Basic Information

Insect: Campoletis sonorensis
Gene Symbol: Hr39_2
Assembly: GCA_013761285.1
Location: JACEOJ010000190.1:59577-65779[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.45 1.8e+03 -1.8 6.8 50 163 215 327 160 375 0.66

2 3 9.3e-08 0.00038 20.2 0.0 1 21 547 567 547 572 0.92

3 3 4.5e-71 1.8e-67 228.7 0.0 163 408 687 929 578 929 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.45	1.8e+03	-1.8	6.8	50	163	215	327	160	375	0.66
2	3	9.3e-08	0.00038	20.2	0.0	1	21	547	567	547	572	0.92
3	3	4.5e-71	1.8e-67	228.7	0.0	163	408	687	929	578	929	0.75

Sequence Information

Coding Sequence: ATGTCGGAACAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCACCCTCGCAGTCTTGGAAATCAACAAGCAACGCGTCATCGTCGTCATCGTCATCGATTCAATCTTCGCGGACACTCGAGGCTGGAAAAAATGTTTCTGTCACGACGATCAATGTACCACCGGCCCAGGAAATGCACGACGGTAAAAGCGTATGCAAATATCTGGCAGGGCAAAATGGCGTGACGGTATCGGTGGTCTCGAATTGCGGAAGTGGTCCAGGCAGCGGTATGGGTACCGGACCTGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGCGCATCCTCCTCGTGTGCAGAATCAAATTGCCTCGAGGATCTTGAGGACAGCGACGGTGAAGTTAGTAAAATCGATTTTCGAGGCGTTAATCTACGAACGAAGAAGAAACGAGATGCCTCCGGTGGATCGGAGAACGAATGCGGTGCCGTAGGCGCCGACAATCTCGAGCAACAACAGCCTGAGAGACCAATGTCATGGGAAGGCGAATTATCCGATCAAGAAATGTCTTCCCATACCATAACTAATCAGGATCACGAAGAAACGTCGATGGAAGGAGTCCAAGTATGTGGAGCAAGTCCAGGGCCACAGGAACAAAAATTTCCAATAAAGCCAGAGCCTGATTTTCGTTCGAGTCCGAATTTGTTGATAGGCTCGCACAACGACGGAAGTATAGGATTGTCGCATGTTCAGCAACTGCAGCAGCAGCAACAACAGCGAGGTATAGATGGTTTGGAATCGGCGCAACAGAGCGATCTTCCGTTGTTGGTTGGAAAGCTTTTGGGTGGTTACAGCAGTTCGACACCGAATCACAGTCCGATATTGAATCCACGTCATCATTTAACGAAGCACAGTCATACGAGGTCACAGGTGCCTTCACCAGATTCGGCGATTCATTCAGCGTACAGCGTGTTCAGTTCACCGACGCAGAGTCCACACGCGGCTCGTCATTCGGCCCTTGGTGCTGGGAGTCCGGTGCCATCGTCTTCACTGTCGCGTCATAGTTTCAACAATTCAACGTCTTCGTTATCGCTCTCGTTGTCGCATTCATTGTCCCGCAACAATTCGGACGCTTCGAGCAGTTGTTACAGTTATGGTTCGCTGAGTCCGCCCACGCATTCGCCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTAGCTTCATCGACAGCCACGAATCCACACAGTTATGGACATCAAAGCTCGGAAATATCTTCGGAAAGTGGTCATCCGGAGGATCAAGAAGATTGTAAAATTCCTACTGCCACTTCGGGTATCTCGACGAGGCAGCAATTGATCAACAGTCCATGTCCGATTTGTGGTGATAAAATAAGTGGCTTTCATTACGGTATTTTTTCGTGCGAATCTTGCAAAGGTTTCTTCAAACGGACCGTGCAAAATCGCAAAAATTATGTTTGTCTTCGAGGCGCTGGCTGCCCGGTTACTGTTGCAACCAGAAAAAAATGTCCTGCTTGTCGTTTTGACAAATGTCTCAACATGGGCATGAAATTGGAAGCCATCAGAGAAGATCGAACGCGTGGAGGTAGAAGCACTTATCAATGCACTTATACACTTCCGGCTAATTTGATTGGAAGCTCCGGTGGCGGCATGTCCAATGACAAAATGACCGGTGGCAATTGCAGTCCAGCTCCACCTGGCTCCGAACATCATCATTCGGCGAGACATCATTGGAACCATTCTCACAAAATCCAAGTTGTGCCACAATTGCTGCAGGATATCATGGACGTTGAACATTTGTGGCACTACAACGACAACGATCGCGTCACTGGTGGCAGTCAAAGTTCTAACGTTCCCGGTGGTGGCAATGGCTCGCCCATGCCCAATGACATGCCTGGACTTGGCGTTAGTGGACTCGTTTCCGGTGCTGGCACCGGGAGTCTCAACACCTCGAGCAACAATGGCAACGTTGACAGTCGTTGCGATACAAATAGATCCAACAATTCACCCTCCAGTCTCAACAATGAACAACATCAACAAAATTCAACTTCCAATAATCCAACCAACGGCAGCAACGATCCAACCACCAATCCCAATGGCAATACCACACAAAATCCTGACTTTCTATCGAATCTCTGCAACATCGCCGATCATCGACTATACAAAATTGTTAAATGGTGCAAAAGTTTGCCTCTCTTTAAAAATATTTCTATAGACGATCAGATTTGCCTGTTGATCAATTCGTGGTGCGAATTGCTCTTGTTCTCATGCTGCTTTCGCAGCATGAGCACTCCTGGCGAAATTAGAGTCTCACTTGGCAAATCAATTACTCTCGAACAAGCTAGACAATTGGGACTTGCTACGTGTATCGAAAGAATGCTCGCTTTTACCAATAATCTGAGGAGGCTCAGGGTAGATCAGTACGAATACGTGGCGATGAAGGTTATTGTTCTACTGACATCGGACACGAGCGAGCTTAAGGAACCCGAAAAAGTGAGAGCTTCTCAGGAAAAAGCTTTGCAAGCTCTCCAGCAATATACAATTGCAAGGTATCCAGAAATGCCTGCGAAATTCGGTGAGCTATTGCTCCGAATACCGGATCTTCAAAGGACTTGTCAAGCCGGCAAAGAATTGCTGAGTGCCAAAAGGGCCGAAGGAGAAGGCAGTTCGTTTAATTTGTTGATGGAATTGCTTAGAGGAGATCACTGA
Protein Sequence: MSEQNGPTEGPGWWPPSQSWKSTSNASSSSSSSIQSSRTLEAGKNVSVTTINVPPAQEMHDGKSVCKYLAGQNGVTVSVVSNCGSGPGSGMGTGPGGGGGGGGGGGASSSCAESNCLEDLEDSDGEVSKIDFRGVNLRTKKKRDASGGSENECGAVGADNLEQQQPERPMSWEGELSDQEMSSHTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPNLLIGSHNDGSIGLSHVQQLQQQQQQRGIDGLESAQQSDLPLLVGKLLGGYSSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASSTATNPHSYGHQSSEISSESGHPEDQEDCKIPTATSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSSGGGMSNDKMTGGNCSPAPPGSEHHHSARHHWNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVTGGSQSSNVPGGGNGSPMPNDMPGLGVSGLVSGAGTGSLNTSSNNGNVDSRCDTNRSNNSPSSLNNEQHQQNSTSNNPTNGSNDPTTNPNGNTTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_00263524;
80% Identity: iTF_00263524;