Basic Information

Insect: Callosobruchus maculatus
Gene Symbol: -
Assembly: GCA_900659725.1
Location: CAACVG010007426.1:6806-37544[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.3 1.1e+03 -0.2 0.5 14 39 208 230 203 236 0.75

2 14 0.027 24 5.2 0.8 16 29 262 275 257 287 0.83

3 14 0.00031 0.27 11.4 6.1 9 41 292 319 282 321 0.83

4 14 7.8e-05 0.068 13.3 1.1 19 43 334 355 328 356 0.92

5 14 0.00072 0.63 10.2 6.1 10 43 362 390 357 391 0.82

6 14 0.031 27 5.0 0.7 19 43 404 425 398 426 0.78

7 14 0.0001 0.088 12.9 2.3 11 44 433 461 428 461 0.85

8 14 0.03 26 5.0 0.2 19 43 474 495 471 496 0.73

9 14 0.00072 0.63 10.2 0.1 10 30 502 520 498 526 0.80

10 14 0.002 1.8 8.8 6.8 17 43 537 560 528 563 0.86

11 14 0.022 19 5.5 2.3 14 29 566 581 559 593 0.68

12 14 0.00066 0.58 10.3 5.7 11 44 600 628 594 628 0.88

13 14 0.11 99 3.2 2.5 15 43 637 662 631 663 0.83

14 14 0.02 18 5.6 5.4 13 38 670 692 665 699 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.3	1.1e+03	-0.2	0.5	14	39	208	230	203	236	0.75
2	14	0.027	24	5.2	0.8	16	29	262	275	257	287	0.83
3	14	0.00031	0.27	11.4	6.1	9	41	292	319	282	321	0.83
4	14	7.8e-05	0.068	13.3	1.1	19	43	334	355	328	356	0.92
5	14	0.00072	0.63	10.2	6.1	10	43	362	390	357	391	0.82
6	14	0.031	27	5.0	0.7	19	43	404	425	398	426	0.78
7	14	0.0001	0.088	12.9	2.3	11	44	433	461	428	461	0.85
8	14	0.03	26	5.0	0.2	19	43	474	495	471	496	0.73
9	14	0.00072	0.63	10.2	0.1	10	30	502	520	498	526	0.80
10	14	0.002	1.8	8.8	6.8	17	43	537	560	528	563	0.86
11	14	0.022	19	5.5	2.3	14	29	566	581	559	593	0.68
12	14	0.00066	0.58	10.3	5.7	11	44	600	628	594	628	0.88
13	14	0.11	99	3.2	2.5	15	43	637	662	631	663	0.83
14	14	0.02	18	5.6	5.4	13	38	670	692	665	699	0.77

