Bsil006516.1
Basic Information
- Insect
- Bruchidius siliquastri
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_949316355.1
- Location
- OX438531.1:40117249-40123729[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1 2e+04 -7.8 5.6 15 19 168 172 167 172 0.81 2 20 0.19 3.9e+03 -1.8 0.4 4 10 203 209 203 209 0.93 3 20 1.5e-08 0.00031 20.9 17.0 1 19 217 234 217 234 0.99 4 20 1.6e-07 0.0033 17.6 16.4 1 19 270 288 264 288 0.91 5 20 0.68 1.4e+04 -3.6 1.0 6 10 313 317 312 317 0.88 6 20 8.2e-09 0.00016 21.7 16.0 1 19 323 341 323 341 0.99 7 20 0.42 8.5e+03 -2.9 0.9 6 10 366 370 365 370 0.86 8 20 6.5e-07 0.013 15.7 10.0 1 18 376 393 376 394 0.96 9 20 1 2e+04 -4.6 1.3 1 4 403 406 403 409 0.84 10 20 2.8e-05 0.56 10.4 17.1 1 18 428 445 428 446 0.94 11 20 4.1e-11 8.3e-07 29.1 13.0 1 19 455 473 455 473 0.98 12 20 0.22 4.4e+03 -2.0 1.1 5 10 501 506 501 506 0.90 13 20 2.4e-05 0.48 10.7 7.5 10 19 522 531 519 531 0.89 14 20 0.13 2.5e+03 -1.2 9.6 4 12 543 551 541 551 0.88 15 20 0.65 1.3e+04 -3.5 3.4 14 19 579 584 579 584 0.87 16 20 0.098 2e+03 -0.9 0.5 6 10 610 614 609 615 0.85 17 20 0.00034 6.9 7.0 6.3 1 12 620 631 620 631 0.94 18 20 1 2e+04 -6.0 4.3 6 10 648 652 645 652 0.81 19 20 3.2e-05 0.65 10.2 17.1 3 19 661 677 660 677 0.94 20 20 1.1e-06 0.022 14.9 12.6 1 18 720 739 720 740 0.86
Sequence Information
- Coding Sequence
- ATGCACTCCCAACAAAAGCACAAAAACCCTTGGAATAGAAATAATTCCAGAGGTAATAAAACTCCAAACCAGCGAAGGACTGGTAACTTCAACAATGACCCAACACCATCCGAGGATAGGTTCAAAAAAGCTCAATCAAAACTGCAAGCAGCTGTTCAAAAACATATTGAGGAgtttgaatcatcttcagaggaagaggaagaagtCCTGTCAATAAATCTAATAGaaaccatactgaaaaattataaaagttcTACTGGGGAAAATGAGAATCTGGGAAgaactcaaaatttcatagagcAGGCATTCACAGCTGGAGCTTCGACATGTTTAATCTGCATTTCAAGAGTGAAAAGAGATAATCAGATTTGGAGCTGCACAAACTGTTTTGCTCCTTTCCATTTGCTGTGCATTCAACGATGGTCCAAAGATACCCTCACCCAGCAGAAACAGGCACTTGAAGAACAAACTGCTCCAAAAGGAAAGCAACTAGCATGGTGTTGCCCAAAATGCAGACAAGAGTATGAAGTGGATCAAGTACCAAAGAAATATTTATGCTTCTGTGGGAAAAAAGAAAACCCAAAATATGATCCATATTTGGTACCTCACTCATGTGGTGAGATGTGTAAGAAAAATTTGATTCCCAACTGTGGACATAAGTGTCTCCTTCTTTGTCATCCAGGCCCTTGTCCACCATGTCCTGCCACAGTATCAGTTACTTGCTACTGTAAGAGTCAACCACCTCAAATTCGCCGTTGTAGCAACAGAGAATGGTCTTGTGGAAATAAGTGTGGAAAATTGCTATCCTGCAATAAACATTCCTGTTCAGAACCATGTCATCCGGGAGAATGTAAACCGTGTCCTAAGAAAAGCATCCAAAAATGCATCTGCAAAGCAGAACAAAAATTGAGAGATTGTGCAGAACCTATTTGGCAATGTGATAAGGTTTGCAACAAATCGTTCAGCTGTGGGCATCACAAATGCGAGAAGATTTGTCATGATGGAGCTTGTGGTGATTGCCCTTTGACTAATCTTAGAACGTGTCCTTGTGGAAAGCAGATATTCCAACTACCATGCACCCAAGACACTCCTAGCTGTCAAGATACTTGtgaaaaaattttggagtgTGGTATGCATACCTGCAATGAGAGATGTCACAAGGATAAATGTGGACTGtgcCTGGAAACTGTTGTTAAGTCCTGTTCTTGTGGCTTACATTGCAAAGAAGTTCAATGTTACAAGGCATACTTTTGTGAAACCAAATGCAAGAGAATGAGAGACTGTAATAAACATCCTTGCAATAGAAAGtgcTGTGATGGAAACTGTCCCCCTTGTGAAAAGCCATGTGGCCGTACTTTGAACTGTGGCAACCACAAATGTACCTCGGTTTGCCATAGAGGTCCTTGTTATCCTTGCTCTCAGACTGATTTGGTAACATGCAGATGTGGGTTCACCAAAATCCAAGTACCATGCGGTAGAAAGCATAAGACTAAACCACCAAGGTGTAATCAACCATGCATGATACCTCCAGACTGCCACCACCCTAAAAGAGAAAACCATCGTTGTCATTCCGGCGAGTGTCCGCCTTGTAAACAAGTATGTGATAAACCACATCCAGATTGCTGCCACAGATGTCTTGCGCCTTGTCATTCTGCAGTCTTGGTGAAAGAAGAAACTCAGAAGGCTTCTATGCCCTGGGAACAAACTAAACCGCAGCTCAAAAGGGTAGCACTACCTTGTCCTGAATGCACTGTGCCTGTTCCTGTCACATGCTTAGGAGGACATGAAACAGTGGACTGGCCGTGCCATCAAGCCAAACCATCTAGCTGTCAAAGACCCTGTGGGAGAATGTTGACCTGTACAAATCACACGTGCACATTGCCTTGCCATACGGTTATAGGGACGACTGATACAGTGAAGGCAGGTGAAAATTGCGAGCAATGCGAAAATCCCTGTCTAAAAGAGAGACCAGAAGGCTGTCAACACGAGTGTCCTAATCCATGTCATCCTGGTATTTGTAAGCCTTGCAAGCAAATGATACGCATAAAATGCCATTGTGGACTAAATCAACTATATGTCACTTGTGCTGACTGGCTGGATCCTGCGAAGCGAGATCAATTGCAGTGTTGTGGAAACCAATGTCCCAAAAATTATCAATGTGGCCACAGGTGCAAAGCGGACTGCCATTCTGGTCCTTGTCCCAATGCCGAACAGTGCAAGAAGAAAGTTAAGATGACTTGCAAATGTAAGAGGATCAAAAAGGAGTTTTCCTGTGAATTTGTACGCACCAAACAAGTGAAGGTTGAGTGTGACGAGATCTGCAAAGAGAAGAAGGAAGAAGAAAGACTGAGAAGAGAGGAACTTGAGCAGCAGAAGAAATTGGAAGAAGACGAGaagaataaaaaagaattaGAGAAGTACTTAAAGATGTTTGAAGGCAAAAAGAAGAGCAAAGTGAAAGAAGTACAGGAAGACACAGAAACTACTgggtttttcagaaaatataaagtTATTATTTCGTCATGTGTGATTTTTGTGGTTGTTACTTGGGTTTTGAACCTCCGTTGA
- Protein Sequence
- MHSQQKHKNPWNRNNSRGNKTPNQRRTGNFNNDPTPSEDRFKKAQSKLQAAVQKHIEEFESSSEEEEEVLSINLIETILKNYKSSTGENENLGRTQNFIEQAFTAGASTCLICISRVKRDNQIWSCTNCFAPFHLLCIQRWSKDTLTQQKQALEEQTAPKGKQLAWCCPKCRQEYEVDQVPKKYLCFCGKKENPKYDPYLVPHSCGEMCKKNLIPNCGHKCLLLCHPGPCPPCPATVSVTCYCKSQPPQIRRCSNREWSCGNKCGKLLSCNKHSCSEPCHPGECKPCPKKSIQKCICKAEQKLRDCAEPIWQCDKVCNKSFSCGHHKCEKICHDGACGDCPLTNLRTCPCGKQIFQLPCTQDTPSCQDTCEKILECGMHTCNERCHKDKCGLCLETVVKSCSCGLHCKEVQCYKAYFCETKCKRMRDCNKHPCNRKCCDGNCPPCEKPCGRTLNCGNHKCTSVCHRGPCYPCSQTDLVTCRCGFTKIQVPCGRKHKTKPPRCNQPCMIPPDCHHPKRENHRCHSGECPPCKQVCDKPHPDCCHRCLAPCHSAVLVKEETQKASMPWEQTKPQLKRVALPCPECTVPVPVTCLGGHETVDWPCHQAKPSSCQRPCGRMLTCTNHTCTLPCHTVIGTTDTVKAGENCEQCENPCLKERPEGCQHECPNPCHPGICKPCKQMIRIKCHCGLNQLYVTCADWLDPAKRDQLQCCGNQCPKNYQCGHRCKADCHSGPCPNAEQCKKKVKMTCKCKRIKKEFSCEFVRTKQVKVECDEICKEKKEEERLRREELEQQKKLEEDEKNKKELEKYLKMFEGKKKSKVKEVQEDTETTGFFRKYKVIISSCVIFVVVTWVLNLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00261087;
- 90% Identity
- -
- 80% Identity
- -