Basic Information

Insect: Calliphora vomitoria
Gene Symbol: grau
Assembly: GCA_942486075.2
Location: CALNXM020000327.1:93931-101202[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.072 3.6 8.5 0.2 2 23 197 219 196 219 0.94

2 10 0.044 2.2 9.1 0.5 6 23 229 246 229 246 0.99

3 10 0.012 0.58 10.9 3.7 1 23 252 275 252 275 0.94

4 10 0.0004 0.02 15.6 2.3 1 23 283 306 283 306 0.91

5 10 3.8e-05 0.0018 18.8 0.6 2 21 312 331 312 332 0.95

6 10 0.12 6 7.7 0.8 2 23 340 361 339 361 0.95

7 10 0.0019 0.091 13.5 0.9 2 23 370 391 369 391 0.97

8 10 0.0083 0.41 11.4 0.6 1 23 398 421 398 421 0.96

9 10 7.7e-06 0.00038 21.0 2.3 1 23 427 449 427 449 0.98

10 10 2.8e-05 0.0014 19.2 4.4 1 23 455 478 455 478 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.072	3.6	8.5	0.2	2	23	197	219	196	219	0.94
2	10	0.044	2.2	9.1	0.5	6	23	229	246	229	246	0.99
3	10	0.012	0.58	10.9	3.7	1	23	252	275	252	275	0.94
4	10	0.0004	0.02	15.6	2.3	1	23	283	306	283	306	0.91
5	10	3.8e-05	0.0018	18.8	0.6	2	21	312	331	312	332	0.95
6	10	0.12	6	7.7	0.8	2	23	340	361	339	361	0.95
7	10	0.0019	0.091	13.5	0.9	2	23	370	391	369	391	0.97
8	10	0.0083	0.41	11.4	0.6	1	23	398	421	398	421	0.96
9	10	7.7e-06	0.00038	21.0	2.3	1	23	427	449	427	449	0.98
10	10	2.8e-05	0.0014	19.2	4.4	1	23	455	478	455	478	0.97

Sequence Information

Coding Sequence: ATGGTACATACAGCTTACAGAGTATTGCAAGATGGCTTTACAGCGAAAGGTGAAAATATTACCCACTGTGATTCTTCTACAAATGAATTTGAAGAATATTGTTCTGTACCCTACAAATGTGAAACTTATGATAGCATTTCCGAAATGGGAGAATTGCCATTTCAAATGCCATCCAAGGAACTCGAAGAAACTTATATAAAAAACAATAAAATAGCACCTCGGGATGTTTTATCTGATAATTCTATTTGCGACGATAACCATCTGGATACGAATACATCTTGCAATGAAATTATTGTAGCTATTGGGAAAAAAGAAAATACTAACAATATTTCTAGGGACATTAATGAATCTGAGTCATCTATTGAAAAGAAAATTTCACATAAGTCGAGTAAGCTCAAATATGTTCTATCTAACTCGGTAAATAAAAATACAATTGCAAGCAACGCCAAAGGTTCAATCGGAAAAAAGAGAGGTCGTCCAAAAAAAGAGAAAGACCTAATGAAGCCAAGAAAGAATACAGATGAACAAGAAACATACAAAGCTAAGATAAAAGAGTATGATGCTGAAATTGCAAAGTACATGTCATTGTATTGCGATATTTGCAATAGTAAATCCGAAAATTTTCCTGCATTAAGAGTTCACATGCGCGATACTCATAATATTAAAGAGGGATATGTGACTTGCTGCGAAAAAAAGTTTAATAAAAGAGCACTTCTCTTGTATCACATACGGCAACATTTAAATCCCAGTTGTTATCGATGCGAAGAATGCGATTTTACATTTTCCGATCGTCAATCTAGACATAATCATTTCTTGGTTAAACATCAAAAAGATGAAGATAAAATTTACGCATGTTCTCAGTGCTCGAAAAAATTTGTAAGGAAATATCTTCTGGAGCAGCATAAATCATTTTCACATCGAGATTTTATACCCAAGTGCAAAAATTGTGGCAAAAGATTTAAAACTGTGGAAGAGTTGACTGAACATATTAATAAAGAAGACTGTCAACCTGGGACAATGTGTGATATTTGTGCAAAATGTATTCGGGGAACCGCTGCTTTCAAACGACACCAACTTGAGCATCAGGGAGTTGCGGTACCAAAAGTACAATGTGATTTATGCGGCTTATGGTATAAAGATAAAAGAGGGTTAAAGAGACACAAAAGAAAACATATTGAAGCAAAGGAACCTCATGTTTGTGACATATGCCAAAAAATATCTCCCAGTCGCAGTGCGATGTTGAGTCACAAGCGTTATGCACACGGGACAGATCGTATACATGAATGTAGTGTCTGTCAAAAGACATTTAAGAAGCCAATATCATTGAGAGAGCACATGACAACACATACTGGAGAAGTTCTCTATAATTGTCCACACTGTCCTAAAACGTTCAATTCTAATGCAAATATGCATTCTCATCGCAAAAAAGTGCACCCCAAAGAATTTGAAGAAACTCGTAAACAACGCAAACAAAATGTCTCTCTTGGGAACAGTAAGTATTTTAAATATCCGAATTAA
Protein Sequence: MVHTAYRVLQDGFTAKGENITHCDSSTNEFEEYCSVPYKCETYDSISEMGELPFQMPSKELEETYIKNNKIAPRDVLSDNSICDDNHLDTNTSCNEIIVAIGKKENTNNISRDINESESSIEKKISHKSSKLKYVLSNSVNKNTIASNAKGSIGKKRGRPKKEKDLMKPRKNTDEQETYKAKIKEYDAEIAKYMSLYCDICNSKSENFPALRVHMRDTHNIKEGYVTCCEKKFNKRALLLYHIRQHLNPSCYRCEECDFTFSDRQSRHNHFLVKHQKDEDKIYACSQCSKKFVRKYLLEQHKSFSHRDFIPKCKNCGKRFKTVEELTEHINKEDCQPGTMCDICAKCIRGTAAFKRHQLEHQGVAVPKVQCDLCGLWYKDKRGLKRHKRKHIEAKEPHVCDICQKISPSRSAMLSHKRYAHGTDRIHECSVCQKTFKKPISLREHMTTHTGEVLYNCPHCPKTFNSNANMHSHRKKVHPKEFEETRKQRKQNVSLGNSKYFKYPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045608;
90% Identity: iTF_00259203;
80% Identity: -