Cson015100.1
Basic Information
- Insect
- Campoletis sonorensis
- Gene Symbol
- -
- Assembly
- GCA_013761285.1
- Location
- JACEOJ010000088.1:83293-93047[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 8.5e-06 0.0007 20.1 1.0 1 23 239 261 239 261 0.98 2 31 0.0037 0.3 11.8 1.9 1 23 284 307 284 307 0.96 3 31 0.00027 0.022 15.4 0.5 2 23 314 336 313 336 0.96 4 31 0.00014 0.012 16.3 0.6 1 21 356 376 356 377 0.96 5 31 0.0024 0.2 12.4 0.2 2 23 494 515 493 515 0.96 6 31 0.14 11 6.9 0.2 1 23 521 544 521 544 0.92 7 31 0.00016 0.013 16.1 0.1 1 23 611 634 611 634 0.96 8 31 0.011 0.89 10.3 0.4 1 23 640 663 640 663 0.96 9 31 0.16 13 6.6 1.5 1 23 676 698 676 698 0.97 10 31 4.9e-05 0.004 17.7 0.9 3 23 743 764 742 764 0.96 11 31 0.047 3.8 8.3 0.7 2 23 832 855 831 855 0.93 12 31 7.6 6.2e+02 1.4 0.0 2 23 864 886 864 886 0.83 13 31 0.031 2.6 8.9 0.1 2 23 893 915 892 915 0.95 14 31 1.8e-05 0.0014 19.1 1.2 1 23 923 945 923 945 0.98 15 31 0.24 20 6.1 2.4 2 23 989 1012 988 1012 0.92 16 31 0.00029 0.023 15.3 3.3 1 23 1015 1038 1015 1038 0.97 17 31 0.019 1.6 9.6 0.7 2 23 1045 1067 1044 1067 0.95 18 31 0.0032 0.26 12.0 6.0 1 21 1130 1150 1130 1151 0.95 19 31 0.0037 0.3 11.8 1.8 2 23 1165 1186 1164 1187 0.93 20 31 0.29 24 5.9 0.6 1 23 1190 1213 1190 1213 0.95 21 31 0.011 0.93 10.3 0.9 2 23 1220 1243 1219 1243 0.93 22 31 4.2 3.4e+02 2.2 0.2 2 23 1251 1273 1251 1273 0.94 23 31 5 4e+02 2.0 0.0 2 23 1280 1302 1279 1302 0.87 24 31 0.16 13 6.7 3.0 2 23 1311 1333 1311 1333 0.96 25 31 3.1 2.5e+02 2.6 1.7 2 23 1339 1361 1339 1361 0.92 26 31 0.072 5.9 7.7 0.4 1 23 1432 1455 1432 1455 0.95 27 31 0.0071 0.58 10.9 2.8 1 21 1498 1518 1498 1519 0.94 28 31 0.62 50 4.8 1.4 2 23 1638 1660 1637 1660 0.94 29 31 0.13 11 6.9 1.2 2 23 1667 1689 1666 1689 0.97 30 31 0.95 77 4.2 2.5 1 23 1700 1722 1700 1722 0.97 31 31 0.036 3 8.7 0.1 3 20 1734 1751 1734 1753 0.94
Sequence Information
- Coding Sequence
- ATGGAGCCCTCCAAGGAACGCTACAACGAGCTCTGCAGGCTCTGCGCCTCTTACGACGCCGTCAAAATGGATATATTCGGTAATGAGGGGAAAAATCGTCAGCTAGTCGACAAAATACAAACTTGCCTGCCCTTCAAAATTGCCGAAGATGATCGGTTACCCAAGTGTCTGTGTTATCGATGTATGTACAATTTGGAAAATTTTTACGACTTCAGAACGGCCTGTGTTAATGCTGTTGCGCTTTTGGAACGATGTTTACCACCCGGAAGCAATGCTACTGGTAAACAAATGGAAAATGGAGGCGAGAATTATTCGGAATTGCGCTCGGAGCTCCTCAAGGAAAAAGAAAAAATGCCTATACTCATTCCCGAAGCCCCCATAGTTAATCCAAACGCGGCTCTTGGAACACCGCCGAGATTGAATTCTGACGGCGAGGGTGATCACGAGGTTGAAGAGATTCATAACGTCAGCGGGGCCGAAGAGGGTGTCGCAAAAGAATCAGTATTCGCAACAAACGCCAGCTTCGACGATGCGGACGATCGTAAATCCGACGAGTACGAAATGGACATGGAAACGAATCCAAGTGATTTTTTGGAAATGACTCCCATGGTTACCGAAGAATTGGACGAAACAAGTACAAAAAAGACACAAGCGTCGACGAAAACGAGAAACATGATGGAAACGTTTCAACACACTTCCGAGCAACACGAGGTATACGTTTGTTCGTTGTGTAACAAGGCTTTTAGTTCAAAAGGTCACTTATCCCTCCACGCGAGAATTCACGTTGGCGCGGGTGACGTTATCGGTGCCAAAGTTGTTACTGACGATCACACATCCTACAAGAGACCCTATCAGTGTGATCTTTGCAACAAATCCTATTCAACGGCGAAACATCGATGGGGACACGTATCAACGACTCATCGAGGTCATCCGGCGGTAACGTGTGCTTATTGTTCACGAATATATTCAACTCGTACGAATCTTGAAGAGCACATAAAATCTCGACACACGGGTCTACCACCGCCTCCTGAATTACCAGTTGCGTATGTGCAGCCGGATAATCGATACAGATGTAAAACGTGTCCAAAAATGTACACGAACGTGACGGATTTGAACAAGCACACGAGAGTATGCGCGGCCGATGTTGCAGCGAAAGATAAACAGCAGCAACAACGACCGATCAAAAAAATCTCTCGAAAAAACAAGTCTCGGGTGGATACGTCCGATATTTCGAGCAGCAGCAGCACAACTGACACCGAGGACGAGAGCAACAACGATTACAGAAACGCGGAAGCTAAACTGTCGAAAAATCCACAATTAACGATATTGAAACAGGCTCTGACGAAAGGTGGGGAAAATCTGAAGAGAGATTACGAGGATAGAAGGAATCAAGTGAGCGCTGGTAGCGGAAACAACAAACCTCCTGCTGCCAAAGTTGCACGAATTGAAAATAACGAGGGTCCGGCTCGAAAGAGATGGTACTGCGAGATGTGTCCGCAAAATTTCACGTCCGTCGACAAATTGAAACAACACGAAATGGTTCACGACGCGGAACGTCCTTACGTGTGTATTCTGTGCGAGAAGGATTTCGTGCTGAAGACATCGTTGAGCAGACACATCGTCTCGAGCCACGGAGTCGATCCGACTCCGATTCTCGAGAGCGACAAGTGTACGAAGAAGGGCGCGTTGGCACAATCATGGCGAAAAAAATTGATTAAAACAGAGGAAGTAAGAAGTGGTGGTGGCGGTCGGAAGAGAGAAGCACCGAGCGATTCTTCGGAGGATGCCGACAGCTTCGCTCACGGTAATATGGTCGAAATCGAAACGGTATTCGTGTGTGAAATATGCACACGAGACTTCAACGATCGCGCATCTCTCTGGCTTCACATTCGTGCCACCCACAAAGAATTTGCGGCGTTTGCTTGCGGAGTTTGTCTGAAAATATGTTCGGACAATGCTCAGCTGTTGAATCACGTGAATATGTATCACGGTGGCTCGAAGCTCTTGGTTTCGGAGCAAAGGCGATACAGTTGTACGATATGCGGCAGGCAACACGATTCTCGAAAGAAATTAATCACTCACGTATCGATACACAACGTCGATCCGGGCTACGATCCAGCCAGTTTCGTTCAACTTAATGCTAACTATTACAACGAAAGTTTTAACAGCAACGAGGTCAATGATCACTTGATGGACTTTGACCCCGAAGACGGGGACAAAGTCGACTGCTATATTTGTTACAAGTCTTTTCCAAACGAAGATCATCTCATTCGCCATCAACGAAACGCTCACAAGTCCGAAGGTGTTGTGCCCAGCAGCCAAGTAACGATACCGAGCAGTAACGGGCCTGCCGCTGTTGCCGTACCTGGACTCAATGGAACCAAGGCGCAGTACCATTTATTCTTTGTTTGTGAATTGTGCGGGAGCTCCCACCCAAGCAAGTGGGAACGTTGGCTCCACGTCAGTGCCAATCACAGTGAAGACCCATCGATGAGATGCGAACGAGAGGATTGTGGCAAGATCTTTGCGACAAAGGCACTTCGAAACGAGCACGCGCAGCACCATTTGATTCAAGGATCATCGCCAAACACGTGCGAAGTATGCGGCAAGCTGTGGGGAAGTCGTGTCGATTATTGGAAGCACGTAATGGGAGTGCACTCGGACACGGTGCCATTGATTTGTGGGGTTTGCCTCAAAGTATTTCCCGACGTCGCCAAGCTCAGTAGTCACGTTAAAACGAATCACTGGCCGCTAACGAACGGTGACTTCAGTTGCGACATTTGTGGCAGGCCGTATTCCAACAAATCGAAAATGTCGAGGCATCGAAAGATTCACGGGGTCGTGGAGGTCGACCCGGCGTTAGGGAACAGCGTCGATGCGGGCGGCCGGGCTCCGGCTGCTGGGGACATACGCAACGACCCGGGCGCTTATTATGGAGAAAAGAGTCCGAAGGAAGTTCAACTGACGTGCGAATTGTGCACGGATTTGAGCTTCGAAAATTGGCAATCGTTGTGCCATCATCGACGAGTCATTCATGGCCTCTTTCCCTGCGATCTTTGCAACAAATGTTACGGACGAACTTCTCATTTGTGGAAACACGTTAATCGAGTTCACAAGGGACACGAGGACGTGACTTGTCGATATTGCATGAAAACGAGCGCCTCCAAGGACCATTTGATGGCGCACATTGCAAAAATTCATCGTTACGAACCGGAGAACAAGCTCGAAATGATGATGGTTGTGGGAGAAGCTGCGGCAGCGGTTACGGGAGAGGAGGAGGACGGGGAAGAGGAACACGAGCCAAGAAGGAGAAGAAGAAGAAGAGGCGATGCGTCGAGTCTTGGAGCGATTGGCGAGGACGACGAGGCTGGTGTCGGTGCCGGTGTCCATCATTGTGACAAATGTCAAAAGAGTTTCCACAAACGTTACTTGCTGCGACGTCACATGAAAGGTTGTCAAAATTATCGAAAAGATCCTGGCGCGTTGTTAACTCGCTGTCGAGCTTGCGAGAGAATATTCAAAGATCGCGCCAGTCTCCAGAAACACATTGAGAATCATCACAGCGAGTACACGTGTCACTTGTGCAACGAAGCGGTCACCTCCAAGCTCGGTATAATGACTCACAATCGCGTTAATCATCTTCATCATCCGGATCTCACTTGCGAGAATGGCAACTGTCGAAAATTATTCCGCACCAAGGAAGACCTCGAGTCTCATCGAAAGGATCACAAGTATCACAACACCCCGAACGTTTGCGATTTTTGTGGCGATACCGTTGAAAATAAGCTGAAATTGAAGATGCACGTTTTGTCGCTCCACCGAAACGAAATTGGGGTCTCGTGCGGCGTCTGCCTCATTCCCATGAAAGATCCAAAGGATCTTAAAAAACACGTCGAGGACGAGCACGAGGGCGTACTCCACAAACCAAACACCTGCCAAGTTTGCGGCAAAAGATACGCCTCCAAGTGGAAAGCTTTTGATCACACGAAAAAATGCCACGGCAAAGTATTCCGCACTTGCAAACAATGCCTCGCGGTCTTCACCACCGACGCCGATATCCGTCATCATTACGAACACGTCCACAACGTACCCAAGGATCAATTGGCTGGCTTTGAAAATCGTCTTCTCGACTCTCGAACCGAAGATTGCGATGCGATCGTCAAAGACGAGCCCGAGGATTACGAATACGAGGTTCAGCGTGAAACCAACCCCGCGGTTGCTCTTCGCGACGATAATGACGCGTACGATTTCAAACGCCGGAGAGGAAGTAGCGGCAACAATCATCGCCACACCCACGACTGTGAAATTTGTCCCGAGATATTTCTCAACCGGGAAACGCTCTCGGATCATTACAGAAACGTTCACAACACCGATCCCGAGAGAATGTTCAAGAGGATTAAACTGGAGAGGGGCGAAGGAGGAAGATTCACGAGCACCAGCGTTCCCCCGAAAGGTTCATCCAAAAAAATGATGATGCGAGAGCGCGAAAATTTCGAGTGTCAAAATTGTTCCAGGCAATTTTGCACGAAAAGCTTGTTTTGGAATCACACGAACGTTTGCACCAGGCGCAATTCGGCTAATCGGGAAGATCCGAGATCGTCCTCGTCGTTCGGTCAAAGCTCCTCGATTCTCGAGGCTCATCTTAAAAACAACAACAGAATCAAGAGAGAACCCAGCGACATTCCGGGTCTCGATGAAACTAATTTGAATATTCCTGACTTTAATCTCTTTGAAGACATAAATATGCAGCTCTCGGAACAAAAACCCATTCCGAATTTGATGCCGCTGTCGGAATTGAGGCGCGCGGGAGGCCCCGGCGTTCTTTTGCCTTCCTCGAACGAAAAATCGTTGAGAAAAGACTCGAGAAAGGACTCGAGGAAGGTTTACGACGAATCTACCAACACCGTTTGTATTTGTGAAGTTTGTGGCAAACAGTGGCCAGCGAAAAAACATCTTTGGCAACATTTGATACGTTTCCATCGAGCCGAGGCTGCTGTTACTTGTGGAGTTTGTCTCAAGCTTTGCACTAATTACGAACAATTGGGACAGCATCTCCGGACGACCCACGAGTCCGTATTGTCTCGAGAGGGCAATAATTTTACTTGCAAAACGTGCGGACGTTATCACAACGCGAGAAGCAAATTGTTGTTGCACATGAGCATCCACATAAACAATGACAACGGTGGTGGGACTTGTTGGTGTCCAAAGTGTGAGAGGACCTTCGAGAGTGAAGAAAAACTCAACGAGCACGCTTCAATTTGTGACAAAAGCCGGCCAATCTTCGAGGAACACAGCGCCGACGTTGACACGGATCGCGAGACCAAAATCGAGGACGATAAAGGAAGTTTGATCGGCGACGGTGCTTCGCTCACGGGCGAGGACGAGGAGGAGGTTGATTTCTCGGATCGACGAGTACGAAGCAACTCTGAAAATACAGAAAATTCAGAGAGCAGCCACGGCGGTGCTCGGTCGAACAGCGAAAGTGACAGCAGCGAAGAGGAGGAAGAAGACACCGAGTCTCGGACAAATAGCCGAGCGACTGGCCCAGCAACTTGTCATTCCGACAGCGAGGAAGAAAACGATTCTAGTGAAAAAAGTCCCAATGACATTCCTTCCACGGACGGACTCAAGGATGGCAAAGACAGCAGTGAAAATGACTCAAACGTCAGGAAAAACGAGACTAACAAATTGGCTACGAAGCTTCCTGAGACGAAGCAAGAAGACGAAGACGTGGAGGAGAAGAAAAATAAGGATGAATCGATAGAGCCACCGAAGACACAAGTCGATGAAGAAACGGAGAAAATTCCGTCCAAATCAACGAAAGATTTAGATAAAAATAGTTTAGTATCGATGCAAGAGCCTGTAGCACACGAAAACAATGACAAAATCCATGAAGAGGAGGACGACGACGATGACGGACCACCAATTTTGAGTCCGATGATGCCACTGTCGTCGGACAACGCGATTGAAGAGCCGGACGATGTTGCGAGCCATCGACTCAGTCCGATGCTCTCGTTAAACGATCCAGAAGAAATGAATCCTCGTCCAATTTCTCCTGAAATTAAAGAAACTGACAAAGAATCGAACGTAAACGCTCAATCGTGTTCACCGAACAACGAACGATTTTCCGATGATGAGGATTGCGGTGAACGTTCGAACGAGGAGTTGGCCTCGGACGAGGAACCCGAGGAAGAAACGCTCGAGGACGAGAACGAGGAGCTGGACGATGAGGACAGTAGAATTCACGTGGTGAATCCTGACGACGAATATCATTCTGACGATGATCGACCGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTCGACGAAGAGGAAGAGGGTGTTGAAATAATTGGGGAGGATAACGACGTCGACGAGGAAGAAGAGGAGATCGAAGACGAGGAACTAACAGCCGAGAATTCTTTGCAAATCCACAATTTGGACGGAACTGTATTGATGGTTGCGAACGATGCGGACGGTAATCAAATATTGATTCAACGAAATGTCTCGGACATGGAAAATGACGAGTCCATCGGAGCCCTGACCGGCTACATTTACGAGGACGATGAAGAGTACGACTTCGCCGGGTTTCAAGTCGAAGAGGCTGGAATCCACGTGGAAGAAGCGAGACCGAGTAACGGCGAGGATAGCGAAGAGGAAGAGGAGGAGGAAGTAGAAGAGGACGTTGTCCTGGAGCAGGATGAAGACGAGAGGGAGATCACGGAGGCTGAGGACGAAAAAGAGACGCGACATGATTCCGCGGACGAATCAAATCACGAAGAGATGGAAATGACGACGAGGAGCGAAAAAAACGACCAGGATGACGACAACGACAGAGTCGGACAAGATTCGAGTGCCACATAG
- Protein Sequence
