Basic Information

Insect: Calliphora vomitoria
Gene Symbol: -
Assembly: GCA_942486075.2
Location: CALNXM020000172.1:258004-264554[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.6 29 5.6 0.8 1 23 282 305 282 305 0.93

2 13 0.019 0.92 10.3 1.2 2 23 384 406 383 406 0.95

3 13 2.7e-06 0.00013 22.4 1.8 2 23 1023 1044 1022 1044 0.97

4 13 0.00029 0.014 16.0 2.3 1 23 1050 1072 1050 1072 0.97

5 13 7.9e-07 3.9e-05 24.1 3.4 1 23 1080 1102 1080 1102 0.99

6 13 0.02 1 10.2 0.1 1 23 1108 1131 1108 1131 0.97

7 13 0.0058 0.29 11.9 2.9 1 23 1302 1324 1302 1324 0.98

8 13 0.042 2 9.2 0.8 3 23 1332 1352 1330 1352 0.97

9 13 0.00096 0.047 14.4 5.9 1 23 1358 1380 1358 1380 0.98

10 13 4.6e-07 2.3e-05 24.8 0.2 1 23 1386 1408 1386 1408 0.99

11 13 0.0017 0.083 13.6 7.5 1 23 1414 1436 1414 1436 0.98

12 13 0.0005 0.025 15.3 3.8 1 23 1444 1466 1444 1466 0.99

13 13 0.00015 0.0071 17.0 0.5 1 23 1472 1495 1472 1495 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.6	29	5.6	0.8	1	23	282	305	282	305	0.93
2	13	0.019	0.92	10.3	1.2	2	23	384	406	383	406	0.95
3	13	2.7e-06	0.00013	22.4	1.8	2	23	1023	1044	1022	1044	0.97
4	13	0.00029	0.014	16.0	2.3	1	23	1050	1072	1050	1072	0.97
5	13	7.9e-07	3.9e-05	24.1	3.4	1	23	1080	1102	1080	1102	0.99
6	13	0.02	1	10.2	0.1	1	23	1108	1131	1108	1131	0.97
7	13	0.0058	0.29	11.9	2.9	1	23	1302	1324	1302	1324	0.98
8	13	0.042	2	9.2	0.8	3	23	1332	1352	1330	1352	0.97
9	13	0.00096	0.047	14.4	5.9	1	23	1358	1380	1358	1380	0.98
10	13	4.6e-07	2.3e-05	24.8	0.2	1	23	1386	1408	1386	1408	0.99
11	13	0.0017	0.083	13.6	7.5	1	23	1414	1436	1414	1436	0.98
12	13	0.0005	0.025	15.3	3.8	1	23	1444	1466	1444	1466	0.99
13	13	0.00015	0.0071	17.0	0.5	1	23	1472	1495	1472	1495	0.97

