Cvom005130.1
Basic Information
- Insect
- Calliphora vomitoria
- Gene Symbol
- -
- Assembly
- GCA_942486075.2
- Location
- CALNXM020000110.1:1162939-1164841[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3e-09 1.2e-05 25.6 0.1 2 167 6 194 5 196 0.75 2 3 1.3 4.6e+03 -2.4 0.2 12 47 312 347 308 364 0.65 3 3 1.4 5e+03 -2.5 0.0 98 122 352 376 330 384 0.83
Sequence Information
- Coding Sequence
- ATGAACCAGGGGCTTTACATAGAAATTCAACCAAAACAAAACATTCATTTTCGGTATAAGAGTGAAATAGTAAAACCAGGAAATACACACGGTGTATTGAAAGGCCAACAAGAAGAAAAATATCCTAAAATTGTATTACGTTTGCCAGCAAATAAAAAAAATAGTGAATTTTTCGTGCTTTGTTCATTGCATCATTTTGAAAATACTAAAACTCTTTCGCCACATCTTCTAATGCGAAAAGGAGTAACGGAACTTAACTATGAATTTATATTTGAACAAGTGGAAATGGTTGAAGGCAATCCACTGGAGCGAGTCTGGCAGTTAAGAGACTATGTTATTGTGCGTTTAAAAAAAGCGGAATACAATAATTCATTTACCAATAAAAGGGCCGCATACGAACGTCTACAATTACCTACGTTAACTTTCGAAGAACTACTAGGACCGTTGAATTTAGATGATCCTCAAAAAGTACAAGACAGTGCAAAATTAAACGTCTGTCTGGGCTTTACGATATTCGAAAAAAAAGCTAAAGCAAAGGAATATGCTTTGTATAGGAAAACAATTTATTCCTGTAACATCTATCATGGTGATGATTTAGGCATCCACAAACTTTGTAATACCAGAGGAAGTACACTTGGAGGCACCGAAATAACCATCTTAATCAGATATGAGTCTAATTTGCCACTTAATGTTTTCATAAAGAAAATCGATGAAAATACCAGAGAAACCGTATGGTTCACAAACGTTAGAATTTTAGAAGAGAACCTATTTCATAATGCTGCCGTAACTTTTACAATGCCACCATATCAAGGACCCGAAAGTGAGGATGACGAAATTGAAGTATATATGTGTGTTATGGTGGAAAACACCACGTACAAAAGCGATACTGCAAAATTCTTCTATCTCAATGATAGGACACGTAAACGTCCAAGAGTAAGAGCACATTACGATTACACTTCAGAACAAAGAGGAAATGTATCAAGTCAATCGAGTAATGTACGTTATGTATCATATGATCATGCTACTTTGCCGGAGTTTAATGCAATTAATGAAATAGTTTGCACTAAGAATGTCGATATTAAATTTAAAATTGATCAAATTTTCAAAACTGCAAAGAATCCTAATCACATTGTGCCATATCAACATTTGTATTCCATATTTTACGATGCATTAGAATCGGAGGAAGCATTCAAACATCTTTATAAAATGGCCAATGATGCAAGTAACAATAATCTGGTTACAGATTTTCGCAATGAAAATCGTGAAAATCTCTTGCACTTGGCGTGTCAAATGAACAAGTTCAAAAGAATACGTCCTTTAATTGGACTGGGATGTCATATCAATGAGCAGGACTACATCGGAAGAACACCGTTGCACGTCGCTCTGGCTGAACAACATAACGATTGTGTTGCGGAAATTTTGTTTATCTTTAACAACATTTCAAAGTATCCCAAAGAAGTTGAAACTGATTTAATGAAAATGATTACGGCCTACAATCACGATGGGCATACAGTTTTACATGACGCCATGCTCGGCCAATATAAGGAATTATGCGAAGCTATGTTAATGTTCATGCATAAATACGATATCAATGTTTTGGAATATGAAGTGTTGGGAAGTGGTGATTCCATTGTACATTTAGCTGTTAAACACAATCTTACGACGATTTGGCCTCTTATAGAAAAATATGTGCCAAATTACAAGATGGTTAAAAATTATGCTGGTATAATGGTGCAGCAGTTGGAAGATGAAATGTTGGAAAAATAA
- Protein Sequence
- MNQGLYIEIQPKQNIHFRYKSEIVKPGNTHGVLKGQQEEKYPKIVLRLPANKKNSEFFVLCSLHHFENTKTLSPHLLMRKGVTELNYEFIFEQVEMVEGNPLERVWQLRDYVIVRLKKAEYNNSFTNKRAAYERLQLPTLTFEELLGPLNLDDPQKVQDSAKLNVCLGFTIFEKKAKAKEYALYRKTIYSCNIYHGDDLGIHKLCNTRGSTLGGTEITILIRYESNLPLNVFIKKIDENTRETVWFTNVRILEENLFHNAAVTFTMPPYQGPESEDDEIEVYMCVMVENTTYKSDTAKFFYLNDRTRKRPRVRAHYDYTSEQRGNVSSQSSNVRYVSYDHATLPEFNAINEIVCTKNVDIKFKIDQIFKTAKNPNHIVPYQHLYSIFYDALESEEAFKHLYKMANDASNNNLVTDFRNENRENLLHLACQMNKFKRIRPLIGLGCHINEQDYIGRTPLHVALAEQHNDCVAEILFIFNNISKYPKEVETDLMKMITAYNHDGHTVLHDAMLGQYKELCEAMLMFMHKYDINVLEYEVLGSGDSIVHLAVKHNLTTIWPLIEKYVPNYKMVKNYAGIMVQQLEDEMLEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -