Cspl014420.1
Basic Information
- Insect
- Calopteryx splendens
- Gene Symbol
- -
- Assembly
- GCA_002093875.1
- Location
- LYUA01000122.1:367057-368109[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-17 5.6e-13 51.0 0.0 1 42 142 184 142 187 0.95
Sequence Information
- Coding Sequence
- ATGGTCAGATTTCAATGGACTTTGGAGCACGTAGTGTGTCCCAGAATATCACTGTCTGGAGCTTCCTCCCACGCCTTCTCAGCTCACCACCACCACTTACCTCCGGCATTTGACTCCAACCCATCGGCTTCCATCTCTTCCACCATGTCCTCTGCCTCTTCTTCCAATCCAGTCTCATCTCACATCTCTACATATCCCACCCCTGCATTCCCTCGGATCAAGTCGGGAGGGGTAGGAAATAATGGTAGTGGTGGGGCAAGGGGACTGGGCGGCGGCTCGTCTTTCACACACCCTTATGCTCCTCATTACTACCATCACTCTCACCCCTCAAACAATCCCATGGGAATATCTTCCCAAGTCTCGGTCACCCCCAATCAAACTATCGCTGGAACCACCTGCCGTCGTAAGAGAACTAACACTCAGACTGATGAAAATTTCCTCAGTGCGTTGGAGGCAGTGAGAGCTGGAGGTGTAGGCTTTTGCAAGGCCGCTCGAATGTATGGTGTGAACAACAGAACACTGTGGTTGGAGTACAAGAAGAGAGGTTATCCCATAACACGCCCGAGTGTCAAGGCTAGGGTCTCTGAGTTTGCACTCCCAAATCCACCGccaccgcctcctccaccccctcccccgcccacttcACCTCTTCACGGCCCAGACAGATCACGACCCGTTTCAGCCCACCCTAGCTGCTCACCAGCAGTCATGTGTTCTGGTGAAGGGACCggtgggggcggtggggggtCTGGTGATGcgagtggaggaggtggtggaggtaaTGGTGGCGGTAATGGTAACGGTGGTGGTGGCGGTAATAGTGGTGGGAACGCAGGGGTGGAGTCCAGAGGGAGAGATGAACAAGGGCCAATGGGCTACATTAATCCAGTGGTATCGGCCCCTCATCACTTAAGCCCCAGGGGATTTGAACAAAGGACTAATTTGGATTCAATGGAAGCTAGAAGGTTTCAAACTGGTGGCAGTGTTGAGTCCATGTTTATAGGGTAG
- Protein Sequence
- MVRFQWTLEHVVCPRISLSGASSHAFSAHHHHLPPAFDSNPSASISSTMSSASSSNPVSSHISTYPTPAFPRIKSGGVGNNGSGGARGLGGGSSFTHPYAPHYYHHSHPSNNPMGISSQVSVTPNQTIAGTTCRRKRTNTQTDENFLSALEAVRAGGVGFCKAARMYGVNNRTLWLEYKKRGYPITRPSVKARVSEFALPNPPPPPPPPPPPPTSPLHGPDRSRPVSAHPSCSPAVMCSGEGTGGGGGGSGDASGGGGGGNGGGNGNGGGGGNSGGNAGVESRGRDEQGPMGYINPVVSAPHHLSPRGFEQRTNLDSMEARRFQTGGSVESMFIG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01131478;
- 90% Identity
- iTF_00797170; iTF_01286296; iTF_00306850; iTF_01212602;
- 80% Identity
- -