Cmac012525.1
Basic Information
- Insect
- Callosobruchus maculatus
- Gene Symbol
- bab1
- Assembly
- GCA_900659725.1
- Location
- CAACVG010009183.1:337845-489986[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4e-11 2.4e-08 33.6 0.0 1 39 525 564 525 568 0.90 2 4 8.5e-13 5.2e-10 39.0 0.1 1 39 579 617 579 620 0.95 3 4 2.3e-18 1.4e-15 56.8 0.0 1 45 634 679 634 679 0.98 4 4 3e-16 1.8e-13 50.0 0.0 1 39 686 725 686 729 0.93
Sequence Information
- Coding Sequence
- ATGACCTGTCAGCATTACTCCCTGCGATGGAACAATTACCAAAGAAACATGACCTCAGTATTCCACGAGCTTTTACAAACTGAAGCCTTTGTGGACGTTACGCTAGCATGTAATGACTTATCTTTAAAAGCTCACAAGGTGGTGCTATCAGCATGTTCGTCATACTTCCAAAAGCTGTTGATGGAGAACCCTTGCAAACACCCCACCATCATAATGCCTCAGGATGTCTGTTTTGGAGACCTTAAATTCATCATAGACTTTGTGTACAAAGGAGAAATAGACGTATCACAGGCACAGCTTGAGTCGCTGCTGCGAACGGCAGACCAATTAAGGATCAAAGGGCTGTGCGAATCGTCTGAGTATGAAGAAGGAAGTCTAGCAGCCACTGTCGAAGAGCGAAAGCCGGACTCTTCTAGGCAGAACACAGCTACTTCGGGACAGCCGGCAGCGAAACGATTCAAACCTACGGAGCAGTCGTCTCACCAGAAGCAGAAATACAACCAACTACAGCCAAAGCAGGAACAGCAGTACTATCACAGACCAACGTCGAATGCTCATTTGCACCCAGCAGCTGCAACTTCAGCTCAGGACCAACAACACAGGGACCGCCCAGGAGGAGCAGCTTCTTCTGTCGGGAACGAACAACACGAGCAGGCGTCGTCACCGCTCCAGCGAGAGCGAACaaccggcggcggcggcgtcggtgcagcggcggcggcggcagTACCGCGTCGGCCGGACGAAGAGGTCGAGACATCGGCGGGCGGGGGCGGCGAAGACCAGCACGACTCGCCGTTCGAAGGGGAGCTTCGGCCGCCATCAGCAGCAGCAGGGTCTGAAGAGGACGGCGATGACCGAGGGCGGCGCGACCGGGCCACGCAGCGGGAACCGCCGCCGTCGGGCGGCAGCGGCAAAACGCAGCGCCGCGCCTCTCGCTGGCTTCACCGGCCCCCTCAGCCAGTAACGGCGGATGAACGACCCGACCAACACCCGCCGCCAAACGCAAACACCGaccaagaagaagaaggagaaggtGGGGAAGAAGCGCGCCACCACAAGCCCGTCAACATGACCAGCCATGGAATCGTCACCGGCGGACAGACGATCTTCTCCCAGTTCGGCGTGGACACGGAGGACTTCCCACCGGAGCCCCCTGCTCCGTCCGCCATTCCCGTGGGACATGTGGACATGTCCGAGCACTCGCCCACTAGGACCCTGCTCACGACTCCTATCCATCGGACGGATATTTCAGATTCCACCAAGTATACCTTGGAAATCAAAAAAGAAGCAGACATAAAATTCGAAACTCTACGATCATACGACCAAGACAGCCTATTGGATATGGAATCCCACATGTCTGGCCCAGATCATTCAATGGACAGCCACGACGACATCGAAAGGGGTTTGCATCAGGGTATGTTGGTGCAACATGACTTTGGCGATATGATGGCAGGGGTTTCAGCAAATAGGTTAGATGCAAATGGCGATGAAGTACCtggtttaaaaaataatggCCATACAGAAAACATGCAGCATGTTGCAAGGTCACATGGTGGTGGGCCAAAGACATGGACGCAAGAGGATATGGAAATGGCTTTGGACGCTTTGAGGAACCACAATATGAGCCTTACCAAGGCATCAGCTACATATGGCATCCCTTCTACGACGCTTTGGCAAAGAGCGCACAGATTAGGAATAGATACACCCAAAAAGGAGGGACCTACGAAGTCGTGGACGGAAGAAAATCTGAATAGTGCTTTAGAAGCACTGAGGACAGGAACGATATCTGCGAATAAAGCTAGCAAAGCATATGGAATCCCCAGTAGCACCCTGTACAAAATAGCGCGAAGGGAGGGCATCCGCCTAGCGGCCCCCTTCAACGCTGCTCCCACCACGTGGACTCCCGAAGACCTGGAAAAGGCCCTCGAGTCTATCAGAACCGGCCAGACGTCAGTACAAAAAGCCTCTACAGAATTCGGCATTCCGACAGGCACACTTTATGGAAGGTGTAAACGGGAAGGAATCGAATTGTCTAGGTCTAATCCAACGCCTTGGTCGGAGGATGCCATGGGGGAAGCCTTGGAGGCAGTCAGACTGGGCCACATGTCGATCAACCAAGCTGCAATTCACTACAACCTTCCATACTCCTCACTATATGGTCGCTTCAAGAGAGGCATCAAGTATGAGGACAGCATGGAGATCAGCCAGGACAGCCAATCCCAGATGCCTGATCAGTTTGGCATCGAATACGTCACTACCTCCTCCCACCAGCAGATCCAGTACGGAAATCCAGGAAGCTGA
- Protein Sequence
- MTCQHYSLRWNNYQRNMTSVFHELLQTEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLMENPCKHPTIIMPQDVCFGDLKFIIDFVYKGEIDVSQAQLESLLRTADQLRIKGLCESSEYEEGSLAATVEERKPDSSRQNTATSGQPAAKRFKPTEQSSHQKQKYNQLQPKQEQQYYHRPTSNAHLHPAAATSAQDQQHRDRPGGAASSVGNEQHEQASSPLQRERTTGGGGVGAAAAAAVPRRPDEEVETSAGGGGEDQHDSPFEGELRPPSAAAGSEEDGDDRGRRDRATQREPPPSGGSGKTQRRASRWLHRPPQPVTADERPDQHPPPNANTDQEEEGEGGEEARHHKPVNMTSHGIVTGGQTIFSQFGVDTEDFPPEPPAPSAIPVGHVDMSEHSPTRTLLTTPIHRTDISDSTKYTLEIKKEADIKFETLRSYDQDSLLDMESHMSGPDHSMDSHDDIERGLHQGMLVQHDFGDMMAGVSANRLDANGDEVPGLKNNGHTENMQHVARSHGGGPKTWTQEDMEMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYEDSMEISQDSQSQMPDQFGIEYVTTSSHQQIQYGNPGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00248853;
- 90% Identity
- iTF_00260775;
- 80% Identity
- iTF_00260775;