Cvic008894.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- CSRNP3
- Assembly
- GCA_958450345.1
- Location
- OY288233.1:35979775-35984220[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.069 1.2e+03 0.1 6.0 82 104 70 94 11 140 0.45 2 3 0.58 1e+04 -2.9 0.6 78 112 258 279 235 310 0.49 3 3 3.8e-95 6.7e-91 305.0 7.3 2 218 425 627 424 627 0.92
Sequence Information
- Coding Sequence
- ATGTTTACACCCATTAAAAACTttataacatacatacaaaagaaTGCTAGTGGAAATTCAATATTTGGAGGAAATAGTACAGCAGAAGAAACAGCAAAAATGGAaacagaaaatatgaaaatagaACAAGAAACAGAAACTGCAACTGTAACTGTAACAGCAACAATGCAGTCAGAAAATGAAATTCCAAAAGAAACAATAGAAAAGGATCCCGTTACAAATAAAGAAGAAGAGGAGCAAGAACAAGAAATGAGTGAAGAAACCAAAGACTTTTCCAGTTCGGAGGAAAAAGAGtctgaaacaaaaacaaccacagTAACGACAACATCTACAGTATCCACAGAAAATTCCTGTGAATTTGATGAAGATGATATAGAGGCACAAATCGAAAGTAGTATTATGTTGAAGAAACCAGTTGAAATTTCAGCCACAGATAGCTGCGATATTTTGGAGATCAAAAGTACATCAAATGCTAATTGCAGCAGCATTGTTATCAACCATGATTTTAATCGTGCTCAGGTCTTAAGTCCTATTGACGATGAATTGGATGATTTCAGACATGATCCAACAGAAGATGATGAAGAAGAACCGTTTTtagatttgaataattttaaaaACAGCAATGTAATCGTTTTAGATGAAGTTGACTTAAATGCATCTACGAATTCTATTGATACGAACAACACAACTGACGATCCCTTAGCTATAGCGTGCGAAGAGCAGGAAGCATTTGCTGCCGACAAAGCAGCTGCATTAGAGGaattaaatttactaaataGTTCACAAACTTCACAGGATGAAGATACTCGAACAACCACCGAAGATGACTTGCAGTGGTTGAAAACCGATCTAGAAGATAATACACCATCATGCAGCAATAAAGTACTGCTTAAAGATACTGTCTCAGAAGTAACGCCCGAAAAGGAAGAGCGTAATGGTGAGGGTTCCGATTCCGGTTTAGGCAGTGAAACATCAGCCTTACACACGACCATCACAAGTATTACCGATACTAGCCAATTGAACATGACCGCAGCGACACCAACGCAGACACCCACTAATCAAGCGAAGGCGAAAGACAGTGAAAAATTAATGAGCTCGAATATGCTGCAACTAGCAAAATCACCACCCAAGGATCCTCCAAAACCATACAGATCAAACTTAAAACGACGTTTAGAAGTTGACGACGATGTTGTTGAGGGTTTGGGTTCGCTAACAGCCACTACATCTTCACTTAGTGATCATAGTTCTATAACAGGCAGCATACAAAAGAAACCAAAGCGTTCAATAAATTTCGATACCGTACAAGTCTACTATTTCCCCCGGCAACAGGGCTTTAGTTGTGTACCCTCGGCGGGTGGTTGTACTCTAGGCATGGGAGCTAGGCATGTGGCCTTTAAAACATTGACATTAGCTGAGCATGCAGCTGAACTAAGAAGGGCTCATCGCATGCAATTACAGGAAATTAACCCCAGAGGTTCCTCTAGTGACGATAGTGAAGAGTCCGAAGAAGATTATCTAAGTGAGGGCAGCGGTTCTGATTTGGATGGTGAGTCGAATGGTTTCCTACAGCCTGTTTCGCCCAAACAGCGAAGGGCTTTGCTGAAAGCGGCTGGCATACGTAAAATTGATCCCAGTGAAAAGGCTGATTGCCGCAACATCCGTAATAGTCGAGAGGTCTGCGGTTGTACTTGTCGAGATTTTTGTGATCCCGAAACTTGTGCTTGCTCCCAATCTGGCATTAAATGTCAAGTTGATCGTGATATGTTTCCTTGTGGCTGCTCTCGTGATGCCTGCGGCAATACAATTGGACGTGTAGAATTCAATCCGACACGTGTGCGCACCCATTACATACACACCCTAATGCGTTTGGAGATGGAAAATCGTCAGCAACAAAATCCTTACTCTTCTGCCGTTGCCTCACCCATGCAAGCAACACCCTCCTCGTATTACCAATCCCATTTGCAACCACAATCGAATTACAGTTCGGGTTATGCATCTCCGGCCTACAATACTGCCTCCGAACTACATCAACAAACGGCTGCCAGTTCGTACTATCTCACACAAAACCCTTCCACTTCCAACGGTCTGTATGGCCAACAAACCTCATTAGAAATGACACACAATGCTAGTGGGGCTACCGCTGCCACTGCAACCCAATATGGCATTGATAGTTTGGATACAAGTCTTTTTGGTGGCACTCCCACAGCAACTCCATCATATGGTGAACTAATGCCGGTGACTGCTTATCATTATGGAAATGTGCAAACACAAGCATTACCATTCAATTCCTATCATAGTACCCCCTACATCAATGCGAACAATGCCAATGCCACAACTTCCCTTAACACACCGAACACCTATAGTTCATGTGCCGTGCCCTCTATACCACCCTATGGTACAGCTACGACTACCGAAGCTACAGGAGTTTATCACAGTGTAAGTAGTTTAACTAGCATAGAGACAACCACTGCGCCCAGTTGCAGTGTCAATGGTACGACCTCGTTAGAAAATGATGCCAGTTCTAATTTTATAAGTCTATCCACCCCACTGGCCAGTTCCTCAAGACTATCACAAATAAATGATTTACTACAACACAATCGTAATGCAACAACGGCTCTTGTGGCGGTTTCACCAATTAAAGGAGCCACAGACGATGACTCAGCGCCAGCAGACGCAGCAACAACAGTGTGTACAACACAAGTCAATGTTGATAATTTGCAGACAAACATGTCGTCATCAAGCTCATCAACTGAAACGCCACCTGTAGAAGATGCCCACAAAAACAGCATGGCCTATGAAGAGTTAGTGTCACCTTTAAAGCCGGCCCCAACAGTGGCAGTTATTGAAAGTGACATTAACATTGGACCAGTTAAACCAACAACACCTACACTACCAGAAACTACAGTGGCTGCAGAAACTTTACCTATAGAAGAAGTGGAATCAACATCATCACCAGCATCGTCTTCATTAAATACAGAGATTTTGCCACAAACTTTGGCTTTGTGTAAAAGTGAGCAAGATAGCAACACGCTAGCGGCGGTAAGTGCAACCATAGAACCTTCAACTATTGATGTGGCAGCTGGAAACTAA
- Protein Sequence
- MFTPIKNFITYIQKNASGNSIFGGNSTAEETAKMETENMKIEQETETATVTVTATMQSENEIPKETIEKDPVTNKEEEEQEQEMSEETKDFSSSEEKESETKTTTVTTTSTVSTENSCEFDEDDIEAQIESSIMLKKPVEISATDSCDILEIKSTSNANCSSIVINHDFNRAQVLSPIDDELDDFRHDPTEDDEEEPFLDLNNFKNSNVIVLDEVDLNASTNSIDTNNTTDDPLAIACEEQEAFAADKAAALEELNLLNSSQTSQDEDTRTTTEDDLQWLKTDLEDNTPSCSNKVLLKDTVSEVTPEKEERNGEGSDSGLGSETSALHTTITSITDTSQLNMTAATPTQTPTNQAKAKDSEKLMSSNMLQLAKSPPKDPPKPYRSNLKRRLEVDDDVVEGLGSLTATTSSLSDHSSITGSIQKKPKRSINFDTVQVYYFPRQQGFSCVPSAGGCTLGMGARHVAFKTLTLAEHAAELRRAHRMQLQEINPRGSSSDDSEESEEDYLSEGSGSDLDGESNGFLQPVSPKQRRALLKAAGIRKIDPSEKADCRNIRNSREVCGCTCRDFCDPETCACSQSGIKCQVDRDMFPCGCSRDACGNTIGRVEFNPTRVRTHYIHTLMRLEMENRQQQNPYSSAVASPMQATPSSYYQSHLQPQSNYSSGYASPAYNTASELHQQTAASSYYLTQNPSTSNGLYGQQTSLEMTHNASGATAATATQYGIDSLDTSLFGGTPTATPSYGELMPVTAYHYGNVQTQALPFNSYHSTPYINANNANATTSLNTPNTYSSCAVPSIPPYGTATTTEATGVYHSVSSLTSIETTTAPSCSVNGTTSLENDASSNFISLSTPLASSSRLSQINDLLQHNRNATTALVAVSPIKGATDDDSAPADAATTVCTTQVNVDNLQTNMSSSSSSTETPPVEDAHKNSMAYEELVSPLKPAPTVAVIESDINIGPVKPTTPTLPETTVAAETLPIEEVESTSSPASSSLNTEILPQTLALCKSEQDSNTLAAVSATIEPSTIDVAAGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00259760;
- 90% Identity
- iTF_00259760;
- 80% Identity
- -