Cmac009117.1
Basic Information
- Insect
- Callosobruchus maculatus
- Gene Symbol
- Rel
- Assembly
- GCA_900659725.1
- Location
- CAACVG010007839.1:5620-37976[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-37 3.3e-33 115.2 0.1 1 168 99 294 99 295 0.87 2 2 0.51 4.9e+03 -2.6 0.0 30 66 536 572 533 585 0.78
Sequence Information
- Coding Sequence
- atgatGACAGACATTACTACCACATACACTACCTTAGATAACATGAGCATGAATAAAGAATATGCTATGTTACCGACACCTCCAATGAGTGGAGGTGAATCTCCACAGGGGACCAACCAGGTACCATCTCCATCATCCTCTGATTCAAATAAATCAGTATACACTGTATATCCATCAGGTCAGTATACTGAGGATGGATTTATTATTTCAATACCTACCATGACAGAAGGTGAGGGACTGGTGAACCCAACAGATGTCATCATGGGTGATGACACATGTGTAACAAaaccatcactaaagctactagTGCAACCAACTGATAAATTCAGGTTTAGATATATATCAGAAATGGCTGGCACACATGGCAGTTTAACAGGAGTGAAGTCTGATAAAAGTAGAAACAGTACGCATCCTACAGTGCAGTTGCTGAATTGTTCAGAACCTGCTATAGTCAGATGCTCCATATATCAAGTCAGGGAGAAAGGTAAACATCTTAAACCTCACCCCTACCCTCACCCTCATAGACTTATAATGAAAAGGGGCAAAGAAGAACAGGATGATCCACATGACATTGAAGTTGGACCTGCTGAAAAGTTCACAGCAGTCTTCCCTGGAATGGGTATTATACATAcggcgaaaaaaaatattgttggaGAATTGGTgagaaaaaagtctaaaatttgGAAAGAGACTATTGCTTACAATGAAGGCAAGCAAAGAGATCTCAGtagtaaagaagaagaagagATTAAGCGATTGGCCGAAGCGGAGAGCAAATCTATTAATCTGAATATAGTGTGTCTTAGGTTTGATGCGTTTGTAAAACGCAACGGGATATTGTTTCCCATTTGTGATCCTATATATTCACAAGGAATAAATAACCTGAAGAGCGCAGAAACTGGCGATTTGAAGATTGTCAGATTAGATAAAATCGTTAGTCCCGCTAAAGGAGGAGAGgaagtttttatatttgtcGAGCGTGTAAAAAAGAATAACATCGAGATAAGATTTATTGAAACCGACGATTATGGGAACACAATCTGGCAAGGAGAGGGAAAGTTTACTTCCCTTGATGTCCATCATCAGTATGCAATTGCTTTTAGAACCCCCCCGTATAGGAATCAGGACATTAAGGAGGCGGTACATGTTTCCTTGGAGCTGTTTCGACCCAGCGACGGAGCCCGATCGGAGCCCCGCGAGTTCCGGTTCATCCCGAATAGGCCGGGGCCGGGTAGCAAGAGATGTCGCTACGACTACTATTCGGGCTCCTCCAGCTGTGAGAGCGACAACATTCCCGACATGATCAGAGAATCTACGTGCCAACCACTTCAATCGGCTGCCCAGATTTCACCAACTTGGAGTGACCAGTTAAGCGCAGAGATGAAAAAAGCCATGCAAGATGTTCATTCTGACGAATTCGAGAAATTCTTGGCTTCTTTGGATCCGGACAGTTTGAGTCTGTTCTATGAGGGGGAACCATCCTTACACGGTATCGACGGTAATTTTCCACGTGTCCAAGGCCCTTCGGACGATTTTGGCGCTATCAAACCACCTGCTCCTGGTATTAAGATTGAGGTCAGCTACGAGGATAAAAGAATGGCGGAGAACGTTTTAAGGGAGATGCGGAGCTTCTCTAAGGTAAAGCACAATCGAGAAGATGAAAAGAGCATGATTAATGTCAATTTCGGCAAGAACAACCTTACGAATGCTTTACACGTACTGATCTGTCAGAACAAGCTGACCGAAGCCCGCACCatgataaaacttatatactgcTATAACGATGGTAACATGATGGACGTGAAGAACAGCTCTGGTCAGACCTACCTTCATTTGGCGGTACTCAGCCAGAACGAAATGATCGTCAAGCACCTGTTGCGCGCCAAGGCAAAGGTCGGCGTAGTCAACGATGAGCTTCAGACACCTCTGCATCTCGCTGTGAAGATATTTGCACCTTTGGGTATCTTAGAGGCGTTGCTACAAGATAGACCATATGAACGCGTCAAACAGTACGTCGATCTGACGGATGGAGGTAAGTTTCACGAGATCGAC
- Protein Sequence
- MMTDITTTYTTLDNMSMNKEYAMLPTPPMSGGESPQGTNQVPSPSSSDSNKSVYTVYPSGQYTEDGFIISIPTMTEGEGLVNPTDVIMGDDTCVTKPSLKLLVQPTDKFRFRYISEMAGTHGSLTGVKSDKSRNSTHPTVQLLNCSEPAIVRCSIYQVREKGKHLKPHPYPHPHRLIMKRGKEEQDDPHDIEVGPAEKFTAVFPGMGIIHTAKKNIVGELVRKKSKIWKETIAYNEGKQRDLSSKEEEEIKRLAEAESKSINLNIVCLRFDAFVKRNGILFPICDPIYSQGINNLKSAETGDLKIVRLDKIVSPAKGGEEVFIFVERVKKNNIEIRFIETDDYGNTIWQGEGKFTSLDVHHQYAIAFRTPPYRNQDIKEAVHVSLELFRPSDGARSEPREFRFIPNRPGPGSKRCRYDYYSGSSSCESDNIPDMIRESTCQPLQSAAQISPTWSDQLSAEMKKAMQDVHSDEFEKFLASLDPDSLSLFYEGEPSLHGIDGNFPRVQGPSDDFGAIKPPAPGIKIEVSYEDKRMAENVLREMRSFSKVKHNREDEKSMINVNFGKNNLTNALHVLICQNKLTEARTMIKLIYCYNDGNMMDVKNSSGQTYLHLAVLSQNEMIVKHLLRAKAKVGVVNDELQTPLHLAVKIFAPLGILEALLQDRPYERVKQYVDLTDGGKFHEID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -