Cmac005422.1
Basic Information
- Insect
- Callosobruchus maculatus
- Gene Symbol
- -
- Assembly
- GCA_900659725.1
- Location
- CAACVG010006787.1:210293-221342[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 1.7 1.5e+03 -0.6 2.0 16 35 37 57 29 64 0.67 2 10 0.11 94 3.3 4.5 13 41 137 162 131 167 0.83 3 10 1.5e-05 0.013 15.6 0.4 18 44 171 194 163 194 0.91 4 10 0.00018 0.16 12.1 2.0 13 44 201 229 196 229 0.88 5 10 1.6e-06 0.0014 18.7 0.2 18 44 238 261 231 261 0.90 6 10 0.0043 3.7 7.7 1.6 13 41 268 293 263 295 0.87 7 10 0.00012 0.1 12.7 0.2 18 44 306 329 293 329 0.90 8 10 0.00079 0.69 10.1 1.6 13 44 336 364 331 364 0.84 9 10 0.00028 0.24 11.5 0.2 17 44 373 397 368 397 0.89 10 10 7.2e-05 0.063 13.4 3.3 14 44 405 432 399 432 0.84
Sequence Information
- Coding Sequence
- atGAACAGCAAAAAAGGAGGAATTTTCGAGAGGGCGAAAATTCTCACGGAAAATGAAATACCGAGGAAAAATCAAGAAGTAGTAGCTGATAAGGAGACTGATGGAGACACATTCGTTTGCTATCACTGCGAATACGTCGCTAGAAGTAAACGACATTTGATTGATCACATGAAAGTGCATAGGAACaggaaatatatttacagctgtTGTTATTGCGATTTTCGAACAAATTCAGGAATATTATTTACCACCCACAATAAGACACATTCATCAGAGAGTAAGCAGTTCGAAGCGTTACATCTAAAAGAGGAAAATATGGATGGCAATTTTAGTCAAGGGAATGCCATGTTGATTGATTCAGAAACTAGTGTAGTAAGTAAAAGGTCCAGTAGAGCCAGAGAATCACTTAGTAGCAAAGTTCACCAGTGTACAAAGTGCAATTATAAAACTATCAATACTAAATATTTGAAGCGACATTTGGTAACACATTCTGATAATCGTATAATCAGTAGATGCTTATACTGTAATAAAACATTTACACGTAAAGAAACACTAGATGATCATATAGTAAGAAGTCATCCTGACTTTATAGCATCGGTCAGTAGAAAAGTCCACGAGTGTACgaagtgcacttataaaactacgaTTTCTTCAAATATCAGGCAACACTTAATTACGAATCATCCCGAGATAGCTGATAATGTAGTTAGTAGCTGTATTCactgtaataaaatattttcacgtaaACAAACACTAGACGATCACATAGTTAGaagacatcctgattttatagcatcggttaGCAGCAAAGTCCACGAGTGTAAGAAGTGTACTTATAAAACTGTTTACACCAGTGATTTGAAGCAACATATGGTAACACATTCTGATATAGACGATAATAATCATATAGATAGTAGATGCATCTACTGTGATACGACATTTACACGTAAAGAAACACTAGACGATCACATAGTTAGaagacatcctgattttatagtatcggttagcagcaaagtccacgagtgtacgaagtgcacttataaaactacgaAACCTTCAAATATCAGGCGACATTTAATTACGAATCATCCCGAAATAGCTGATAATCGCATTCTTAATAGATGTGTCTACTGTAATAAGACATTTAAATATAAACAAGGGCTGGATGAtcacataataaaaatacatccgGATTTTACAGCATCAGTTAGCAGCAAAGTCCACGAGTGTATgaagtgcacttataaaactacgaGTACTACAAGTATCAGGCGACATTTAAATACGAATCATCCCGAGATAGCTGGTAGTAGTTAG
- Protein Sequence
- MNSKKGGIFERAKILTENEIPRKNQEVVADKETDGDTFVCYHCEYVARSKRHLIDHMKVHRNRKYIYSCCYCDFRTNSGILFTTHNKTHSSESKQFEALHLKEENMDGNFSQGNAMLIDSETSVVSKRSSRARESLSSKVHQCTKCNYKTINTKYLKRHLVTHSDNRIISRCLYCNKTFTRKETLDDHIVRSHPDFIASVSRKVHECTKCTYKTTISSNIRQHLITNHPEIADNVVSSCIHCNKIFSRKQTLDDHIVRRHPDFIASVSSKVHECKKCTYKTVYTSDLKQHMVTHSDIDDNNHIDSRCIYCDTTFTRKETLDDHIVRRHPDFIVSVSSKVHECTKCTYKTTKPSNIRRHLITNHPEIADNRILNRCVYCNKTFKYKQGLDDHIIKIHPDFTASVSSKVHECMKCTYKTTSTTSIRRHLNTNHPEIAGSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00260923;
- 90% Identity
- iTF_00260923;
- 80% Identity
- iTF_00260923;