Basic Information

Insect: Calliphora vomitoria
Gene Symbol: L_1
Assembly: GCA_942486075.2
Location: CALNXM020000178.1:1396040-1410003[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 9.3e-06 0.00046 20.7 1.7 1 23 219 241 219 241 0.98

2 19 0.74 36 5.3 5.7 1 23 247 269 247 269 0.98

3 19 4e-07 2e-05 25.0 3.1 1 23 275 297 275 297 0.99

4 19 1.9e-05 0.00092 19.8 0.3 1 23 303 325 303 325 0.98

5 19 4.6 2.3e+02 2.8 0.8 2 23 390 413 389 413 0.85

6 19 0.0037 0.18 12.5 0.2 2 23 440 462 439 462 0.96

7 19 0.049 2.4 9.0 0.7 1 23 563 585 563 585 0.97

8 19 0.54 26 5.7 2.0 2 23 593 614 592 614 0.95

9 19 0.0023 0.11 13.2 1.1 1 23 622 645 622 646 0.94

10 19 0.38 19 6.2 0.1 1 19 651 669 651 671 0.93

11 19 0.95 46 5.0 0.5 3 23 683 704 681 704 0.85

12 19 0.0024 0.12 13.1 2.9 1 23 743 765 743 766 0.96

13 19 5.3 2.6e+02 2.6 0.9 1 23 935 959 935 959 0.89

14 19 0.0014 0.069 13.8 4.8 2 23 968 990 967 990 0.97

15 19 0.21 10 7.0 0.1 1 23 996 1018 996 1018 0.92

16 19 0.041 2 9.2 0.5 2 23 1026 1047 1026 1047 0.96

17 19 1.3 65 4.5 0.5 2 23 1137 1158 1137 1158 0.94

18 19 0.0029 0.14 12.8 0.0 1 23 1168 1190 1168 1190 0.97

19 19 0.058 2.9 8.8 0.8 1 23 1197 1219 1197 1219 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	9.3e-06	0.00046	20.7	1.7	1	23	219	241	219	241	0.98
2	19	0.74	36	5.3	5.7	1	23	247	269	247	269	0.98
3	19	4e-07	2e-05	25.0	3.1	1	23	275	297	275	297	0.99
4	19	1.9e-05	0.00092	19.8	0.3	1	23	303	325	303	325	0.98
5	19	4.6	2.3e+02	2.8	0.8	2	23	390	413	389	413	0.85
6	19	0.0037	0.18	12.5	0.2	2	23	440	462	439	462	0.96
7	19	0.049	2.4	9.0	0.7	1	23	563	585	563	585	0.97
8	19	0.54	26	5.7	2.0	2	23	593	614	592	614	0.95
9	19	0.0023	0.11	13.2	1.1	1	23	622	645	622	646	0.94
10	19	0.38	19	6.2	0.1	1	19	651	669	651	671	0.93
11	19	0.95	46	5.0	0.5	3	23	683	704	681	704	0.85
12	19	0.0024	0.12	13.1	2.9	1	23	743	765	743	766	0.96
13	19	5.3	2.6e+02	2.6	0.9	1	23	935	959	935	959	0.89
14	19	0.0014	0.069	13.8	4.8	2	23	968	990	967	990	0.97
15	19	0.21	10	7.0	0.1	1	23	996	1018	996	1018	0.92
16	19	0.041	2	9.2	0.5	2	23	1026	1047	1026	1047	0.96
17	19	1.3	65	4.5	0.5	2	23	1137	1158	1137	1158	0.94
18	19	0.0029	0.14	12.8	0.0	1	23	1168	1190	1168	1190	0.97
19	19	0.058	2.9	8.8	0.8	1	23	1197	1219	1197	1219	0.95