Sequence Information

Coding Sequence: ATGGAGGACAACATGCCACCAATTAAAGatgaaattggaaaaataaaaaaggaaagCTTTGCAGAAATAGATGTCCTACACAACACAGTTGATTCAGCGATCAAAACCGAGAGCTATGCATGTACAAATGGAATATGGGATTTGCCTTTCACAAGAGTGAAAGACGAGCAAAGCATGGAGAATTTGGAACAATGTGAACTGAATTTTGACACAAAGGAACACATAAAAATGGAAAACATAGCAGCAGTTGATGTTGAAGTACAGGAATCTGAAATGGACAGCTTGAAACTCGATATTCGGACTGAAGAACTGTACAAGTACATCAAACCTGACattgaaaatgttgaaaaatctGATGGAGTGAAAGAAGAGCAAAGCACAGAGGATAGAGAAAAATATGAACTGACTTGTGATACAAAAGAACACATAAACATCGAAGATATGTCAGCAGTTGATGTTAAAATTGAAGTACAGGAATCTGAAATCGACAGCCTGAAACAGGATATGCTGACTGAGGAGATAGATATCAAACCTGACATTGGAGATGATGCAGAATCATACGGtgGTGCAAAACAAACACTGAGTGAAGACAAACATGGAGTGGTGTATAGGAAGTCTGATGAAGACACCTTCGTCTGCTATATTTGCAATTTCATCGTTCACAGCAAGAAAGATTTGATAAATCACATCAACGTTTCAGGTTGTAGTTTAAAGAGTCGTGCTAAAAAAGCGTTAgctattaacaaaataatagaATATCCTGAAGCTCAGTATCCTGTTAAAAAAAGACAGTGTATTCATTGCAATGCGACATTCAAAAGTCAACAAGCTCTTGATGGCCATGTTATAAAATATCATGAAGAGTTTATTACATTTATTTCTTCTAAAATTTATCAGTGTAAACACTGTAGTTATAAAACCACAAAAACGACTAATTTAACTCGTCATTTAACGAAACATCCTGAATCTGGGTGTGGTGTTACACCTAAACAGTATCCTTGTAACCATTGCCATgcgatatttaaaagaaaaacatcTCTTGATGACCATATCATCAGAAATCACGAAGACTTTGTTACATCAGTTTCTTCTAAAATCCATCATTGTAAACATTGTAGttataaaactacaaatataacTAACTTGACTCGTCATTTGACGACTCTTCATGCTGAATATTGGTGTAGCGTTACACCTGAACAGTACCCTTGTGAACATTGCCATACGATCTTCACAAGGAAAATACATCTTGATGACCATATCGTCAAAAATCATGAAGCGGTTTTTACATCTGTTTCTTCTAGAATCCATCAGTGTAAATATTGTAGTTATAAAACTACCATGTCGTctaattttactcgtcatttgAAGAATCTTCATCCTGAATCTTGGCGTAGCATTGTATCTATACAGTATCCTTGTATCTATTGCGATGCGACATTTACAAGAAAAGAACATATtaacgaccatgtcgtcagaaATCATGAAGAATTGATTACACCTGTTTCTTCTGAAAATTGGCATTGTATTCATTGCAATGCGACATTCAAAAGTAAACAATCTCTTGATGGCCATGGAGAATTTATTACATCAGTTTCTTCTCCAATCCATCAGTGCAAACATTGTAGCTATAAAACTACAAAATCGACTAATTTGTCTCGTCATTTGACAAATGTTCATGAGTGTAGTGTTACACCTAATCAGTATGCTTGTAATCATTGCCATGCCATATTTAAAGTAAAAGAATCTCTTGATGGACATGTCCTCAGAAATCATGAAGAATTTATTACATCTGTTTCTTCTAAAATCCATCAGTGTAAACATTGTAATTATAAAACTACAATAATGGCTAACTTCACTCGTCATTTGACGAATTGTCATCCCGAATCTTGTTGTAGTGTTAGATCTAAACAGTATCCTTGTGACCATTGCCGTGCAATATTTAAAAGCAAAGCAGCTCTTGATGACCATATCATCAGAAATCATGAAGAGTTTATTTCATCAGTATCTTCTAAAATCCATCGGTGTAAACATTGCACTTATAAAACTTCAAATATAACTAATTTGACTCATCATTCGATGAAACATCTTGAATCTGGGTAA
Protein Sequence: MEDNMPPIKDEIGKIKKESFAEIDVLHNTVDSAIKTESYACTNGIWDLPFTRVKDEQSMENLEQCELNFDTKEHIKMENIAAVDVEVQESEMDSLKLDIRTEELYKYIKPDIENVEKSDGVKEEQSTEDREKYELTCDTKEHINIEDMSAVDVKIEVQESEIDSLKQDMLTEEIDIKPDIGDDAESYGGAKQTLSEDKHGVVYRKSDEDTFVCYICNFIVHSKKDLINHINVSGCSLKSRAKKALAINKIIEYPEAQYPVKKRQCIHCNATFKSQQALDGHVIKYHEEFITFISSKIYQCKHCSYKTTKTTNLTRHLTKHPESGCGVTPKQYPCNHCHAIFKRKTSLDDHIIRNHEDFVTSVSSKIHHCKHCSYKTTNITNLTRHLTTLHAEYWCSVTPEQYPCEHCHTIFTRKIHLDDHIVKNHEAVFTSVSSRIHQCKYCSYKTTMSSNFTRHLKNLHPESWRSIVSIQYPCIYCDATFTRKEHINDHVVRNHEELITPVSSENWHCIHCNATFKSKQSLDGHGEFITSVSSPIHQCKHCSYKTTKSTNLSRHLTNVHECSVTPNQYACNHCHAIFKVKESLDGHVLRNHEEFITSVSSKIHQCKHCNYKTTIMANFTRHLTNCHPESCCSVRSKQYPCDHCRAIFKSKAALDDHIIRNHEEFISSVSSKIHRCKHCTYKTSNITNLTHHSMKHLESG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260947;
90% Identity: iTF_00260947;
80% Identity: iTF_00260947;