Sequence Information

Coding Sequence: ATGATCAACACTTTGCTGGAGCATGTGCCCATCAAAATGGAAGTCAAAGACATTGATGAAGAGGCCACAGATAATGCAGCAAATGAGGAAACTGGCTTAGAAATGGCTAATGATGATGAGGAAATTGATGAGACCGATGAAGAGCTAGATGAGGAAGACGAAGAAGATGAGGAGGAAGAGGATGAAGAAGAGTCTGAAACAGAAACTGATGCCTTAGAAATTGAACAAGAGGCTACCATGCTAATAAGCAGTGATGAAGAAGCCGAACTGGAGGCACAAAGGATACGTTTTCCCGATAAAATGGCGGTCAAAAAATTGCGCCGTGACTCCCTTAAATCTTCACGCAGCTCCTCCAGGAATAGCCAAACTAGTAATTCATCTTCCACAAAATCGTCTAAGCCTCAAAATACAGCCGAAGTTGTTGCTTTAAAAGACACCAGGGAGGAAGAAACAGACAAGAAACAAAGAATTTCACCTCGCCTTAAGCTTATGGAGAAAAATACATCTGTGGAGAGCTTGCAAAAAGAGAACAACAATAACACAAACACACAAACAAAAAAGAAAACGGAGCACAAGAAATTGGAAAATAACAAAAACAAACAGCAAGAGACAAGCAAATGTTTGGACAACAATAAATCTAATGAGAGTAACAACAAAAACTTGGAAAATAATCGTAATATCGAAAATTTACGCAAATCTCCTGTCAATGTTCCTCAGGCGTCAAAGAGTCGCCGCGGCAGTAATAATTCCACTTGCAGTGTAGCCTCTACGATAGCCTCAGATACGGCCGAAACTGAATCCTGTGGCAATATTTATGTCTTCAATTTGCAACAGAAACTTATATTCAATTGTGAATTTTGTGATTTGAAATATGGGGATATGGAGAATTTTGGACGTCATCTCCATGAGGCCCACAAACTATTCAGTTTCGATGAAGATCCTGAAAAAGAAAATGCTCCTAGAAATTTGCGTAAAAGCAATCGTATGTCTAATACTAATAATGCCGCCAATGTTAAAAAAGAACCCCTACAGTGTCTAGATGCGTTGAACGAACCGCCACCTGTTGTTGCTTTGCCGCTTTCCGTTTTGGCTGAACCTTTAGAATCATGTGGCAATGTTTTTATGTTGAATCATCGTAAATTGTTTTTGGTGTGTGGCTACTGTGAGTGTAAGTACGCCAATTTGGATTTGTTTGAGAAACATTTAAGACAACAGCATCGTATTTTTGAGGGTTGTCGCAATGAGGTGAATGTGGTGCCCAAGGTGGAGATCAAACAGGAGATGTTTGTTATTAGCGAAGTGGTGGGACAACAGGATCATATAGCTCCACAAGCTATGGTCAGCATACCAGCAGAAGTTCCTTTAGATATAAGTATTTCACCAGAAAATGAGGCTGCCACAATAGCGGCTTTAGATGAAACAATGGAAATGGAAGAAGATGTTCATAACGAACAGCCTACATCATCCTCCTGTGCTGCGGCAGACAATGGCTTGGTTTCTACTGTACTTAAGGATCCATTAGCTAAGAATGTCATAACGAATGAAAATTCGAATTCAAAAGATAGTGAAAATTTGTTAGAAGCTATGGATGTGGAAAAGCCTATTGCTGTTAAGAAACCGAGAAATAAAAGACGTTCGTCTCCTGTTAAACCTTTAGTTTCGCCTAATAAACGTCCTAAAAGAAATACCAGGAAAAAAACAAAAGCTCAAGAGGAGACCACTCCTGCAATTTTGGAAGTTAATGTAGCTGAACAAATTGCTGCCACAGAACCAACTCAACGTATGGAAACAGAAAATGTCAATATAACTATAACATCTCCAGACACTAAACCTAACATATCAAAGGAGTCTACGAAAGCAACTCCTGAAGAATCTACAGAAACTAAAGAACCACAGACAATCACAAATCCAGACAAATCAACTGAAATTGAGAAAGCAACTGTTCCAGAACCGACAGAAACTAAAGAAATCAAAAAGCCCACAAAAACGAAGAAAACAACTTCTGCAGAGACGACAGCAACCAAGAAGTCTACCAAAACTGCACAATTTAAGAAATCAAATTCTCCTGAAACAATAGCTACCGAGACAACAACAAAAACAGTAGAATTTAAGAAACCTATATCCACAGAAACATTAGTAAACAAGAAATCCACAAAATCAGCGGAATCTAAGCAGACAACACCTCTAGAAACGGTAGATACCAATAACACCACAAACATCGCAGAATTTAAGAAAGCAACTTCTCCTGAAGTAGTAACAGAAACCAAGAAACCAATAAAATCGGCAGAATCTAAAAAATCCAATCCTAAACAAACGGCAGAAGCTAAGGAAATCAAGACTCTCACAAAACCTGCAGAATCCAAGAAACTAACAACTATCAAAACAATAGAAATAATAGAAACCAAGAATCCTACAAAAACTGTAGAATCCAAGAAAGTAACACCTATAGAACCAACAGAAACCAAGAAGTCTACAAAAACTGCTGAATCCAAGAAGTCTACAAACACTGTAGAATTCAAGAAACCCACAGCAACTCCAGAAACTAAAGAAACCCGAAAATCACCTGCAGTAATCCCCGAACCTCCAGTAATCCCGGAAACTAAAGAAAGCGGAAAATCTATAAAATCAGCAGAAACAAAGGAACCAACAATTGCTGTATTAAGTTCAGAAACTAAAGTAAACAGAGTAACAGTAAAAGCACAAGAATGCAACAAACCAATAGCACAAGTAACTGAAGAAACCAGAAAAACTACAAAATCACAAGCAATAACAACTCAAGAAATAAAAGAAAACAGGAAATCTACAAAATTAGAATCAAACGAACCAACAATAACACCTGAAGAAACAACAGAAGCTATAACAGAGCCAGAATCGAATAGTTTTAGAACACAAGAACTCTTGGAAATTCAAATACCTACAAAAGTTGAAGCAAGAAAACCTAAAGAAACTAAGAAAAGCAGAAAATCAACAACTAAAGCTCCTAGAAAATCCACAGAAACAAAAAAACCAACCAAGCAGGAAACACCAGACTCGGAAATTGAACCGGAATCTAGTGAAACTGAAATGCAGTGTAACGAATGCGACAAGAAATTTTCGCGACGCGAAAGTTTGAAAATACACAAACGCGTACATACCGGCGAGAAGCCTTTTGTGTGCGATATTTGCCAGAAAACTTTCCGGGCCAAACAAAATCTCACCATGCACAAAAAGTTTCACATGGGCGATGCTTCCAAAACCTTTGAATGTGAACACTGTGACAAGAAGTTTATGCGCAACACCGATCTAAGGGTGCACATGCGAACGCATACGGGTGAGAAGAAATTCAAGTGTGGCATCTGTCTGCAAGGTTACGCCTCGAAAGTCAATGTACAGACTCACATAGAGAGAGATCATTTGTCGGCAGATGGGGTAGTGGGCACACCACCTCGTGGTAAAAAGAAATCGGGGCCCAATTTCAAGGTCTTAAGGGAAGAGTTGGAGTATCAAAAGAAAATCATCGAAGAATTGCAAAAAGCCAAAAAAGAAAAAGAAATCATCACACCAACTTTACAGCCAACAACACCACCACCACCCCCCTCCCACGAGGAGCAGTTGACAGAACAAACGCTGCACTACGCAGAGGACGGCACTGACATGCAAGATCTCAATGCTGATCCGGTTAATGATATAATTGAACAAATACAAAATGAAATTTTACTAAGCGAACAAGAACGCCAACAAGAAAATGTTCAAGCCAACTCGGTAACCTTCACCATAAACACTGTTCCCGATAGTAATGAAGCCTTAAAGCTACACAACAATGCTAACGCCAGCACAACCTCAATTGTCCTAGAGTCACAAGCCAATGAACTGTTAAATTCTCCCGTAGACATAAAACCTACGCTGTTGCAAGTTGTTAAACGTTATGTCTGCGATCAGTGTAATCGTACGTTCAAGAAACACATACGCCTAGTGGAACATAAACGCGTGCATACGGGCGAGAAACCTTTTGGTTGCGACGAATGCGGCAAACAGTTTCGCATACGTATGCGTCTGAACGAACACAAACTACGACATTCCAAAGACAAGAAATTTAAATGTGAAATCTGTGGTTTGGGCTGTTGCACCAAGCAGGACTTGAACTTACACATGCGTCATCATACCAATGACAAGCGTTTCCAATGCTCCATGTGTCCGAAGGCATTTGTGCGTAGCTCAGATTTGAAGATACATGTACGTGTACACACCGGTGAAAAGCCGTATGTCTGCGACATATGTCACAAATGTTTCCGGGCCAATCAAAATCTCTGCGTGCACAAAAAGTCTCACATGGGAGAGGCCTCCAAAACCTTTCAATGTGAACACTGTGAAAAGAAGTTTATGCGCAACATTGATCGCAAAGTACACATGAGATCACACACAGGTGAGAAGCCCTACAAATGTGAGATTTGTCAACGTGGCTACTCTTCGAAATTCAATGTACGTGCCCACATAGAAAGAGATCACATATCGGCTAATGGTATGGGCACACCAGCCAAGGATAAAAAGAAACCAGGACCCAAACCCAAGGGCTTAAAGGCCGAATTGGAGAAACAAAAGAAACTCATAGAGGAATTGCAACATCAACTGTTGCAACAGATAAAAACCGACGAAAAGATCATACCCTGCGAAGAAGAAATCTTACCACACGACACTTTACAAGATTGCACCATAACAGCCTCCTCGCCTCTTGTCAGCAGCAGCAGCAGCAATGATCCCATACAAAATGCTTACGATTTGCTGAAAAAACTGAAATCAGCTACAGCTACAACTACCTCTAAACCCTTAACTATAATTCCATCGCCTCCTCCAATGGCAGAGCCAGCCTCAAATCCCTTTACAAAAGCCAAAAAGGCCTGCTCCACTTTACTACCTCTGACCATAACTCAAAAAATTGAACAACACTCACCGGTGCCCTCCACCTCATCAAGTACATCGCTATCATGTCTTACAACACCCTCACCGCCCAAGACCACAGCCACCAAGGTGGTGTCACAAAAGACTTCGCTGGGCATACAACAAGTATCGGTGACCGTATCCATGCAGGTGGAAAATGTAACAGCAGCCAATTCCCCTACCACCCCCGAGACAGAGAATGCTGGCATTTTGACAACAAGCTCGAGCGGCGGCGCTACAACGACAATGGCCAGCGTTAAGAAGGAACGGAAAATAACAAGTTATTTTACGGTGGTGGGTCAAAAGGCAGATGCTTAA
Protein Sequence: MINTLLEHVPIKMEVKDIDEEATDNAANEETGLEMANDDEEIDETDEELDEEDEEDEEEEDEEESETETDALEIEQEATMLISSDEEAELEAQRIRFPDKMAVKKLRRDSLKSSRSSSRNSQTSNSSSTKSSKPQNTAEVVALKDTREEETDKKQRISPRLKLMEKNTSVESLQKENNNNTNTQTKKKTEHKKLENNKNKQQETSKCLDNNKSNESNNKNLENNRNIENLRKSPVNVPQASKSRRGSNNSTCSVASTIASDTAETESCGNIYVFNLQQKLIFNCEFCDLKYGDMENFGRHLHEAHKLFSFDEDPEKENAPRNLRKSNRMSNTNNAANVKKEPLQCLDALNEPPPVVALPLSVLAEPLESCGNVFMLNHRKLFLVCGYCECKYANLDLFEKHLRQQHRIFEGCRNEVNVVPKVEIKQEMFVISEVVGQQDHIAPQAMVSIPAEVPLDISISPENEAATIAALDETMEMEEDVHNEQPTSSSCAAADNGLVSTVLKDPLAKNVITNENSNSKDSENLLEAMDVEKPIAVKKPRNKRRSSPVKPLVSPNKRPKRNTRKKTKAQEETTPAILEVNVAEQIAATEPTQRMETENVNITITSPDTKPNISKESTKATPEESTETKEPQTITNPDKSTEIEKATVPEPTETKEIKKPTKTKKTTSAETTATKKSTKTAQFKKSNSPETIATETTTKTVEFKKPISTETLVNKKSTKSAESKQTTPLETVDTNNTTNIAEFKKATSPEVVTETKKPIKSAESKKSNPKQTAEAKEIKTLTKPAESKKLTTIKTIEIIETKNPTKTVESKKVTPIEPTETKKSTKTAESKKSTNTVEFKKPTATPETKETRKSPAVIPEPPVIPETKESGKSIKSAETKEPTIAVLSSETKVNRVTVKAQECNKPIAQVTEETRKTTKSQAITTQEIKENRKSTKLESNEPTITPEETTEAITEPESNSFRTQELLEIQIPTKVEARKPKETKKSRKSTTKAPRKSTETKKPTKQETPDSEIEPESSETEMQCNECDKKFSRRESLKIHKRVHTGEKPFVCDICQKTFRAKQNLTMHKKFHMGDASKTFECEHCDKKFMRNTDLRVHMRTHTGEKKFKCGICLQGYASKVNVQTHIERDHLSADGVVGTPPRGKKKSGPNFKVLREELEYQKKIIEELQKAKKEKEIITPTLQPTTPPPPPSHEEQLTEQTLHYAEDGTDMQDLNADPVNDIIEQIQNEILLSEQERQQENVQANSVTFTINTVPDSNEALKLHNNANASTTSIVLESQANELLNSPVDIKPTLLQVVKRYVCDQCNRTFKKHIRLVEHKRVHTGEKPFGCDECGKQFRIRMRLNEHKLRHSKDKKFKCEICGLGCCTKQDLNLHMRHHTNDKRFQCSMCPKAFVRSSDLKIHVRVHTGEKPYVCDICHKCFRANQNLCVHKKSHMGEASKTFQCEHCEKKFMRNIDRKVHMRSHTGEKPYKCEICQRGYSSKFNVRAHIERDHISANGMGTPAKDKKKPGPKPKGLKAELEKQKKLIEELQHQLLQQIKTDEKIIPCEEEILPHDTLQDCTITASSPLVSSSSSNDPIQNAYDLLKKLKSATATTTSKPLTIIPSPPPMAEPASNPFTKAKKACSTLLPLTITQKIEQHSPVPSTSSSTSLSCLTTPSPPKTTATKVVSQKTSLGIQQVSVTVSMQVENVTAANSPTTPETENAGILTTSSSGGATTTMASVKKERKITSYFTVVGQKADA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259088;
90% Identity: -
80% Identity: -