Cmac001672.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Callosobruchus maculatus
Gene Symbol
-
Assembly
GCA_900659725.1
Location
CAACVG010001960.1:24640-52937[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 4.7 4.1e+03 -2.0 0.2 16 25 186 195 179 209 0.67
2 37 0.0019 1.7 8.9 0.2 17 44 323 347 312 347 0.83
3 37 0.15 1.3e+02 2.8 2.1 14 41 355 379 349 388 0.87
4 37 0.005 4.4 7.5 0.3 17 44 391 415 379 415 0.81
5 37 0.00054 0.47 10.6 1.2 13 44 422 450 417 450 0.84
6 37 0.00035 0.31 11.2 0.6 18 44 460 483 458 483 0.91
7 37 0.0022 1.9 8.7 3.3 14 44 491 518 485 518 0.77
8 37 0.00065 0.57 10.4 1.7 18 44 527 550 523 550 0.94
9 37 0.57 5e+02 0.9 1.0 13 41 557 582 552 586 0.78
10 37 0.0096 8.4 6.6 0.8 16 44 593 618 574 618 0.77
11 37 0.28 2.5e+02 1.9 5.6 14 43 626 652 620 653 0.81
12 37 0.004 3.5 7.8 1.1 18 44 663 686 658 686 0.94
13 37 5.3 4.6e+03 -2.2 0.8 16 32 724 741 717 751 0.65
14 37 0.49 4.3e+02 1.1 3.8 14 41 825 849 820 852 0.86
15 37 0.0019 1.7 8.9 0.3 18 44 858 881 849 881 0.88
16 37 3.5 3.1e+03 -1.6 1.3 13 40 888 912 883 917 0.75
17 37 5.3e-05 0.046 13.8 0.4 17 44 925 949 912 949 0.85
18 37 0.01 9.1 6.5 1.0 13 44 956 984 951 984 0.85
19 37 0.00068 0.59 10.3 0.9 18 44 994 1017 990 1017 0.91
20 37 0.13 1.2e+02 2.9 1.8 14 41 1025 1049 1019 1050 0.86
21 37 0.0013 1.1 9.4 0.7 5 44 1049 1085 1048 1085 0.87
22 37 0.045 39 4.5 3.0 13 41 1092 1117 1087 1119 0.86
23 37 0.00066 0.58 10.3 0.4 6 44 1118 1153 1117 1153 0.82
24 37 5.9 5.2e+03 -2.3 0.5 14 40 1161 1184 1156 1188 0.73
25 37 0.00013 0.12 12.6 0.3 18 44 1198 1221 1184 1221 0.86
26 37 7.9 7e+03 -2.7 1.0 17 29 1266 1278 1259 1291 0.66
27 37 0.37 3.3e+02 1.5 5.1 14 41 1366 1390 1362 1395 0.87
28 37 7.2e-05 0.064 13.4 0.4 18 44 1399 1422 1391 1422 0.91
29 37 0.0014 1.3 9.3 2.0 14 44 1430 1457 1424 1457 0.86
30 37 1.3e-05 0.012 15.7 0.6 18 44 1466 1489 1462 1489 0.94
31 37 0.33 2.9e+02 1.7 1.7 13 41 1496 1521 1491 1526 0.85
32 37 0.0023 2 8.6 0.2 18 44 1530 1553 1521 1553 0.86
33 37 0.0026 2.2 8.4 2.7 14 44 1561 1588 1555 1588 0.82
34 37 0.0015 1.3 9.2 3.7 18 44 1597 1620 1593 1620 0.94
35 37 0.17 1.5e+02 2.6 1.0 11 44 1627 1655 1621 1655 0.82
36 37 5.2e-05 0.045 13.9 1.4 18 44 1665 1688 1662 1688 0.96
37 37 0.051 44 4.3 1.8 13 41 1695 1720 1690 1723 0.84

Sequence Information

Coding Sequence
ATGGACCAAGAGGTTAAGATTGAGGAATCCGAGATCGAATTAGCTGGAGAACAGCTTAAATCCTTAGATGTCATATGGTCTGCTGAAGAATTAGATACAAAAACTGAAATTAGGACAAGTGCATCCGCTGTAggagtagatatcaaaaatgagATTGATACAGATGGACAGACAGAGAGGATAAAACGTGAAAATCAGGACTGTACTGATCCACCGATAATTCCAGACAAAGTTGTCAAAACCGAAAAGGATGAACTAGAAATGCACGTTGATGAAGCATGTTACCTAGGTACTCTGCAGCTAAATGAAGAATTGAAGATCAATAATGAGATTTGTGCAGACCTAAAATCATCGTATCCAGATTCCATGAGGATAAAAGCTGAACACAAAACTGAAGAATCGAATGAATGCCTAGCTGAACAGCTTCATACGGAGTTTGATATGAAGAGCGAAAGTGATTCGAGCACCTTTGCTGTACCATCATCAAGTGTCACGAAAAATGAATTACCAGGGAAAGATCAAGAAGTAGTAGCTGATAAGGAGACTGATGGGGAAACATTTGTTTGCTATCACTGCGAATACGCCGCTAGAAGTAAACGACATTTGGTTGATCACATGAAAGTACATAGGGACAGGAGATATATTTACAGCTGTTGTTGTTGCGATTTTCGAACAAATTCAGGAATATTGTTTACCATCCACAATAAGACACATTCATCAGAGAGTAAGCAGTTCGAAGCGTTACATCTAAAAGAGGAAAATATGGATGACAATTTTAGTCAAGGGAATACCATGTTGATTGATTCAGAAACTAGTGTAGTGAATAAAAGGTCCAGTAGAGCCAGAGAATCAGTTATTCATCAAGTTCACCGATGTACAAAGTGCAATTATAAAACTATCAGTACCATGCATTTGAAGCGACATATGGTAACACATTCTCATATACCTGATGATAATCGTATAGCCACGAGATGCATCTACTGTGATAAGACATTTGTACAAAAGGTATCACTAGATGATCACATAGTTAGaagacatcctgattttatagcatcgggTAGCAGCAAAGTCCACGAGTGTACgaagtgcacttataaaactgtTTACACCAGTGATTTGAAGCAACATATGGTAACACATTCTGATATAGCCGATAAGAATCATATAGATAGTAGATGCATCTACTGTGATACGACATTTGCACGTAAGCTATCACTAGATGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGCAAGGTCCACGAGTGTACgaagtgcacttataaaactacgaAACCTTCAAATTTCAGGCGACATTTAATTACGAATCATCCCGAAATAGCTGGTAATCGCATTCTTAGtagatgtatctactgtaaTAAGACATTTAAATATAAACAAGGGCTGGATAAtcacataataaaaatacatccgGATTTTACAGCATCGGTTAGCAGCAAAGTCCACGAGTGTACGAAGTGCACTTATAAAAGTACGAGTACTACAAGTATCAGGCGACATTTAAATACGAATCACCCCGAGATAGCTGGTAATGTAGTTAGTAGCTGTATTCactgtaataaaatattttcatgtaaaaaagcACTAGACGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGCAAAATCTTCGAGTGTAAGAAGTGTACTTATAAAACTGTCTTCGCCAGTGATTTGAAGCGACATATGGTAACACATTCTCATATAGCCGATAATAATCGTATATCCAGGAGATGCATCTACTGTGATAAGACATTTGTACAAAAGGTATCACTAGACGATCACATAGTTAGAACACATCccgattttatagcatcggttaGCAGCAAGGTCCACGAGTGTACgaagtgcacttataaaactacgaATGCTCAATGTATCAGGGACCATTTAAGGAAAAAACATCACGAGATAGCTGGTGATCGAATTCTTAGtagatgtatctactgtaaTAAAATAGTTGCATGTAAACAGGCACTAAACGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCTGCAAAGTCTTCGAGTGTAAGAATGTCACGAAAAATGAATTACCAGGGAAAGATCAAGAAGTAGTAGCTGATAAGGAGACTGATGGGGAAACATTTGTTTGCTATCACTGCGAATACGCCGCTAGAAGTAAACGACATTTGGTTGATCACATGAAAGTGCATCAGAACaggaaatatatttacagctgtTGTTATTGCGATTTCCGAACAAATTCAGGAATATTGTTTACTACCCACAATAAGACGCATTCTTTAGAGAGTAAGCAGTTCGAAGCGTTACATGTAAAAGAGCAAAATATGGATGACAATTTTAATCAAGGGAATGccatgttgattgactcagaaacTAGTGTAGTAAATAAAAGGTCCAGTAGAGCCAGAGAATCAGTTAGTAGCAAAGTTCACCAGTGTACAAAGTGCAATTATAAAACTACCAAAACCGAATATTTGAAGCGACATTTGGTAACACATTCTGATAATCGTATAATCAGTAGATGCTTATACTGTAATAAACCATTTACACGTAAACTAACACTAGATGACCATATAGTAAGAAgtcatcctgattttatagcatcggttaGCAGCAAAGTCTACGAGTGTACgaagtgcacttataaaactgtCATTTCTCATGATTTGAAACTACATATGGTAACGCATTCTCATATAGCCGATAATAATCGTATAGCCAGGAGATGCATCTACTGTGATAAGACATTTAAATCTAAACAAGGGCTGGATGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGGACTGTCCACGAGTGTACgaagtgcacttataaaactacgaAACCTTCAAATTTCAGGCTACATTTAATTACGAATCATCCCGAAATAGCTGATAATCGCATTCTTAGtagatgtatctactgtaataagacatttaaaaataaacaaggGCTGGATAAtcacataataaaaatacatccgGATTTTACAGCATCGGTTAGCAGCAAAGTCCACGAGTGTACgaagtgcacttataaaactgtTTACACCAGTGATTTGAAGCAACATATGGTAAAACATTCTGATATAGCCGATAAGAATCATATAAATAGTAGATGCATCTACTGTGATACGACATTTGCACGTAAGCTATCACTAGATGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGGACTGTCCACGAGTGTAGgaagtgcacttataaaactgtTTACACCAGTTATTTGAAGCAACATATGGTAAAACATTCTGATATAGCCGATAAGAATCGTATAATCAGTAGATGCTTATACTGTAATAAACCATTTACACGTAAACTAACACTAGATGACCATATAGTAAGAAgtcatcctgattttatagcatccGTCAGTGGGAAAGTCCACGAGTGTACgaagtgcacttataaaactgtCATTTCTCATGATTTGAAACTACATATGGTAACGCATTCTCATATAGCCGATAATAATCGTATAGCCGGGAGATGCATCTACTGTGATAAGACATTTAAACGTAAACAAGGACTGGATGATCACATAATAAAAATGCATCCAGATTTCACAGCATCGGTTAGCAGCAAGGTCCACGATTGTACGAAGTGCGCTTATAAAACTACTCTCACGGAAAATGAATTACCGAGGACAGATCAAGAAGTAGTAGCTGATAAGGAGACCGATGGGGACACATTTGTTTGCTATCACTGCGAATACGCCGCTAGAAGTAAACGACATTTGATTGATCACATGAAAGTGCATAGGAACaagaaatatatttacagctgtTGTTATTGCGATTTCCGAACAAATTCAGGAATATTGTTTACCACCCACAATAAGACACATTCTTTAGACAGTAAGCAGTTCGAAGCGTTACATGTAAAAGAGGAAAATATGGATGACAATTTTAGTCAAGGGAATAccatgttgattgactcagaaacTAGTGTAGTAAATGAAAGGTCCAGTAGAGCCGGAGAATCAGTTAGTAGCAAAGTTCACCAGTGTACAAAGTGCAATTATAAAACTACCAAAACCAAATATTTGAAGCGACATTTGGTAACACATTCTGATAATCGTATAATCAGTAGATGCTTATACTGTAATAAAACATTTACACGTAAAGAAACACTAGATGATCATATAGTAAGAAgtcatcctgattttatagcatccGTCAGTAAGAAAGCCCACGAGTGTACgaagtgcacttataaaactacgaTTTCTTCAAATATCAGGCAACATTTAATTACGAATCATCCCGAGATAGCTGGTAATGTAGTTAGTAGCTGTATTCactgtaataaaatattttcacgtaaACAAACACTAGACGATCACATAGTAAGaagacatcctgattttatagcatcggttaGCAGCAAAGTCTACGAGTGTACgaagtgcacttataaaactgtCATTTCTCATGATTTGAAGCGACATATGGTAACGCATTCTGATAATCGTATAATCAGTAGATGCATCTACTGTGATAAGACGTTTAAAGGTAAACAAGGACTGGATGAtcacataataaaaatacatccgGATTTTACAGCATCGGTTAGCAGCAAAGTCCACGAGTGTACgaagtgcacttataaaactacgaGTACTACAAGCATCAGGCAACATTTAAATTCGAATCATCCCGAGATAGCTGGTAATGTAGTTAGTAGCTGTATTCactgtaataaaatattttcatgtaaacAAGCACTAGACCATCACATAGTTAGAAGACATCCCGATTTTGTAGCATCGGTTAGCAGCAAAGTACACGAGTGTACgaagtgcacttataaaactacgaAGGCTCAATGTTTCCGGGACCATTTATTGATCAAACATCCCGAGATAGCTGGTAATCGCATTCTTAGtagatgtatctactgtaataaaacatttaaatatAAACAAGGACTGAATTATCACATAATAAAaagacatcctgattttatagcatcggttaGCAGCAAAGTCCACGAGTGTACGAAGTGCAGTTTTAAAACTGTTTACACCAGTGATTTGAAGCGACATATGGTAACACATTCTCATATCGCCGATAATAATCAATGA
Protein Sequence
MDQEVKIEESEIELAGEQLKSLDVIWSAEELDTKTEIRTSASAVGVDIKNEIDTDGQTERIKRENQDCTDPPIIPDKVVKTEKDELEMHVDEACYLGTLQLNEELKINNEICADLKSSYPDSMRIKAEHKTEESNECLAEQLHTEFDMKSESDSSTFAVPSSSVTKNELPGKDQEVVADKETDGETFVCYHCEYAARSKRHLVDHMKVHRDRRYIYSCCCCDFRTNSGILFTIHNKTHSSESKQFEALHLKEENMDDNFSQGNTMLIDSETSVVNKRSSRARESVIHQVHRCTKCNYKTISTMHLKRHMVTHSHIPDDNRIATRCIYCDKTFVQKVSLDDHIVRRHPDFIASGSSKVHECTKCTYKTVYTSDLKQHMVTHSDIADKNHIDSRCIYCDTTFARKLSLDDHIVRRHPDFIASVSSKVHECTKCTYKTTKPSNFRRHLITNHPEIAGNRILSRCIYCNKTFKYKQGLDNHIIKIHPDFTASVSSKVHECTKCTYKSTSTTSIRRHLNTNHPEIAGNVVSSCIHCNKIFSCKKALDDHIVRRHPDFIASVSSKIFECKKCTYKTVFASDLKRHMVTHSHIADNNRISRRCIYCDKTFVQKVSLDDHIVRTHPDFIASVSSKVHECTKCTYKTTNAQCIRDHLRKKHHEIAGDRILSRCIYCNKIVACKQALNDHIVRRHPDFIASVSCKVFECKNVTKNELPGKDQEVVADKETDGETFVCYHCEYAARSKRHLVDHMKVHQNRKYIYSCCYCDFRTNSGILFTTHNKTHSLESKQFEALHVKEQNMDDNFNQGNAMLIDSETSVVNKRSSRARESVSSKVHQCTKCNYKTTKTEYLKRHLVTHSDNRIISRCLYCNKPFTRKLTLDDHIVRSHPDFIASVSSKVYECTKCTYKTVISHDLKLHMVTHSHIADNNRIARRCIYCDKTFKSKQGLDDHIVRRHPDFIASVSRTVHECTKCTYKTTKPSNFRLHLITNHPEIADNRILSRCIYCNKTFKNKQGLDNHIIKIHPDFTASVSSKVHECTKCTYKTVYTSDLKQHMVKHSDIADKNHINSRCIYCDTTFARKLSLDDHIVRRHPDFIASVSRTVHECRKCTYKTVYTSYLKQHMVKHSDIADKNRIISRCLYCNKPFTRKLTLDDHIVRSHPDFIASVSGKVHECTKCTYKTVISHDLKLHMVTHSHIADNNRIAGRCIYCDKTFKRKQGLDDHIIKMHPDFTASVSSKVHDCTKCAYKTTLTENELPRTDQEVVADKETDGDTFVCYHCEYAARSKRHLIDHMKVHRNKKYIYSCCYCDFRTNSGILFTTHNKTHSLDSKQFEALHVKEENMDDNFSQGNTMLIDSETSVVNERSSRAGESVSSKVHQCTKCNYKTTKTKYLKRHLVTHSDNRIISRCLYCNKTFTRKETLDDHIVRSHPDFIASVSKKAHECTKCTYKTTISSNIRQHLITNHPEIAGNVVSSCIHCNKIFSRKQTLDDHIVRRHPDFIASVSSKVYECTKCTYKTVISHDLKRHMVTHSDNRIISRCIYCDKTFKGKQGLDDHIIKIHPDFTASVSSKVHECTKCTYKTTSTTSIRQHLNSNHPEIAGNVVSSCIHCNKIFSCKQALDHHIVRRHPDFVASVSSKVHECTKCTYKTTKAQCFRDHLLIKHPEIAGNRILSRCIYCNKTFKYKQGLNYHIIKRHPDFIASVSSKVHECTKCSFKTVYTSDLKRHMVTHSHIADNNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00260858;
90% Identity
iTF_00260858;
80% Identity
iTF_00260858;