGCAGTCATTGTAATCGTAATTTTCATCGAGCCCAAGCTCTCAAGCACCACGAACTGAACAAACACAATCTCAAGTGTGACATATGCTCACATGCATTTAAAACGAAGGATCAACTAATAACGCACAATTGTGACCAAGCAACAGAAACAAAAAAACACACGAGTTCGCAACTTCCAAAAAAAGCTTCCGGAACTTTCAAGCCGCGAAAACCGACGCCAAAGAGACAAATGAAATCGGCGAATGGCATTACGGAAAAAGAAAAATCAAAAACTGACGAAATGCAAAAAAAGATTATCTTGGAAGATATGAGAATGAGCGACTACGAAGACGAAGCGTGTGATAAGAGACTAGAAAATTTTACAATAACCCGAGAGATCGATTCAGCGATGGATTCTCTCATGGATTCTGAGTCGTCGGATTCAAACGACGTTAAGCCTGCAATCAGCGTTTTCTCGTCCGAACAAATCGACGGTGTCGCGTAA
Protein Sequence: MAQSIFDALTGVSLDSSTVQSLLETPTLISEVEQSAIDQDEEDIFQCGKCKSQFTSLHMFLLHKREHLKVQEQTVDLSQYLVNEDSQVDVNVQDPCQNAIPYDPQEGFVQSDQLAGSIILAETDMLFSIDQEGANYLSQESGFGVPIILSAESLEDAFSDPAENAESDALINEAEEVGQTLHNDLNQNETVFEVSSNHVMVPIENGLENVIDNHDEQTEEEDSSVSQMQNLKYKCGYCNKQFAKKFYWQQHERSHTGEKPYQCVVCGRAFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPPDGSIDRTYHCQFCREIFESYKALKGHLIVSHLTLKVYKCVQSSCSMMFAELDDFLEHTKSHKRSEYRCHVCGEVFNTLSDLGLHQYSHSVQKQKTTEKYYCCSICKSSFSNLEALQHHTETTTHDYACPHCGKSFLIERFLRRHLKTHVSSARFACEDCGKAFKTEQYLANHKLIHSEETPFTCPQCPARFKRKDRLGRHMLIHDLTKRLKCPFRGYLGCMSEFSRPDKLKRHLLTHSNIKRFSCSHCNRNFHRAQALKHHELNKHNLKCDICSHAFKTKDQLITHNCDQATETKKHTSSQLPKKASGTFKPRKPTPKRQMKSANGITEKEKSKTDEMQKKIILEDMRMSDYEDEACDKRLENFTITREIDSAMDSLMDSESSDSNDVKPAISVFSSEQIDGVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00798763;
90% Identity: iTF_00266672;
80% Identity: -