Cmac001672.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Callosobruchus maculatus
Gene Symbol
-
Assembly
GCA_900659725.1
Location
CAACVG010001960.1:24640-52937[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 0.0042 0.3 11.8 2.8 1 23 187 209 187 209 0.98
2 37 0.018 1.3 9.8 6.7 1 23 290 312 290 312 0.98
3 37 0.0082 0.58 10.8 0.4 3 23 325 346 323 346 0.90
4 37 0.007 0.5 11.1 3.3 1 23 358 380 358 380 0.97
5 37 0.12 8.7 7.1 0.5 3 23 393 414 391 414 0.90
6 37 0.0014 0.1 13.2 4.4 1 23 426 449 426 449 0.97
7 37 0.0065 0.46 11.2 0.8 3 23 461 482 459 482 0.92
8 37 0.22 16 6.3 4.5 1 23 494 517 494 517 0.97
9 37 0.00024 0.017 15.7 1.7 1 23 561 583 561 583 0.98
10 37 0.0091 0.64 10.7 0.3 3 23 596 617 595 617 0.90
11 37 6.8 4.8e+02 1.7 8.4 1 23 629 652 629 653 0.96
12 37 0.0042 0.3 11.8 2.8 1 23 725 747 725 747 0.98
13 37 6.9 4.9e+02 1.6 4.6 1 23 754 776 754 776 0.97
14 37 0.014 0.99 10.1 5.4 1 23 828 850 828 850 0.98
15 37 0.0029 0.21 12.3 0.7 2 23 858 880 857 880 0.94
16 37 0.018 1.2 9.8 2.2 1 23 892 914 892 914 0.98
17 37 0.012 0.87 10.3 0.8 3 23 927 948 926 948 0.90
18 37 0.0059 0.42 11.3 3.7 1 23 960 983 960 983 0.97
19 37 0.0024 0.17 12.5 0.8 3 23 995 1016 993 1016 0.92
20 37 0.017 1.2 9.9 3.6 1 23 1028 1050 1028 1050 0.97
21 37 0.12 8.7 7.1 0.5 3 23 1063 1084 1061 1084 0.90
22 37 0.14 10 6.9 4.6 1 23 1096 1118 1096 1118 0.97
23 37 0.0029 0.21 12.3 0.7 2 23 1130 1152 1129 1152 0.94
24 37 0.13 8.9 7.1 3.9 1 23 1164 1186 1164 1186 0.97
25 37 0.0029 0.2 12.3 0.7 3 23 1199 1220 1198 1220 0.92
26 37 0.0025 0.17 12.5 2.8 1 23 1266 1288 1266 1288 0.98
27 37 6.9 4.9e+02 1.6 4.6 1 23 1295 1317 1295 1317 0.97
28 37 0.03 2.1 9.1 6.5 1 23 1369 1391 1369 1391 0.98
29 37 0.00018 0.013 16.0 1.2 2 23 1399 1421 1398 1421 0.94
30 37 0.094 6.7 7.5 2.8 1 23 1433 1456 1433 1456 0.97
31 37 0.052 3.7 8.3 2.1 3 23 1467 1488 1466 1488 0.90
32 37 0.0041 0.29 11.8 2.8 1 23 1500 1522 1500 1522 0.98
33 37 0.024 1.7 9.4 0.3 3 23 1531 1552 1529 1552 0.92
34 37 0.65 46 4.9 4.2 1 23 1564 1587 1564 1587 0.96
35 37 3.8 2.6e+02 2.5 6.1 1 23 1631 1654 1631 1654 0.95
36 37 0.005 0.35 11.5 1.6 3 23 1666 1687 1664 1687 0.92
37 37 0.008 0.56 10.9 3.6 1 23 1699 1721 1699 1721 0.97

Sequence Information

Coding Sequence
