Cspl015776.1
Basic Information
- Insect
- Calopteryx splendens
- Gene Symbol
- bab1
- Assembly
- GCA_002093875.1
- Location
- LYUA01000137.1:262234-268435[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-14 2.8e-10 42.4 0.0 5 43 1 40 1 42 0.95 2 2 0.77 1.2e+04 -1.2 1.3 6 15 146 155 144 159 0.87
Sequence Information
- Coding Sequence
- ATGGCCGAAGCCATTTTCTCCGTATTGAAGGAGGGTCTGTCTCTATCCCAGTCAGCCCGAAAGTATGATATCCCATATCCAACATTTGTGCTGTATGCCAATCGCGTGCACAATATGCTTGGCCCATCAATTGATGGAGGATCTGCTACACAGCTTCATCAAGGCTATCCTTTCTTTGCAGATCTTCGCCCTAAGGGAAGAGGGCGACCTCAGCGCATTCTCCTTGGAAATTGGCCTGATGACCATATTCGTGGTGTCATCAGAGCAGTGGTATTTAGAGACACAACTCACGTAAAGGACGAACCAGCACATCTTTCTTATCCTCCTCGTATTCAGgaacctattcctcctccttctccacAGAAttacccacctcctcctccaaatGTACCTTCTTCCAACGGACCAGAGCCAGGCACACTGTCAGTGGCAGCTGCAGCGGCCGTCGCAGCAGTCGCCCAGGGCCTAAGGCAGCAGCTGTGCGCATCTGCAATGGGCCCCCaggccctcccccctccgcctccacctCCGGTTGCCCCACAAGCTTCCCCGCCAccacaacagcagcagcaaccaGATCCCACTGCGGGCATGGCAGCATTGGCCAATAGCCTAGGAAGTCTAGGCAGTGGCCTTGGAGGTCTCGTCGGGAATAGCATTGGAGGCATTGGAGCAATAGGAGTGAGTGGGATGACGTACAAACCCGGAGCAACATACGCCACGCCGCGTCCAGAGAATCTCTTCCAGGAGGATATTGATGAGATAGTTAAGAGCCCCCTGCAGCAGCATGGTAGTGGAGGCAGTGGGGTGGGTGTCGATGATAGGGTCATGTCTAGGGAACCTCCCCCCGAGTTACAGCCAGTTCAGGTGAAGATGGAGCAGCTGGCTGCCGAGGGCCATAATGAGTGA
- Protein Sequence
- MAEAIFSVLKEGLSLSQSARKYDIPYPTFVLYANRVHNMLGPSIDGGSATQLHQGYPFFADLRPKGRGRPQRILLGNWPDDHIRGVIRAVVFRDTTHVKDEPAHLSYPPRIQEPIPPPSPQNYPPPPPNVPSSNGPEPGTLSVAAAAAVAAVAQGLRQQLCASAMGPQALPPPPPPPVAPQASPPPQQQQQPDPTAGMAALANSLGSLGSGLGGLVGNSIGGIGAIGVSGMTYKPGATYATPRPENLFQEDIDEIVKSPLQQHGSGGSGVGVDDRVMSREPPPELQPVQVKMEQLAAEGHNE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01402075;
- 90% Identity
- iTF_00306853; iTF_00797171; iTF_01286299; iTF_01384549; iTF_01402075; iTF_01131480;
- 80% Identity
- -