Basic Information

Insect: Campoletis sonorensis
Gene Symbol: ZNF236
Assembly: GCA_013761285.1
Location: JACEOJ010000145.1:2176066-2182904[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00018 0.015 16.0 2.5 2 23 53 74 53 74 0.98

2 23 2e-08 1.7e-06 28.4 1.9 1 23 93 115 93 115 0.99

3 23 6.1e-05 0.005 17.4 0.9 1 20 121 140 121 143 0.94

4 23 1.1e-06 8.9e-05 22.9 0.5 1 23 149 172 149 172 0.97

5 23 0.0016 0.13 13.0 2.6 1 23 181 204 181 204 0.98

6 23 1.2e-06 9.6e-05 22.8 2.8 1 23 319 341 319 341 0.98

7 23 0.028 2.3 9.0 4.2 1 23 347 369 347 369 0.98

8 23 0.00047 0.039 14.6 6.4 1 23 375 397 375 397 0.98

9 23 2.7e-07 2.2e-05 24.8 2.8 1 23 401 423 401 423 0.98

10 23 0.0051 0.41 11.4 3.8 1 23 478 500 478 500 0.98

11 23 2.6e-05 0.0022 18.6 3.9 1 23 506 528 506 528 0.99

12 23 4.6e-05 0.0037 17.8 1.2 1 23 534 556 534 556 0.98

13 23 0.0001 0.0083 16.7 7.2 1 23 562 584 562 584 0.98

14 23 0.067 5.5 7.9 1.6 2 23 926 947 925 947 0.95

15 23 6.6e-05 0.0054 17.3 4.8 1 23 953 975 953 975 0.99

16 23 1.2 97 3.9 0.0 2 23 983 1004 982 1004 0.96

17 23 9.9e-08 8.1e-06 26.2 1.4 2 23 1058 1079 1057 1079 0.98

18 23 0.0029 0.24 12.1 4.1 1 23 1085 1107 1085 1107 0.99

19 23 0.0011 0.089 13.5 3.9 1 23 1113 1135 1113 1135 0.97

20 23 0.00028 0.023 15.3 2.2 1 23 1141 1163 1141 1163 0.98

21 23 0.00021 0.017 15.7 1.3 2 23 1388 1409 1387 1409 0.97

22 23 3.5e-06 0.00029 21.3 2.3 1 23 1415 1437 1415 1437 0.98

23 23 5.9e-07 4.9e-05 23.8 3.0 1 23 1443 1466 1443 1466 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00018	0.015	16.0	2.5	2	23	53	74	53	74	0.98
2	23	2e-08	1.7e-06	28.4	1.9	1	23	93	115	93	115	0.99
3	23	6.1e-05	0.005	17.4	0.9	1	20	121	140	121	143	0.94
4	23	1.1e-06	8.9e-05	22.9	0.5	1	23	149	172	149	172	0.97
5	23	0.0016	0.13	13.0	2.6	1	23	181	204	181	204	0.98
6	23	1.2e-06	9.6e-05	22.8	2.8	1	23	319	341	319	341	0.98
7	23	0.028	2.3	9.0	4.2	1	23	347	369	347	369	0.98
8	23	0.00047	0.039	14.6	6.4	1	23	375	397	375	397	0.98
9	23	2.7e-07	2.2e-05	24.8	2.8	1	23	401	423	401	423	0.98
10	23	0.0051	0.41	11.4	3.8	1	23	478	500	478	500	0.98
11	23	2.6e-05	0.0022	18.6	3.9	1	23	506	528	506	528	0.99
12	23	4.6e-05	0.0037	17.8	1.2	1	23	534	556	534	556	0.98
13	23	0.0001	0.0083	16.7	7.2	1	23	562	584	562	584	0.98
14	23	0.067	5.5	7.9	1.6	2	23	926	947	925	947	0.95
15	23	6.6e-05	0.0054	17.3	4.8	1	23	953	975	953	975	0.99
16	23	1.2	97	3.9	0.0	2	23	983	1004	982	1004	0.96
17	23	9.9e-08	8.1e-06	26.2	1.4	2	23	1058	1079	1057	1079	0.98
18	23	0.0029	0.24	12.1	4.1	1	23	1085	1107	1085	1107	0.99
19	23	0.0011	0.089	13.5	3.9	1	23	1113	1135	1113	1135	0.97
20	23	0.00028	0.023	15.3	2.2	1	23	1141	1163	1141	1163	0.98
21	23	0.00021	0.017	15.7	1.3	2	23	1388	1409	1387	1409	0.97
22	23	3.5e-06	0.00029	21.3	2.3	1	23	1415	1437	1415	1437	0.98
23	23	5.9e-07	4.9e-05	23.8	3.0	1	23	1443	1466	1443	1466	0.96