- MEPSKERYNELCRLCASYDAVKMDIFGNEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPGSNATGKQMENGGENYSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEGDHEVEEIHNVSGAEEGVAKESVFATNASFDDADDRKSDEYEMDMETNPSDFLEMTPMVTEELDETSTKKTQASTKTRNMMETFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPVAYVQPDNRYRCKTCPKMYTNVTDLNKHTRVCAADVAAKDKQQQQRPIKKISRKNKSRVDTSDISSSSSTTDTEDESNNDYRNAEAKLSKNPQLTILKQALTKGGENLKRDYEDRRNQVSAGSGNNKPPAAKVARIENNEGPARKRWYCEMCPQNFTSVDKLKQHEMVHDAERPYVCILCEKDFVLKTSLSRHIVSSHGVDPTPILESDKCTKKGALAQSWRKKLIKTEEVRSGGGGRKREAPSDSSEDADSFAHGNMVEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNANYYNESFNSNEVNDHLMDFDPEDGDKVDCYICYKSFPNEDHLIRHQRNAHKSEGVVPSSQVTIPSSNGPAAVAVPGLNGTKAQYHLFFVCELCGSSHPSKWERWLHVSANHSEDPSMRCEREDCGKIFATKALRNEHAQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVAKLSSHVKTNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGVVEVDPALGNSVDAGGRAPAAGDIRNDPGAYYGEKSPKEVQLTCELCTDLSFENWQSLCHHRRVIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCMKTSASKDHLMAHIAKIHRYEPENKLEMMMVVGEAAAAVTGEEEDGEEEHEPRRRRRRRGDASSLGAIGEDDEAGVGAGVHHCDKCQKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSEYTCHLCNEAVTSKLGIMTHNRVNHLHHPDLTCENGNCRKLFRTKEDLESHRKDHKYHNTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHEGVLHKPNTCQVCGKRYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRHHYEHVHNVPKDQLAGFENRLLDSRTEDCDAIVKDEPEDYEYEVQRETNPAVALRDDNDAYDFKRRRGSSGNNHRHTHDCEICPEIFLNRETLSDHYRNVHNTDPERMFKRIKLERGEGGRFTSTSVPPKGSSKKMMMRERENFECQNCSRQFCTKSLFWNHTNVCTRRNSANREDPRSSSSFGQSSSILEAHLKNNNRIKREPSDIPGLDETNLNIPDFNLFEDINMQLSEQKPIPNLMPLSELRRAGGPGVLLPSSNEKSLRKDSRKDSRKVYDESTNTVCICEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTNYEQLGQHLRTTHESVLSREGNNFTCKTCGRYHNARSKLLLHMSIHINNDNGGGTCWCPKCERTFESEEKLNEHASICDKSRPIFEEHSADVDTDRETKIEDDKGSLIGDGASLTGEDEEEVDFSDRRVRSNSENTENSESSHGGARSNSESDSSEEEEEDTESRTNSRATGPATCHSDSEEENDSSEKSPNDIPSTDGLKDGKDSSENDSNVRKNETNKLATKLPETKQEDEDVEEKKNKDESIEPPKTQVDEETEKIPSKSTKDLDKNSLVSMQEPVAHENNDKIHEEEDDDDDGPPILSPMMPLSSDNAIEEPDDVASHRLSPMLSLNDPEEMNPRPISPEIKETDKESNVNAQSCSPNNERFSDDEDCGERSNEELASDEEPEEETLEDENEELDDEDSRIHVVNPDDEYHSDDDRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDEEEEGVEIIGEDNDVDEEEEEIEDEELTAENSLQIHNLDGTVLMVANDADGNQILIQRNVSDMENDESIGALTGYIYEDDEEYDFAGFQVEEAGIHVEEARPSNGEDSEEEEEEEVEEDVVLEQDEDEREITEAEDEKETRHDSADESNHEEMEMTTRSEKNDQDDDNDRVGQDSSAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00439674;
- 90% Identity
- iTF_00262832;
- 80% Identity
- -