ATGGACCAAGAGGTTAAGATTGAGGAATCCGAGATCGAATTAGCTGGAGAACAGCTTAAATCCTTAGATGTCATATGGTCTGCTGAAGAATTAGATACAAAAACTGAAATTAGGACAAGTGCATCCGCTGTAggagtagatatcaaaaatgagATTGATACAGATGGACAGACAGAGAGGATAAAACGTGAAAATCAGGACTGTACTGATCCACCGATAATTCCAGACAAAGTTGTCAAAACCGAAAAGGATGAACTAGAAATGCACGTTGATGAAGCATGTTACCTAGGTACTCTGCAGCTAAATGAAGAATTGAAGATCAATAATGAGATTTGTGCAGACCTAAAATCATCGTATCCAGATTCCATGAGGATAAAAGCTGAACACAAAACTGAAGAATCGAATGAATGCCTAGCTGAACAGCTTCATACGGAGTTTGATATGAAGAGCGAAAGTGATTCGAGCACCTTTGCTGTACCATCATCAAGTGTCACGAAAAATGAATTACCAGGGAAAGATCAAGAAGTAGTAGCTGATAAGGAGACTGATGGGGAAACATTTGTTTGCTATCACTGCGAATACGCCGCTAGAAGTAAACGACATTTGGTTGATCACATGAAAGTACATAGGGACAGGAGATATATTTACAGCTGTTGTTGTTGCGATTTTCGAACAAATTCAGGAATATTGTTTACCATCCACAATAAGACACATTCATCAGAGAGTAAGCAGTTCGAAGCGTTACATCTAAAAGAGGAAAATATGGATGACAATTTTAGTCAAGGGAATACCATGTTGATTGATTCAGAAACTAGTGTAGTGAATAAAAGGTCCAGTAGAGCCAGAGAATCAGTTATTCATCAAGTTCACCGATGTACAAAGTGCAATTATAAAACTATCAGTACCATGCATTTGAAGCGACATATGGTAACACATTCTCATATACCTGATGATAATCGTATAGCCACGAGATGCATCTACTGTGATAAGACATTTGTACAAAAGGTATCACTAGATGATCACATAGTTAGaagacatcctgattttatagcatcgggTAGCAGCAAAGTCCACGAGTGTACgaagtgcacttataaaactgtTTACACCAGTGATTTGAAGCAACATATGGTAACACATTCTGATATAGCCGATAAGAATCATATAGATAGTAGATGCATCTACTGTGATACGACATTTGCACGTAAGCTATCACTAGATGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGCAAGGTCCACGAGTGTACgaagtgcacttataaaactacgaAACCTTCAAATTTCAGGCGACATTTAATTACGAATCATCCCGAAATAGCTGGTAATCGCATTCTTAGtagatgtatctactgtaaTAAGACATTTAAATATAAACAAGGGCTGGATAAtcacataataaaaatacatccgGATTTTACAGCATCGGTTAGCAGCAAAGTCCACGAGTGTACGAAGTGCACTTATAAAAGTACGAGTACTACAAGTATCAGGCGACATTTAAATACGAATCACCCCGAGATAGCTGGTAATGTAGTTAGTAGCTGTATTCactgtaataaaatattttcatgtaaaaaagcACTAGACGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGCAAAATCTTCGAGTGTAAGAAGTGTACTTATAAAACTGTCTTCGCCAGTGATTTGAAGCGACATATGGTAACACATTCTCATATAGCCGATAATAATCGTATATCCAGGAGATGCATCTACTGTGATAAGACATTTGTACAAAAGGTATCACTAGACGATCACATAGTTAGAACACATCccgattttatagcatcggttaGCAGCAAGGTCCACGAGTGTACgaagtgcacttataaaactacgaATGCTCAATGTATCAGGGACCATTTAAGGAAAAAACATCACGAGATAGCTGGTGATCGAATTCTTAGtagatgtatctactgtaaTAAAATAGTTGCATGTAAACAGGCACTAAACGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCTGCAAAGTCTTCGAGTGTAAGAATGTCACGAAAAATGAATTACCAGGGAAAGATCAAGAAGTAGTAGCTGATAAGGAGACTGATGGGGAAACATTTGTTTGCTATCACTGCGAATACGCCGCTAGAAGTAAACGACATTTGGTTGATCACATGAAAGTGCATCAGAACaggaaatatatttacagctgtTGTTATTGCGATTTCCGAACAAATTCAGGAATATTGTTTACTACCCACAATAAGACGCATTCTTTAGAGAGTAAGCAGTTCGAAGCGTTACATGTAAAAGAGCAAAATATGGATGACAATTTTAATCAAGGGAATGccatgttgattgactcagaaacTAGTGTAGTAAATAAAAGGTCCAGTAGAGCCAGAGAATCAGTTAGTAGCAAAGTTCACCAGTGTACAAAGTGCAATTATAAAACTACCAAAACCGAATATTTGAAGCGACATTTGGTAACACATTCTGATAATCGTATAATCAGTAGATGCTTATACTGTAATAAACCATTTACACGTAAACTAACACTAGATGACCATATAGTAAGAAgtcatcctgattttatagcatcggttaGCAGCAAAGTCTACGAGTGTACgaagtgcacttataaaactgtCATTTCTCATGATTTGAAACTACATATGGTAACGCATTCTCATATAGCCGATAATAATCGTATAGCCAGGAGATGCATCTACTGTGATAAGACATTTAAATCTAAACAAGGGCTGGATGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGGACTGTCCACGAGTGTACgaagtgcacttataaaactacgaAACCTTCAAATTTCAGGCTACATTTAATTACGAATCATCCCGAAATAGCTGATAATCGCATTCTTAGtagatgtatctactgtaataagacatttaaaaataaacaaggGCTGGATAAtcacataataaaaatacatccgGATTTTACAGCATCGGTTAGCAGCAAAGTCCACGAGTGTACgaagtgcacttataaaactgtTTACACCAGTGATTTGAAGCAACATATGGTAAAACATTCTGATATAGCCGATAAGAATCATATAAATAGTAGATGCATCTACTGTGATACGACATTTGCACGTAAGCTATCACTAGATGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGGACTGTCCACGAGTGTAGgaagtgcacttataaaactgtTTACACCAGTTATTTGAAGCAACATATGGTAAAACATTCTGATATAGCCGATAAGAATCGTATAATCAGTAGATGCTTATACTGTAATAAACCATTTACACGTAAACTAACACTAGATGACCATATAGTAAGAAgtcatcctgattttatagcatccGTCAGTGGGAAAGTCCACGAGTGTACgaagtgcacttataaaactgtCATTTCTCATGATTTGAAACTACATATGGTAACGCATTCTCATATAGCCGATAATAATCGTATAGCCGGGAGATGCATCTACTGTGATAAGACATTTAAACGTAAACAAGGACTGGATGATCACATAATAAAAATGCATCCAGATTTCACAGCATCGGTTAGCAGCAAGGTCCACGATTGTACGAAGTGCGCTTATAAAACTACTCTCACGGAAAATGAATTACCGAGGACAGATCAAGAAGTAGTAGCTGATAAGGAGACCGATGGGGACACATTTGTTTGCTATCACTGCGAATACGCCGCTAGAAGTAAACGACATTTGATTGATCACATGAAAGTGCATAGGAACaagaaatatatttacagctgtTGTTATTGCGATTTCCGAACAAATTCAGGAATATTGTTTACCACCCACAATAAGACACATTCTTTAGACAGTAAGCAGTTCGAAGCGTTACATGTAAAAGAGGAAAATATGGATGACAATTTTAGTCAAGGGAATAccatgttgattgactcagaaacTAGTGTAGTAAATGAAAGGTCCAGTAGAGCCGGAGAATCAGTTAGTAGCAAAGTTCACCAGTGTACAAAGTGCAATTATAAAACTACCAAAACCAAATATTTGAAGCGACATTTGGTAACACATTCTGATAATCGTATAATCAGTAGATGCTTATACTGTAATAAAACATTTACACGTAAAGAAACACTAGATGATCATATAGTAAGAAgtcatcctgattttatagcatccGTCAGTAAGAAAGCCCACGAGTGTACgaagtgcacttataaaactacgaTTTCTTCAAATATCAGGCAACATTTAATTACGAATCATCCCGAGATAGCTGGTAATGTAGTTAGTAGCTGTATTCactgtaataaaatattttcacgtaaACAAACACTAGACGATCACATAGTAAGaagacatcctgattttatagcatcggttaGCAGCAAAGTCTACGAGTGTACgaagtgcacttataaaactgtCATTTCTCATGATTTGAAGCGACATATGGTAACGCATTCTGATAATCGTATAATCAGTAGATGCATCTACTGTGATAAGACGTTTAAAGGTAAACAAGGACTGGATGAtcacataataaaaatacatccgGATTTTACAGCATCGGTTAGCAGCAAAGTCCACGAGTGTACgaagtgcacttataaaactacgaGTACTACAAGCATCAGGCAACATTTAAATTCGAATCATCCCGAGATAGCTGGTAATGTAGTTAGTAGCTGTATTCactgtaataaaatattttcatgtaaacAAGCACTAGACCATCACATAGTTAGAAGACATCCCGATTTTGTAGCATCGGTTAGCAGCAAAGTACACGAGTGTACgaagtgcacttataaaactacgaAGGCTCAATGTTTCCGGGACCATTTATTGATCAAACATCCCGAGATAGCTGGTAATCGCATTCTTAGtagatgtatctactgtaataaaacatttaaatatAAACAAGGACTGAATTATCACATAATAAAaagacatcctgattttatagcatcggttaGCAGCAAAGTCCACGAGTGTACGAAGTGCAGTTTTAAAACTGTTTACACCAGTGATTTGAAGCGACATATGGTAACACATTCTCATATCGCCGATAATAATCAATGA
Protein Sequence
MDQEVKIEESEIELAGEQLKSLDVIWSAEELDTKTEIRTSASAVGVDIKNEIDTDGQTERIKRENQDCTDPPIIPDKVVKTEKDELEMHVDEACYLGTLQLNEELKINNEICADLKSSYPDSMRIKAEHKTEESNECLAEQLHTEFDMKSESDSSTFAVPSSSVTKNELPGKDQEVVADKETDGETFVCYHCEYAARSKRHLVDHMKVHRDRRYIYSCCCCDFRTNSGILFTIHNKTHSSESKQFEALHLKEENMDDNFSQGNTMLIDSETSVVNKRSSRARESVIHQVHRCTKCNYKTISTMHLKRHMVTHSHIPDDNRIATRCIYCDKTFVQKVSLDDHIVRRHPDFIASGSSKVHECTKCTYKTVYTSDLKQHMVTHSDIADKNHIDSRCIYCDTTFARKLSLDDHIVRRHPDFIASVSSKVHECTKCTYKTTKPSNFRRHLITNHPEIAGNRILSRCIYCNKTFKYKQGLDNHIIKIHPDFTASVSSKVHECTKCTYKSTSTTSIRRHLNTNHPEIAGNVVSSCIHCNKIFSCKKALDDHIVRRHPDFIASVSSKIFECKKCTYKTVFASDLKRHMVTHSHIADNNRISRRCIYCDKTFVQKVSLDDHIVRTHPDFIASVSSKVHECTKCTYKTTNAQCIRDHLRKKHHEIAGDRILSRCIYCNKIVACKQALNDHIVRRHPDFIASVSCKVFECKNVTKNELPGKDQEVVADKETDGETFVCYHCEYAARSKRHLVDHMKVHQNRKYIYSCCYCDFRTNSGILFTTHNKTHSLESKQFEALHVKEQNMDDNFNQGNAMLIDSETSVVNKRSSRARESVSSKVHQCTKCNYKTTKTEYLKRHLVTHSDNRIISRCLYCNKPFTRKLTLDDHIVRSHPDFIASVSSKVYECTKCTYKTVISHDLKLHMVTHSHIADNNRIARRCIYCDKTFKSKQGLDDHIVRRHPDFIASVSRTVHECTKCTYKTTKPSNFRLHLITNHPEIADNRILSRCIYCNKTFKNKQGLDNHIIKIHPDFTASVSSKVHECTKCTYKTVYTSDLKQHMVKHSDIADKNHINSRCIYCDTTFARKLSLDDHIVRRHPDFIASVSRTVHECRKCTYKTVYTSYLKQHMVKHSDIADKNRIISRCLYCNKPFTRKLTLDDHIVRSHPDFIASVSGKVHECTKCTYKTVISHDLKLHMVTHSHIADNNRIAGRCIYCDKTFKRKQGLDDHIIKMHPDFTASVSSKVHDCTKCAYKTTLTENELPRTDQEVVADKETDGDTFVCYHCEYAARSKRHLIDHMKVHRNKKYIYSCCYCDFRTNSGILFTTHNKTHSLDSKQFEALHVKEENMDDNFSQGNTMLIDSETSVVNERSSRAGESVSSKVHQCTKCNYKTTKTKYLKRHLVTHSDNRIISRCLYCNKTFTRKETLDDHIVRSHPDFIASVSKKAHECTKCTYKTTISSNIRQHLITNHPEIAGNVVSSCIHCNKIFSRKQTLDDHIVRRHPDFIASVSSKVYECTKCTYKTVISHDLKRHMVTHSDNRIISRCIYCDKTFKGKQGLDDHIIKIHPDFTASVSSKVHECTKCTYKTTSTTSIRQHLNSNHPEIAGNVVSSCIHCNKIFSCKQALDHHIVRRHPDFVASVSSKVHECTKCTYKTTKAQCFRDHLLIKHPEIAGNRILSRCIYCNKTFKYKQGLNYHIIKRHPDFIASVSSKVHECTKCSFKTVYTSDLKRHMVTHSHIADNNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00260801;
90% Identity
iTF_00260801;
80% Identity
iTF_00260801;