Sequence Information

Coding Sequence: ATGACTCTAGCCGTCGATTGCGTGAATTTTGCTATTCTACTCATTTGCTCTCAAGTATTTCACTTCGCTCTTGGTCTCAGCTCTCAATATTACAAGGCTCAACTGGATGCTCATTTGAAACTCCATAATGAAAAATGGTCGAGCGAAGATGTTCGAAAGTGTAAACTATGTCACAAGCAATTCACTCAACCTGCTTTGTATCGTCTTCATATCAGAGAACATTACAGAACAAAAATCGTTAAGAAGACGAAAAAAGGAATGAGTCACAAAACAATGTACAAGTGTAAGATATGTTCAAAGTCATTCAAAAAACCGAGTCAATTGATGAGGCACATCCGAGTGCATACGGGAGAGAAACCCTTCAAGTGCAATATATGCACTCGTGCATTTACACAAAAGGGTTCACTTCAGATCCACACGTGGAAACACATTGGGGTACGTCCGTATCGTTGTGAATACTGCAACGCAAAATTCACCCAAAAAGGTAACTTGAACGCTCACATATTGAGAGTTCACAGTGCTCAAGAGGGTGATCCTATTTATAGTTGTAGTCTGTGTACCTGCGTGTTCAAGAAATTGGGAAGTTTGAACGGCCACATGAAGAGAATGCACTCTAATCCTACAGAGGAACAAATGCAAAAATGCGACAGTTCAACGGAGGCAGATATGCAAGCGACTGTAGACAATGTGATGTCGCAACTCGCATCACTCGATGCAAATGTTAAAAACCAAGCGGATTCGACGAATCCGACGAATCCGACGAACCGTCAAAGCGATATTATTCAGCAGGCTCTGAAGAAAAGTGGCTTTGAAAGTAAGAAAAAAAGCCCCGAGGACGCGAGCAAAAAGGCTGAGCCTCAGACGTCGTTCGTCACATTGTTGGACAGAGCCCAAGATGGCTCCTTAAGAAGATATTTGACGATAAAACAACGATGCATTGGAAGCATAAGATGGTACTCTTGCAACTTTTGTCATAAGGAGTTCAAGAAACCATCGGATCTTATACGACACTTACGAGTTCATACTCAAGAAAAACCTTTCAAGTGTTCATCGTGCTGTCGTTCGTTCGCGTTGAAATCAACACTGAGAGCACACGAGCGAAGGCATGCGGGTACGAAGCAATATTCTTGTGGCACATGTGACAAAACGTTCACCTGTCACAGCAGTTTAACGTCTCACATGCGTTCTCACGTCAAGCCACACAAATGTGATCTCTGCGGGAAATCCTTCAGTACGAGTTCCGTATTGAAAAGTCATATGAACACTCACACGACGACCAAATCAAAAATATCACCGGAAGCGGAGAGTCTCGTCACTCAGATTGTTCTCGAAGAGCCACTTTTGATAAGCGATGCTGGTAATAAAATAAGCGTCGCTCACGTTAAGCCAAAGCAGAGACAAGTTTATGACAACAGCGACGAAGCCAGACCTCATAAATGTTGGGTCTGTCCATCTGCTTTTCGAAAAATCAGCCATCTCAAGCAACATTATCTAAGGCACACCGGAGAGAGGCCGTACAAGTGTCCAAAATGCGAAAGGAAATTCACATCAAACAGTGTATTGAAGTCCCATTTACACACTCACGACGAATCGAGACCATACAGTTGTTCAGTTTGTAGCGCAAAGTTTTCAACGCAAAGTAGTATGAAGAGGCATTTGGTAACACACAGCAATGTCAGGCCCTTCATGTGTCCTTACTGTCACAAGACTTTCAAAACATCGGTCAATTGTCGAAAACACATGAAGATTCACAAAACAGAGCTTGCCCAACAGCAACTGGCGCAGCAGAGAACTCAGCAAGAGCCTGAACTTTCGTCAATAAAAGAAAAACAATCGATAGAAGCATTGCCGGAAAACTTGACACTTCACGAGGACGTGGCAGTGACTTTTCAGACTCAAATTGCTCCAGACTTTACGCAAGCTTTCAACGACCATTTCCAACCGATATCATTGTCCAAGGAAAAATCGTATCTCGTCCATCACGAAATGAATCAGACAATGGAAAATCATAATTTAGCCGTCGTAGATACGGATAACTTAGGAACATCCCAGACCCTGCATGCCGATGAAACGGGCACTATTACGCTACCTAATTACTCCGGTGATCAAACTCTCACTGCAGAAAGCATACGAGAAATTGAGGAAACTTTAAATCAGCAATTATTCAATATCGGTCTGAACGATCCGAGTAACGTGACTTTGGGCTCGAGAGATCAGCAAAGCATAAATAATATTTATGACAACGCCAAAACATTAGATTCTGTCAATAATGTTAGCATTGCTTCAAATATATTTCCCACGCACTTTGATACCTTCGATATGAGTCAAATAACGCTCCAGACTGACACGGAAATCGACTTGGGCATAAGTTCAGCAAATTCGACGAGTATGGCGAGCATTTTGCCACGATCAGCGCAAGAGGAACAACGTCTTGTTCCAGTAACGACTTGCAGCAGTGGAGAAGAGTCACCAAATAAATTATCACGTCACTTGATGGTTGTGAGTTCGATGCAAACGTGTCCTGAACTCTCGAGGCCGGTGCAAGCTTGTCCAAAGTATCCAAAAGTTATCGCCAAAGCTGACACGACTGACGTTACTGACATTCTAAATGTTGATAATGAAACAAATGAACAGAAGACTAACGACATGCTCCAATCACCGGTCACAAGACTTAACAACGTTCAGGACCATTCTCATTCTCGTAATGAACAAATGGAGCAACTTGTTGAAACGAATGGAACAACTACAATTGTCCTAGAACCAGAATCTCTCTTGGAATGTCATTTGTGTGACAAGAAAGGTTTTACAATGGAAAAACTAAAGAGTCATCTAAATGCTCATCGTGGAAGTAAAGAGTTCCAGTGTAGCCAGTGTTCATTGAAATTTTGTACGAACAGTGGATTGAGCCAACACATGAGGAAACACACTTTAAAATCAATGAATTGGAAATGTTCAATCTGTATGGAAATTTTACCGAACGAGGGAGAGTTGAAGTTACATGCTCAGATGCACGAGGATATCGAGTGGACAGGAGTGTCGATAGAACCGGACAGTTCGCAAAAAGAGCCGGTAGCCATGGACCCAAATAAATATTTAACGGAGTCAGGTAGCGGAACGACGAACTGTGAGGAGAATGGTGGACTTGCAAAAGAGAAGAAGGAATACTCGAACAAGTGTAAATATTGTCCAAAAACATTTCGGAAACCAAGTGATTTGATAAGGCACGTGAGGACGCACACGGGCGAGCGTCCTTACAAATGTAAATTTTGTGAAAAGAGTTTCGCGGTCAAGTGCACCTTGGATTCTCATACAAAAGTGCATACGGGCAAAAAAACGTTTTGTTGTCACGTATGCAACAGTCTTTTTGCGACGAAGGGAAGTTTGAAAGTTCATATGCGTTTACACACGGGCTCGAAGCCCTTCCGATGCCCGATGTGCGATCTTCGTTTCCGCACTTCGGGACACCGGAAAGTGCACGAATTGACGCACACTCGGGACACGAAAACAGGCACGAAACGCAAATCAAAACAAATGAAAGTAAGCGCGATAGCCGAAGTAGTAGCTGAAGTGGAAAAAACCGTAGAAAAATCGGCGCATCTTCCAACAATCAACGAGCAAACAAATGAGACAGCTTATTCGAATCTCGATTCGATTACGATAGGAGCGAGCGGATTGACCAACCATATTACTTTCAATCCTGATGGAACAATTTTGAACAACGATTCCATGCTCTCAATCAATGAGAGCAATCAACTGGTAGCTAACTTGCATTTTCTTCTGGCAAATGGCCTCGTCACGATACAAGCTGACGACGTCTTGCTGCCTCCAACAACTTTAAACGCGGACGTCAATATTCCTCCGAACGATACGAGCCCTGTAAATATTCTTTCGCCAACAACGGTCCTTCCCCCGGAGCAACAAAGACAACAACAGTTAACTTATAACAATAATCCTACAGAAAATATCGTCGTAGCTACGCACCTTCCAACTTATGCCACTAACGACTTTGATCAGCAAACTAAATCGATCAATTTGAACGGCTGCGGTAATGTAGTGTCCACGGAACTTCAAAACAATCCCTTAGAAAATAAATTACATTCACAACAACAACAGCAAACCTGCAAACAAGTTGGCTCTGGGAAAACCAACAATTCGAAGAAAGAATGCGACATTTGTGGCAAAGTATTCATGAAACCGTGCCAGGTCGAGAGACACAAACGTATTCACACCGGTGAACGACCTTACAAATGCGAATTGTGCGACAAATGTTTCGCGCAAAAAGCTACTTTACAAATGCATCAAAAAGCTCACACCGGTGATCGACCTCATCCATGTCCTCATTGCGATTATTCCTTTACTCAAAAGGGTAATCTGCAAACACATCTCAAAAGAGCCCATCAGCTTGACACCCTCGAAGTCAAAAAAATACGTAGAGGACCGCAACAATTGTTGAGCGCTAAATTAATTCAGAACAATTTGGATGATAATAGAATATTGAATTTCGACGACATCTCGATCGTCGAGTACCTCAAGTGA
Protein Sequence: MTLAVDCVNFAILLICSQVFHFALGLSSQYYKAQLDAHLKLHNEKWSSEDVRKCKLCHKQFTQPALYRLHIREHYRTKIVKKTKKGMSHKTMYKCKICSKSFKKPSQLMRHIRVHTGEKPFKCNICTRAFTQKGSLQIHTWKHIGVRPYRCEYCNAKFTQKGNLNAHILRVHSAQEGDPIYSCSLCTCVFKKLGSLNGHMKRMHSNPTEEQMQKCDSSTEADMQATVDNVMSQLASLDANVKNQADSTNPTNPTNRQSDIIQQALKKSGFESKKKSPEDASKKAEPQTSFVTLLDRAQDGSLRRYLTIKQRCIGSIRWYSCNFCHKEFKKPSDLIRHLRVHTQEKPFKCSSCCRSFALKSTLRAHERRHAGTKQYSCGTCDKTFTCHSSLTSHMRSHVKPHKCDLCGKSFSTSSVLKSHMNTHTTTKSKISPEAESLVTQIVLEEPLLISDAGNKISVAHVKPKQRQVYDNSDEARPHKCWVCPSAFRKISHLKQHYLRHTGERPYKCPKCERKFTSNSVLKSHLHTHDESRPYSCSVCSAKFSTQSSMKRHLVTHSNVRPFMCPYCHKTFKTSVNCRKHMKIHKTELAQQQLAQQRTQQEPELSSIKEKQSIEALPENLTLHEDVAVTFQTQIAPDFTQAFNDHFQPISLSKEKSYLVHHEMNQTMENHNLAVVDTDNLGTSQTLHADETGTITLPNYSGDQTLTAESIREIEETLNQQLFNIGLNDPSNVTLGSRDQQSINNIYDNAKTLDSVNNVSIASNIFPTHFDTFDMSQITLQTDTEIDLGISSANSTSMASILPRSAQEEQRLVPVTTCSSGEESPNKLSRHLMVVSSMQTCPELSRPVQACPKYPKVIAKADTTDVTDILNVDNETNEQKTNDMLQSPVTRLNNVQDHSHSRNEQMEQLVETNGTTTIVLEPESLLECHLCDKKGFTMEKLKSHLNAHRGSKEFQCSQCSLKFCTNSGLSQHMRKHTLKSMNWKCSICMEILPNEGELKLHAQMHEDIEWTGVSIEPDSSQKEPVAMDPNKYLTESGSGTTNCEENGGLAKEKKEYSNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCKFCEKSFAVKCTLDSHTKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFRCPMCDLRFRTSGHRKVHELTHTRDTKTGTKRKSKQMKVSAIAEVVAEVEKTVEKSAHLPTINEQTNETAYSNLDSITIGASGLTNHITFNPDGTILNNDSMLSINESNQLVANLHFLLANGLVTIQADDVLLPPTTLNADVNIPPNDTSPVNILSPTTVLPPEQQRQQQLTYNNNPTENIVVATHLPTYATNDFDQQTKSINLNGCGNVVSTELQNNPLENKLHSQQQQQTCKQVGSGKTNNSKKECDICGKVFMKPCQVERHKRIHTGERPYKCELCDKCFAQKATLQMHQKAHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLEVKKIRRGPQQLLSAKLIQNNLDDNRILNFDDISIVEYLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00439660;
90% Identity: iTF_00829697;
80% Identity: -