Crap007093.1
Basic Information
- Insect
- Campoletis raptor
- Gene Symbol
- retn
- Assembly
- GCA_948107755.1
- Location
- OX403626.1:17247632-17256768[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-20 2e-16 60.1 0.0 16 89 17 88 3 88 0.91
Sequence Information
- Coding Sequence
- ATGCAGCTCGAATTGATGAAAACTCGCTCACAAGTAGTAAAAGTCCGTATTGGAACTCCCATCAATCGTCTACCAATTATGGCTAAATCGGTACTCGACCTCTACGAACTATTTCAATTGGTCATAGCCCGAGGTGGTCTAGTCGATGTTATAAACAAGAAACTCTGGCAGGAAATCATCAAAGGCTTACACCTGCCTTCTAGCATCACATCCGCTGCATTCACACTTCGAACCCAATACATGAAATATTTGTATCCATATGAGGGTGAAAAATTGTCACTTTCAACCCCGTCGGAACTACAAGCTGCTATTGATGGAAATCGACGCGAAGGACGAAGAAGCAGCTACGGTACTTACGGGGGTGCAGGTGGTGACAGTATGATGCAAAGAAATCCACACACTCCTGTCTCGATGGCTATGCAAATGTCACCCTTGTCACTAGTCTCTGCGGTGGCCGGTGGTCAACATCACGGTTCCCAATCATTAATTAATGGCAGCGCTGCTCATACACCAATGCCACATCATCCTCATCATCCGCAACACCCTTCAGGCCCGATCGGCCCCATACCGGGCTTAGCACCCGCTGAATTCGAGGCTCGCATGGTCGAGTACGTGAAATTATTGAACAAAGAGCTCAGAAATGCCGGTGGAGCTACACCACCACCGATGATCCATCGACAGAGCAGCGCATCTCCACCTCCCAGCACACCGCCACGTGACAACGCGTTCAGTGCTCTTGAAATGTCACGATTAACACTCTGGAACATGTACAACAACAATACGCTCTATCCTGGGGTTGGACATCAACCGCCTTTATCTCCACAAGCATCAAACTCACCACATCGACAAGCAGCAAGTCCTGAACCTCAGAGAGAAGCCCTCGATCTTGGACTCAGATCTTCACCACTGTCCTCGTCATCTATGAGAAACAGCCCACAGTCGTCAAGCAGTAGCATTCAGCCCAAGAGGGATCCAGAGCTCGCTCATACACCTGGTGGTCCACCACCTGCCAAGAGGCTACTTTCGGACGAAGATAGTCCCAATGAAAAAAACGTTCCAGCATTGGCAGGCACTCATATCAAAATCTCCAATCGCGGTGACGGACGAAACGGCGATAATTCCCTGGTCGTCAGTATGGAACTGAACGGAGTAATGTACCAGGGTGTTTTGTTCGCACAGACAGACGGCAGGAGTACGACGACCGCTACTAATAATAACACAAAAGCGGCGAGAAGTATCGTCTCGTGA
- Protein Sequence
- MQLELMKTRSQVVKVRIGTPINRLPIMAKSVLDLYELFQLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYEGEKLSLSTPSELQAAIDGNRREGRRSSYGTYGGAGGDSMMQRNPHTPVSMAMQMSPLSLVSAVAGGQHHGSQSLINGSAAHTPMPHHPHHPQHPSGPIGPIPGLAPAEFEARMVEYVKLLNKELRNAGGATPPPMIHRQSSASPPPSTPPRDNAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQASNSPHRQAASPEPQREALDLGLRSSPLSSSSMRNSPQSSSSSIQPKRDPELAHTPGGPPPAKRLLSDEDSPNEKNVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDGRSTTTATNNNTKAARSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129126;
- 90% Identity
- iTF_01056577;
- 80% Identity
- -