Bsil004591.1
Basic Information
- Insect
- Bruchidius siliquastri
- Gene Symbol
- -
- Assembly
- GCA_949316355.1
- Location
- OX438531.1:745675-758169[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.1e-11 1.9e-08 34.0 0.0 1 39 443 482 443 486 0.90 2 4 7.7e-13 4.7e-10 39.2 0.1 1 39 497 535 497 538 0.95 3 4 2.1e-18 1.3e-15 57.0 0.0 1 45 552 597 552 597 0.98 4 4 2.7e-16 1.6e-13 50.2 0.0 1 39 604 643 604 647 0.93
Sequence Information
- Coding Sequence
- ATGGATGATTTCCCGTCGCGACGGGAGAAGAAATGCGGTTCGAAAAATCCTCCGGCCCCGGAGTCCGGACTGGCTGGCGTTTCGTCACTGCTGCGGACGGCAGACCAATTAAGGATCAAAGGACTGTGCGAATCCTCAGAATACGAAGAAGAGAGTCTAGCAGCCACCGTCGAGGAACGAACACCTGAGTCATCGCCATCGCTGCCATATTCTAGGCAGAACCCTGCTGCTGGAGGGCAGCCAGCAATCAAACGATTCAAGTCTTCCGGTTCGCCGCCTAATAGTAAACAGAAATACAATCAGCAACAGACAAAGCAAGAACACCAATACCACCACCGAGCAACGTCGAATGAGCGGACGAACACAGCAGCTGCAACTACAGCACAGCATCTTCAACAAAAGGAACGTCCAAGAACAGCTTCTGTTGGGGCCGAACAGCACGAGGCGTCTGCCGCGGAACCAGCGCACCAGCGAGAGCGAACCAACACCGCCTTCGGTgcagcggcggcggcggcggcggcagtACCGCTGCGCGACGAAGAGCTCTTGGCTTCGGAAGGGGGCGAGGGGCAAGCAGCACCGCACGACTCGAGGTTCGAAGGAGAGCTTGAAGAGCCAGACGAGGAGGAGGAGGACGGCGATGACCGAGGGCGGCGCGACCGAGCAACGCAGCGGGAACCAAACGGCGTCAGGGCGCTGGGACGCGGTTCGCGTCGGGCCCCGCAGCCAGTAACCGCGGATGAACGACCCGACGAACACTCGCCAAAAGAAACCACCGACGAAGAAGGAGAAGGTGGGGAAACGCGCCACAAGCTCGTCAACATGACCAGCCATGGAATCGTCACCGGCGGACAGACGATCTTCTCCCAGTTCGGTGTCGACACGGAGGACTTCCCGCCAGAGCCGCCTGCGCCGTCCGCAATTCCCGTGGGGCACGTCGACATGTCCGAACACTCGCCCACCAGGACCTTGCTCGCTGCCCCCATCCATAGGACCGATATCTCCGATTCTACCAAGTATACTTTGGAGATAAAAAAAGAAGCAGACATCAAATTTGAAACGCTGCGGTCATACGATCAGGACAGCCTATTGGATATGGAATCCCATATGTCAGGGCCGGATCATTCAATGGACAGTCACGACGACATCGAGAGGGGTTTGCACCAGGGTATGCTGGTGCATCACGACTTCGGTGATATGATGGCAGGGGTTTCGGCAAATAGGTTAGATGCAAATGGCGAAGAAGTACctggtttaaaaaataatggcCATTCGGAAAACATGCAGCATGTGGCTAGGTCGCACGGCGGTGGCCCAAAGACGTGGACGCAAGATGATATGGAAATGGCATTAGACGCTCTGAGAAACCACAATATGAGTCTTACTAAGGCTTCAGCCACGTATGGCATCCCGTCCACGACGCTTTGGCAAAGAGCACACAGATTAGGAATCGATACTCCTAAAAAGGAAGGACCTACGAAGTCATGGACAGAAGAAAACCTTAATAGTGCTTTAGAAGCACTGAGAACAGGCACGATATCTGCAAATAAAGCTAGCAAAGCATACGGAATTCCCAGTAGCACCCTGTACAAAATAGCGCGAAGGGAGGGTATCCGCCTAGCGGCGCCATTCAACGCTGCACCCACCACGTGGACTCCTGAAGACCTCGAGAAGGCCCTCGAGTCAATCAGAACCGGCCAGACGTCAGTACAAAAAGCCTCCACCGAATTCGGCATTCCGACGGGCACGTTGTACGGAAGGTGTAAGAGGGAGGGGATCGAACTGTCGAGGTCCAATCCGACGCCTTGGTCGGAGGATGCTATGGGAGAGGCCCTGGAGGCTGTTAGACTGGGTCACATGTCGATCAACCAAGCGGCGATCCACTACAATCTGCCATATTCCTCGCTGTACGGACGCTTCAAGCGAGGAATCAAGTACGAGGACAACATGGAGATCAGTCAGGATAGCCAATCGCAGATGCCGGATCAGTTCGGCATCGAATACGTCACTACCTCCTCCCATCAGCAGATACAGTACGGAAATCAAGGAAGCTGA
- Protein Sequence
- MDDFPSRREKKCGSKNPPAPESGLAGVSSLLRTADQLRIKGLCESSEYEEESLAATVEERTPESSPSLPYSRQNPAAGGQPAIKRFKSSGSPPNSKQKYNQQQTKQEHQYHHRATSNERTNTAAATTAQHLQQKERPRTASVGAEQHEASAAEPAHQRERTNTAFGAAAAAAAAVPLRDEELLASEGGEGQAAPHDSRFEGELEEPDEEEEDGDDRGRRDRATQREPNGVRALGRGSRRAPQPVTADERPDEHSPKETTDEEGEGGETRHKLVNMTSHGIVTGGQTIFSQFGVDTEDFPPEPPAPSAIPVGHVDMSEHSPTRTLLAAPIHRTDISDSTKYTLEIKKEADIKFETLRSYDQDSLLDMESHMSGPDHSMDSHDDIERGLHQGMLVHHDFGDMMAGVSANRLDANGEEVPGLKNNGHSENMQHVARSHGGGPKTWTQDDMEMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYEDNMEISQDSQSQMPDQFGIEYVTTSSHQQIQYGNQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00260527; iTF_00260775;
- 90% Identity
- -
- 80% Identity
- -