Sequence Information

Coding Sequence: ATGTACTCGACACATACATCGTCAAGTTATTCACCTTCGATATCAGATGGTACTATCACACCAAATTCTTTACATCATCATCATCACCACCATCAGCATTTAGTTGTGCCACCACATTTGCCACCATTCCCAAATTCTGCGACTTATGAAGAAGACACAGCATCTTTGGCCCTACAGACACAACGTCTGCAAAGACAAAAAACCAATGGCACTTTGGATGGCGCTGACTATGAAGACAATGCCAATGACAATGACAACGAAAGGATTCACAAAAATGATACAAAATTGTGCGAAGACAACAACGACACAATTGTTGCAGACAATAAGACAACCGCAAATATTCACGAAAGTGGCGATGAACAACATCATCATCATCAACAGCATCAGCACCATCAACTTAAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATTCCTTCAAAATTACGTAAAATCGATAGGGATTCAACGGTTGGTAATGGTGCCAATAGCGTCGGTGTTAACACTACTACTACTGCTGCTGCTGGTGCTGCTACTGGTAGTGTTGGTGGTGATGGTGTAACAACAAATGCAGTCAAGTTTGATAAGTTGACAGGAGATGGCATTAAAAGTGGTAACAATGCTGCTAGTGCCGACGGATCCTATCAATGTCAATTCTGTGATAAATCATTTCCGCGTCTTGGTTATTTGAAAAAACATGAACAGAGTCATGCTGAACACTTGCCTTTTAAATGTGAATATTGTGCTCGTCTCTTTAAGCACAAGCGTTCTCGTGATCGTCATACTAAATTACATACAGGCGATCGTCGCTATCGTTGTCCTCATTGTGAGGCGGCTTTTTCAAGAAGCGATCATTTAAAGATTCATATGAAAACCCATGATAACCAAAAACCATTCCAATGTACCATTTGCAATCGAGGCTACAATACAGCTGCCGCTCTTACATCTCATATGCAAAATCACAAAAAACAAGCAGCTCTTTTAGCTGCTGGAGGCAATCCTCAAGCCCTGAATTATAGTCCACGTTCTACTGGATCGGCTTCTAGTAATGGCAGTTTACAGAAAAGACGTTACGGTTTGGCTGGAGCACCCGAACAGAGCCCAAATCGCCTGGATTACCCTAAACGTGGTCGTTCTTCATCATCGAATATGCTAAAGTGCACATTTTGTTCAAAGTCCGATTTCACTGCAGTGGAACAATTAAATAATCATCTACAAACTCAACATGAAAAAGAATTGGCCCACTCTATGACACCTCCTTCCACTAATAACAGTCAACCGATGGATAATCATACTTTCCAGCTGTCGTGTGAATACTGCACCATGAAGTTCCCCAACATTGCTGCCATGTTTCAGCATATGCGCTCTGCTCACTTAGATCGTTTGACCAGTCCTAATTCATACTTTGAACATTTTAATCGTCTAGCTGCGTCAGGTACTTTCAGTCCACGTTTGTTAACGGGACCTCCTCTAAGGAGTGCGGCCAGTGCAGAGGAGAACAGCATTAAAGAGGAACAAAATTTGTCAAGTCCTAAATCAGCAGAAGCGATAACACGTCAAAGTGAAGATGAACCAACAGATCTAAGCCAAAATAATCGTAGATCGATGACACCTACAAATACCCCACAAAATTCCCCCCAAGAAAGTTTTCCCCCCACAGAAAAGCCGGGTTTATTCTTTTGCAACCAATGCAATGCTGGTTTGCCCGATTTTGAGTCATTCCGCAATCATTTGAAGACCCATATTGCCCAGGGCCTCAATTTAGTGTGTCACCATTGTGGTCTGCTCTTAAGAGAACATGCAGAGTATGAAAGACATGTTATATCCCACTTTCTAATAACAAATTCTGAGTATAATTGTTCTGGAAACTGCCAAAAGAACTTTGGAAAACCGGAGGAATTACAAAAACATCTGTTGGATCATCATGCCATAACAATGTTTAAATGTGGTCTTTGCAGTGAAATGTTTGAATCGAAAGTGGCCATACAAGTACATTTTGCTTGTACACACTCCGCCGAAACCAAAATCCTCAGATGCTCCGCCTGTATGGATGTCTTTAGGACGGAGAGTGATTTTAACATACATGTCAAGACACGTCATCAAGCTGTAAATAATACTCCTGCTCCGGTAAATTCTTTGCAGTGTATGTTTTGTCGTACGGTATGTTCCTCTGACTTGGAAATGCAATTTCATTTGGCAGCCCATGCTAGACAATTCCGTTGTCCCTCCTGCCCCGAAACTTTCCATGTTGAATTTTTACTCGATCGCCATATGCAAACACATCATGGTGGCTTGGAACGACCACCACCTCCGGCGCCACCACAAACTGTGGCTGAAGAGCACACATCACCGGTTTCCAATCCAAATGCTATATCTCCAATGAACTCTTTGTATGTGAATGCTCTTTTCGGAAAGTCTCCATTAATGCCGCTGGCTCCACAAAATAATAACAACAGTATCTTGGATTACAACATGGCATTTGCCTCCCATCTCAATAAGGGTCTATTTCCCAATACCACGCCAAACAAATTTTATAATCCTTTGCAAATTGATACGAATGCCATGAAACACTCTGCTCTAATGTACGGTTTGTCCCAGAGATATTTCGATACTAATCGCACAGTCATGGAAATGTATCAACAACAACAACAGCAGCAGCAACAACAACATCATCAGGAAAATAATAAAACACCTGGAAATTATTTCATTAGTCCCAAACAGCCAACAGCAGGAGCTCATGACAGCATCCATCGAACTGATTTGCCAGTTTCCCCAATAAATAACACTGGCTTCAGTTGTGGCATTTGCGAGCGAAATGATTTTCGTACAGAGTCCGAAGTTCATTCACATCGCAAGATTGTTCACAATCTTAAAACGGGGGTTAGTTTGAAGTGTGCCTACTGTTCGGGCAACTTTAAGTCCAGGAGCGAGTTGGAACATCATATGAAAACATGCCACAATTCTACCGGCAAACACAAGTGTTTGATATGTGATGAAATATTTCCGTCGCCAGCCATTTTGGCCGAACACAAATTGCAACACTCCAAGGTGGGTCAATCCGGAAGATGCTCGCACTGTTCTAAGGCGTTAGCTGATGTCAGTGCTTACAAGGCTCATTTGTCCGAGCACAATACAGAAGGTCAAATGCCAGTGCAGTGTATATGCTGTCGCCAGTCTTTACATTCGGAATTCGAGATCGGTCTGCATGCAAAATTCCATGTTAAAAACTCAAGTGTTCAGGAAAACGTTTGTGCTCTTTGCTTGGAACCCATTACCAATGCACCCACTGAAGCCAAGGTATGTGAGAAATGCTGTCGCAAGCATAATCTCAATGCAAAGTTCAAGCAACGCGAACACTTTGAACGACCCGCCGAATTAAGGCAATTTATTGAAAATCGTTGTAATCTTTGCAAAATGATATTACCACACGCCCAAAAACTTCAAGAACACTTGGTTGAGCACACCTTTGCTGGTTGCGAGGATCGTGGCTTTAACTGTTACATCTGTTCGGCGGTCTTTACTGCTCCTAGTGGTCTACTTAATCATATGCTCGAGCATGGTATCAACTCAAAGCCTTACGATTGCAATTTATGTCCCGAAAAATACTACTTCCGTGCTGAGTTAGATCACCATCAAATCGATCATGATTTGCGAAAATCTCCAGCAGCAGTTAAAAATGAACAAGAACAATCGACCAATAAAGAAGTTGCTTCAAATAATATGAAATCGGAGAAGTCCGTCGAAAGGTTGAATGAAGTGAAACAGGAAGTAATTGAAACTGATCTTAATTCCAATGTTGCCGATGAAGACGAGTACATTGAGGTGGAAAAGGTAAATGAGCATAACAACAACAATAACCATCAGTTGGATGATAAAGTGTCGAATAAAACAGAAGATGCTATAGAGAAGTCTAGTGAGCGTGTCAGAGATGAAAATACATAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLHHHHHHHQHLVVPPHLPPFPNSATYEEDTASLALQTQRLQRQKTNGTLDGADYEDNANDNDNERIHKNDTKLCEDNNDTIVADNKTTANIHESGDEQHHHHQQHQHHQLKRHGRHHRYAEHALRIPSKLRKIDRDSTVGNGANSVGVNTTTTAAAGAATGSVGGDGVTTNAVKFDKLTGDGIKSGNNAASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQALNYSPRSTGSASSNGSLQKRRYGLAGAPEQSPNRLDYPKRGRSSSSNMLKCTFCSKSDFTAVEQLNNHLQTQHEKELAHSMTPPSTNNSQPMDNHTFQLSCEYCTMKFPNIAAMFQHMRSAHLDRLTSPNSYFEHFNRLAASGTFSPRLLTGPPLRSAASAEENSIKEEQNLSSPKSAEAITRQSEDEPTDLSQNNRRSMTPTNTPQNSPQESFPPTEKPGLFFCNQCNAGLPDFESFRNHLKTHIAQGLNLVCHHCGLLLREHAEYERHVISHFLITNSEYNCSGNCQKNFGKPEELQKHLLDHHAITMFKCGLCSEMFESKVAIQVHFACTHSAETKILRCSACMDVFRTESDFNIHVKTRHQAVNNTPAPVNSLQCMFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGGLERPPPPAPPQTVAEEHTSPVSNPNAISPMNSLYVNALFGKSPLMPLAPQNNNNSILDYNMAFASHLNKGLFPNTTPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQQQQQQQHHQENNKTPGNYFISPKQPTAGAHDSIHRTDLPVSPINNTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKALADVSAYKAHLSEHNTEGQMPVQCICCRQSLHSEFEIGLHAKFHVKNSSVQENVCALCLEPITNAPTEAKVCEKCCRKHNLNAKFKQREHFERPAELRQFIENRCNLCKMILPHAQKLQEHLVEHTFAGCEDRGFNCYICSAVFTAPSGLLNHMLEHGINSKPYDCNLCPEKYYFRAELDHHQIDHDLRKSPAAVKNEQEQSTNKEVASNNMKSEKSVERLNEVKQEVIETDLNSNVADEDEYIEVEKVNEHNNNNNHQLDDKVSNKTEDAIEKSSERVRDENT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: iTF_00045671;
80% Identity: -