Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_942486075.2
Location
CALNXM020000002.1:2686915-2692004[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1 2.1e+04 -7.5 11.2 90 109 71 90 17 128 0.40
2 4 0.7 1.5e+04 -4.2 8.0 63 107 84 128 61 147 0.38
3 4 0.29 6.1e+03 -2.9 0.7 80 114 266 287 243 318 0.43
4 4 2.7e-95 5.6e-91 304.5 7.9 2 218 431 633 430 633 0.92

Sequence Information

Coding Sequence
ATGTTTACACCCATTAAAAACTTTATAACATACATACAAAAGAATGCTAGTGGAAATTCAATATTTGGAGGAAATAGTACAGCAGAAGAAACAGCAAAAATGGAAACAGAAAATATGAAAATAGAACAAGAAACAGAAACAGAAACAGAAGCAGCAACTGTAACTGTAACATCATCACCAACAATGCAGTCGGAAAATGAAATTCCAAAAGAAACAGTAGAAAAGGATCCTGTTATAAATAAAGAAGAAGAGGAACAAGAACAAGAAATGAGTGAAGAAACCAAAGACTTTTCCAGCTCGGAGGAAAAAGAGTCTGAAACAAAAACAACCACAGTAACGACAACATCTACAGTATCCACAGAAAATTCCTGTGAATTTGAGGATGATGATATAGAGGCACAAATCGAAACTAGTATTATGTTGAAGAAACCAGTTAAATTGGCAGCCACAGATAGCTCCGATATTTTGATGGTCAAAAGTACAGCAAATGCTAATTGCAGCAGCATTGTTATACACCATGATTTTAATCGTACTCAGGCCTTAAGTCCTATTGACGATGAATTGGATGATTTCAGACATGATCCAACAGAAGATGATGAAGAAGAGCCGTTTTTGGATTTGAATAATTTTAAAAATAGCAATGTAATCGTTTTAGATGAAGTTGACTTAAATGCCTCTACGAATTCTATTGACACGATCAACACAACTGACGATCCCTTAGCTATAGCGTGCGAAGAGCAGGAAGCATTTGCTGCCGATAAAGCAGCTGCATTAGAGGAATTAAATTTACTCAATAGTTCGCAAACTTCACAGGATGATGATACTCGCACAACCACCGAAGATGACTTGCAGTGGTTGAAAACCGATCTAGAAGATAATACACCATCATGCAGCAATAAAGTGCTGCTTAAAGATGCTGTCTCAGAAGTAACGCCCGAAAAGGAAGAGCGTAATGGTGAGGGTTCCGATTCCGGTTTAGGCAGTGAAACATCAGCCTTACACACGACCACAACAAGTATTACCGATACTAGCCAATTGAACATGACCGCCGCAACACCAACGCAGACTCCCACTCATCAAGCGAAAGCGAAAGACAGTGACAAATTAATGAGCTCGAATATGCTGCAACTAGCAAAATCACCACCAAAGGATCCTCCAAAACCATACAGATCAAACTTAAAACGACGTTTAGAAGTTGACGACGATGTTGTTGAGGGTTTGAATTCGCTAACAGCCACTACATCTTCACTTAGTGATCATAGTTCTATAACAGGCAGCATACAAAAGAAATCAAAGCGTTCAATAAATTTCGATACCGTACAAGTCTACTATTTCCCCCGACAACAGGGCTTTAGTTGTGTACCCTCGGCGGGTGGTTGTACTCTAGGCATGGGAGCTAGGCATGTGGCCTTTAAAACATTAACATTAGCTGAGCATGCAGCTGAACTAAGAAGAGCTCATCGCATGCAATTACAGGAAATTAACCCAAGAGGTTCCTCTAGTGACGATAGTGAAGAGTCCGAAGAAGACTATCTAAGTGAGGGCAGCGGTTCTGATTTGGATGGTGAGTCGAATGGTTTCCTACAGCCTGTTTCGCCCAAACAGCGAAGGGCTTTGCTGAAAGCGGCTGGCATACGTAAAATAGATCCCAGTGAAAAAGCTGATTGCCGCAACATCCGTAATAGTCGAGAGGTCTGCGGTTGTACTTGTCGAGATTTTTGTGATCCCGAAACTTGTGCTTGCTCCCAATCTGGCATCAAATGTCAAGTTGATCGTGATATGTTTCCTTGTGGCTGCTCTCGTGATGCCTGCGGCAATACAATTGGACGTGTAGAATTCAATCCGACTCGTGTGCGCACCCATTACATACACACCCTAATGCGTTTGGAGATGGAAAATCGTCAACAACAAAATCCTTACTCTTCTGCCGTTGCCTCACCCATGCAAGCAACACCCTCCTCGTATTACCAATCCCATTTGCAACCACAATCGAATTACAGTTCGGGTTATGCATCTCCGGCCTACAATACTGCCTCCGAACTACATCAACAAACGGCTGCCAGTTCGTACTATCTCACACAAAACCCTTCCACATCCAACGGTCTGTATAGCCAACAACCCTCTTTAGAAATGACACACAATGGTAGTGGGGCTACCGCTGCCACTGCAACGCAATATGGCATTGATAGTTTGGATACAAGTCTTTTTGGTGGCACCCCCACAGCAACTCCATCATATGGTGAACTAATGCCGGTGACTGCGTATCATTATGGAAATGTACAAACACAAGCATTACCATTCAATTCCTATCATAATACCCCCTACATCAATGCGAACAATGCCAATGCCACAACTTCCCTTAACACACCGAACACCTATAGTTCATGTGCCGTGCCCTCTATACCACCCTATGGTACAGCTACGACTACCGAAGCTACAGGTGTTTATCACAGTGTAAGTAGTTTAACTAGCTTAGAGACAACCACTGCGCCCAGTTGCAGTGTCAATGGTACGACCTCCTTAGAAAATGATGCCAGTTCCAATTTTATAAGTCTATCCACTCCACTGGCCAGTTCCTCAAGACTATCACAAATAAATGATTTACTACAACACAATCGTAATGCAACAACGGCTCTTGTGGCGGTTTCACCAATTAAAGGAGCCACTAACGATGACTCAGCAGCAGCAACAACCGTGTGTACAACACAAGTCAATGTTGATAATTTGCAAACAAACATCTCGTCATCTTGCCCATCAATTAATACGCCACCTATAGAAGATGCCCACAAAAACTGCATGACCTATGAAGAGTTAGTGCCACCTTTAAAGACGATCCCCACAGTGGCAGTTATTAAAAGTGACATTAGCAGTGGACCAGTTAAACCAACAACACCTACACTACCAGAGACAACAGTGACAGCAGTAACTTTACCTATAGAAGAAGTGCAATCAACATCATCACCAGCATCGTCTTCATTAAATGCAGAGATTTTGCCACAAACTTTGGCTTTGTGTAAAAGTGAGCAAGATAGCAACACGTTAGCGGCGGTAAGTGCAACCATAGAACCTTCAACTATTGATGTGGCAGCTGGAAACTAA
Protein Sequence
MFTPIKNFITYIQKNASGNSIFGGNSTAEETAKMETENMKIEQETETETEAATVTVTSSPTMQSENEIPKETVEKDPVINKEEEEQEQEMSEETKDFSSSEEKESETKTTTVTTTSTVSTENSCEFEDDDIEAQIETSIMLKKPVKLAATDSSDILMVKSTANANCSSIVIHHDFNRTQALSPIDDELDDFRHDPTEDDEEEPFLDLNNFKNSNVIVLDEVDLNASTNSIDTINTTDDPLAIACEEQEAFAADKAAALEELNLLNSSQTSQDDDTRTTTEDDLQWLKTDLEDNTPSCSNKVLLKDAVSEVTPEKEERNGEGSDSGLGSETSALHTTTTSITDTSQLNMTAATPTQTPTHQAKAKDSDKLMSSNMLQLAKSPPKDPPKPYRSNLKRRLEVDDDVVEGLNSLTATTSSLSDHSSITGSIQKKSKRSINFDTVQVYYFPRQQGFSCVPSAGGCTLGMGARHVAFKTLTLAEHAAELRRAHRMQLQEINPRGSSSDDSEESEEDYLSEGSGSDLDGESNGFLQPVSPKQRRALLKAAGIRKIDPSEKADCRNIRNSREVCGCTCRDFCDPETCACSQSGIKCQVDRDMFPCGCSRDACGNTIGRVEFNPTRVRTHYIHTLMRLEMENRQQQNPYSSAVASPMQATPSSYYQSHLQPQSNYSSGYASPAYNTASELHQQTAASSYYLTQNPSTSNGLYSQQPSLEMTHNGSGATAATATQYGIDSLDTSLFGGTPTATPSYGELMPVTAYHYGNVQTQALPFNSYHNTPYINANNANATTSLNTPNTYSSCAVPSIPPYGTATTTEATGVYHSVSSLTSLETTTAPSCSVNGTTSLENDASSNFISLSTPLASSSRLSQINDLLQHNRNATTALVAVSPIKGATNDDSAAATTVCTTQVNVDNLQTNISSSCPSINTPPIEDAHKNCMTYEELVPPLKTIPTVAVIKSDISSGPVKPTTPTLPETTVTAVTLPIEEVQSTSSPASSSLNAEILPQTLALCKSEQDSNTLAAVSATIEPSTIDVAAGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00258871;
90% Identity
iTF_00258871;
80% Identity
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