Cmac000032.1
Basic Information
- Insect
- Callosobruchus maculatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_900659725.1
- Location
- CAACVG010000055.1:84347-98362[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1 1.9e+04 -7.7 5.6 15 19 170 174 169 174 0.81 2 20 0.14 2.6e+03 -1.4 0.3 4 10 205 211 204 211 0.92 3 20 1.3e-08 0.00025 21.1 17.0 1 19 219 236 219 236 0.99 4 20 1e-07 0.002 18.2 15.9 1 19 272 290 265 290 0.91 5 20 0.5 9.6e+03 -3.1 1.2 6 10 315 319 314 319 0.89 6 20 3.3e-09 6.4e-05 23.0 18.3 1 19 325 343 325 343 0.99 7 20 0.37 7.1e+03 -2.7 0.9 6 10 368 372 367 372 0.86 8 20 4e-07 0.0077 16.3 10.1 1 18 378 395 378 396 0.96 9 20 0.46 8.9e+03 -3.0 0.2 1 4 405 408 405 409 0.87 10 20 4.5e-05 0.86 9.8 17.0 1 18 430 447 430 448 0.94 11 20 2.6e-11 5e-07 29.7 13.0 1 19 457 475 457 475 0.98 12 20 0.27 5.3e+03 -2.3 1.0 5 10 503 508 503 508 0.90 13 20 0.00049 9.5 6.5 7.8 10 19 524 533 521 533 0.90 14 20 0.014 2.7e+02 1.8 8.7 1 12 543 553 536 553 0.86 15 20 0.56 1.1e+04 -3.3 2.7 14 18 581 585 581 586 0.90 16 20 0.086 1.7e+03 -0.7 0.5 6 10 612 616 611 617 0.85 17 20 0.00017 3.3 7.9 5.2 1 12 622 633 622 633 0.94 18 20 1 1.9e+04 -6.6 3.7 6 10 650 654 647 654 0.62 19 20 4.3e-05 0.83 9.9 17.2 3 19 663 679 662 679 0.94 20 20 9.5e-07 0.018 15.1 12.6 1 18 722 741 722 742 0.86
Sequence Information
- Coding Sequence
- ATGAAAATGCACTCCCAACCGAAGCAGAAAAACCCTTGGAATAGACATAATTCCAGAGGTAATTCAACTCAAAATCAGCGAAAAGGTGGTACCTCAAACAATGACCCAACTCCgtctgaagataaatttaaaagaGCCCAATCAAAACTGCAAGCAGCTGTTCAAAAACATGTCGAAGAATATGAATCATCTTcagaagaggaggaagaagttCAGTCAAGTAATTTAATAGAAAACATTCTAAAAAACTATACAAGTTCTTATGGAGAGCAAGACAATATAGGAAgaactcaaaattttattgagcAGGCTTTCACAGCTGGAGCTTCTACCTGTTTAATTTGCATTTCAAGAGTGAAAAGGGATGATCAGATATGGAGCTGCACAAACTGTTTTGCTCCTTTCCACTTGCTATGCATCCAACGTTGGTCCAAAGACACACTCACCCAGCAAAAGCAGGCACTTGAGGAACAAACAGCACCAAAAGGAAAACAGCTAGCTTGGTGTTGTCCAAAATGTAGACAAGAGTATGAAGTGGATCAAGTACCAAAGAAATATTTATGCTTCTGTGGAAAAAAGGAGAATCCAAAGTATGATCCATATTTGGTACCTCATTCTTGTGGGGAGATGTGTAAGAAAAATTTGATTCCTAACTGTGGGCACAAGTGTCTCCTTCTTTGTCATCCAGGTCCTTGTCCACCTTGTCCGGCAACAGTATCAGTAACTTGCTATTGTAAGAGTCAGGCACCTCAAACGCGTCGCTGCAGTAACAGGGAATGGTCTTGTGGAAACAAGTGTGGAAAATTACTATCCTGCAATAAACATTCCTGTTCAGAACCATGTCATCCAGGTGAATGTAAGCCTTGTCCTAAAAAGAGTATCCAAAAATGCATCTGTAAATCCGAACAAAAGCTGAGGGATTGTGCTGAACCTACTTGGCAATGCAACAAGGTTTGCAACAAATCATTCAGTTGTGGGCATCACAAATGTGAGAAGGTTTGTCATGATGGACCATGTGGTGATTGCCCTTTGACTGATCTAAGAACTTGTCCCTGTGGAAAGCAGGTATTCCAGCTACCTTGCACTCAAGAAACCCCCAGCTGTCAAGATACATGTGAAAAAGTTTTAGAGTGTGGTATACACACCTGCAATGAGAGATGTCACAAGGACAAGTGCGGACTGTGTCTGGAAACTGTTGTTAAGTCCTGCCGCTGTGGTCTACATTCCAAAGAAGTTCAATGTTATAAACCATACTTTTGTGAAACAAAATGCAAGAGAATGAGAGACTGTAACAAACATCCTTGTAACAGAAAGTGTTGTGATGGAAGTTGTCCTCCCTGTGAAAAACCGTGTGGCCGTACTCTGAGCTGTGGTAATCACAAATGTAACTCAGTTTGCCATCGAGGTCCATGTTATCCCTGCTCTCAAACTGATGTGGTGACCTGCAGATGTGGGTCTACGAAAATTCAAGTACCTTGTGGTAGAAAGCATAAGACTAAACCACCAAGGTGTAACAAGCCATGCACGATACCCCCAGACTGTCACCACTCCAAGAGGGGGCCTCATCGTTGTCACTTTGGGGAATGTCCCCCTTGTAAGCAAGTATGTGGTAAATTACATCCAGAATGCTCTCACAGCTGTCCTGCACCTTGTCACTCTGCAGTGTTGATGAAAGAAGAAACCCAGAAGGCTTCAATGCCTTGGGAACAAACTAAACCTCAGTTGAAGAGAGTAGCGTTGCCTTGTCCAGAATGTGTTGTGCCTGTTCCTGTCACTTGTCTAGGTCAACATGAAACCGTCGACTGGCCTTGTCATCTAGCCAAACCTTCCAGCTGTCAAAGACCGTGTGGCAGAATTTTGAGCTGTACGAATCATACTTGTGCCTTGCCTTGCCACACAGTAACAGGGGTCACTGATACAATGAAGGCAGGGGAGAACTGTGAGCAATGCGATAATCCCTGCTTGAAAGATAGACCAGAAGGCTGCCAGCATGAGTGTCCCGATCCATGTCATCCAGGAGTTTGTAAGCCCTGCAAGCAGATGGTACGAATAAAATGTCATTGCGGGCTAAACCAGTTGTATGTCACTTGTGCTGACTGGATGGACCCTACCAAGAGAGATCAGTTGCAGTGTTGTGGAAATCAGTGTCCAAAAAATTATGAATGTGGCCACAGATGCAAGGCAGACTGCCATTCTGGACCTTGTCCCAATGCAGAGCAATGTAAAAAAAGGTTAAGATTACTTGCAAGTGTAAGAGAATAA
- Protein Sequence
- MKMHSQPKQKNPWNRHNSRGNSTQNQRKGGTSNNDPTPSEDKFKRAQSKLQAAVQKHVEEYESSSEEEEEVQSSNLIENILKNYTSSYGEQDNIGRTQNFIEQAFTAGASTCLICISRVKRDDQIWSCTNCFAPFHLLCIQRWSKDTLTQQKQALEEQTAPKGKQLAWCCPKCRQEYEVDQVPKKYLCFCGKKENPKYDPYLVPHSCGEMCKKNLIPNCGHKCLLLCHPGPCPPCPATVSVTCYCKSQAPQTRRCSNREWSCGNKCGKLLSCNKHSCSEPCHPGECKPCPKKSIQKCICKSEQKLRDCAEPTWQCNKVCNKSFSCGHHKCEKVCHDGPCGDCPLTDLRTCPCGKQVFQLPCTQETPSCQDTCEKVLECGIHTCNERCHKDKCGLCLETVVKSCRCGLHSKEVQCYKPYFCETKCKRMRDCNKHPCNRKCCDGSCPPCEKPCGRTLSCGNHKCNSVCHRGPCYPCSQTDVVTCRCGSTKIQVPCGRKHKTKPPRCNKPCTIPPDCHHSKRGPHRCHFGECPPCKQVCGKLHPECSHSCPAPCHSAVLMKEETQKASMPWEQTKPQLKRVALPCPECVVPVPVTCLGQHETVDWPCHLAKPSSCQRPCGRILSCTNHTCALPCHTVTGVTDTMKAGENCEQCDNPCLKDRPEGCQHECPDPCHPGVCKPCKQMVRIKCHCGLNQLYVTCADWMDPTKRDQLQCCGNQCPKNYECGHRCKADCHSGPCPNAEQCKKRLRLLASVRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00249402;
- 90% Identity
- -
- 80% Identity
- -