Cvic022347.2
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- MAZ
- Assembly
- GCA_958450345.1
- Location
- OY288235.1:42180697-42183136[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00025 0.022 16.1 1.1 2 23 114 136 113 136 0.94 2 15 2.1 1.8e+02 3.8 6.7 1 23 142 165 142 165 0.97 3 15 1.1e-05 0.00094 20.5 1.0 2 23 173 194 172 194 0.97 4 15 0.0041 0.36 12.3 3.6 2 23 236 258 235 258 0.94 5 15 0.018 1.6 10.3 3.5 1 23 264 287 264 287 0.97 6 15 2.3e-05 0.002 19.4 1.4 3 23 296 316 294 316 0.97 7 15 1.5e-06 0.00013 23.1 4.6 1 23 322 344 322 344 0.99 8 15 2.3e-06 0.0002 22.5 6.0 1 23 442 464 442 464 0.99 9 15 0.0025 0.22 13.0 0.6 1 23 573 597 573 597 0.91 10 15 6.7e-05 0.0058 18.0 1.5 1 23 602 624 602 624 0.97 11 15 1.6e-05 0.0014 19.9 4.3 1 23 630 653 630 653 0.97 12 15 0.0094 0.82 11.2 2.7 1 23 663 685 663 685 0.98 13 15 9.1e-06 0.00079 20.7 1.2 1 23 691 713 691 713 0.98 14 15 2.7e-05 0.0023 19.2 0.3 2 23 720 741 719 741 0.96 15 15 1.4e-06 0.00012 23.2 3.2 1 23 747 769 747 769 0.95
Sequence Information
- Coding Sequence
- atgtCTCACAAATTAAATTCTAAGAAGAGTCGAGCAGACACCAATCAGCATAAACGTATACATAATAaggaaataaatacaataactaAATCGGCTATAGGATTTAACGATAATTCAAGAGCCCCAAATTATTGTAATGTGAAAAATGAATTAATAGACTGTTCAGAAGATCCGCATCTAAAAGGAGACAAATTCATTAAAGAGGAACCAGATTGTGTCAGTAATAATGAGCATTCAATTGATGAAGATGATGTTAACTGGGATAATAATGAAGACGTTGAAAAAAATAGACAGAAAACCTCCAGAATTTATAAGAGAAAAGTTTACCCCATTGAAAACAAATGTGTCATATGTAACAAGaaattttcttttcaaagaGATCTTGTGAGGCATGTGTTACAAAATCATCCTAATGGAAAAGCATTTAAATGTCAAAGTTGTTcaacattattttcaaaattaaagtcCCTATCTACACATTTTAAAAGATGTCATGCCAACTTGGCAAAGACCATTCCTTGTGAGTATTGCAACAAGTCATTTTTTGCCCAGTTTCAATTGGAACGTCACAGACGAACGCATACAGAACATAACGATTTGCCGTATTTGCACGTTGAAAATGGCGAAGAACCTGGAAATAACATAATGGATATAGATGAAGATATCTTCGGAAATCGAAAGGGAAAAATTTATCCAGTCGAAAACAAATGTGCTATTTGCAATAAGaaattttcttttcaaaaagaGCTTGTTAATCATTCCAAACATACTCATCCCAatgataaaacatttaaatgtcTATATTGTTCTAcggtattttcaaaattaaaatctgtGACTACACATTTCAAAAGAAGTCATTCCAAATCGAGAAAGACCATTTTTTGTGAGTATTGTGGCATGTCATTTTTTACCAGGTTCCTATTGGAACGTCACAGACGATCACATACAGAACAGCGACCATATTCATGCAATCAATGTGATAAAGCATACAAATATAAAAGGAATTTGTGTGTACACATGAGAACACACTCGAATGCTGATAAATCTTATAATAATAGTATAGAAGAGGATCATGAAGAGGATGATCATCAAAATCTTTCTGAGATTCCATTTATGGGAGATGAGTATTATGAGAATGATGATGAAAATATGTTCGCTGGAGATGAGTATTACGAGAATGATGAACAAAATCCAGTAACAGGGGGTGAGTGTTGGGATAATGATGATCAAATTATATTAGAAGATGATGTGGAAGAAAGCATTGATATGGCAAATCTTGCGactgttgaaaaaaatatgaataatatgtTACAGTATCCCTTCAAGTGTAATGAATGCGACAGAGTTTACAAGTATAAACATAATCTAAAGACCCATCAAAAAACTCATCAGAAAAATAATGAACTAACAGAGATCATAACTCTTGATGATGCCACAACAAGTGATCATGACAACTCCAACATTTACCAAAATACCTTTTTTATTATAGATGAGTTTAATACCGATTCGGAACACTGTGAAGATTTAGAAGAGGAAGAACAATTTCCAGCAGCACCTTACTCAAATGAGTTTGAATTTGTTCCGGataattcaatttgtatggcAAATACAGGAGACAACGAACAAAACGAATGTGGTGTTTGTATGAAATTATTTCAATGCCAGCAATCAGTAGCCAAACATGTGCAACGTTGTCATCCCGAAATCGAATTCTTTAAATGTCCATACTGTGATGATAATTTCTATAGCCTAGACTCGCTATCGCTGCATATAAATGTAAAGAAACATTTGCAAAAACGATTTGTTTGTGAACACTGTCTAAAGTCTTTTGATCGCATGACCGATTTGAGACGGCACGTACTAATACATACTGATGAGCGTCCTTTTTCGTGCAATGTATGTCATAAAtcctttaaacaaataaataatttaaaacgcCACAAAGAAACAATGCACGCTAACGAtaagtttaaatcaacaaaatttagTTGTACATTTTGTCCGAAGAGTTTTTTACATGCCGACATACTGAAACGTCATATGAGTAGACatgacaaaaaaaatgattATCCCTGTTCCATgtgcaataaaatattcaaaagcaGATATGATTGGCAGAGGCATGAACAAACTCATAGTTCAAGAAAAGATCTAATATGCGATTACTGCTTAAAATCCTTTGATAACATCGAAAATCTAAATCGTCATCTGAAGGTTCATACGggcgaatttaaatttttgtgtacaATTTGTAACAAAACTTTTAGACGGAAGAGTCATTTAATTAATCATGCTAAGGTCCAtagaaatttgtaa
- Protein Sequence
- MSHKLNSKKSRADTNQHKRIHNKEINTITKSAIGFNDNSRAPNYCNVKNELIDCSEDPHLKGDKFIKEEPDCVSNNEHSIDEDDVNWDNNEDVEKNRQKTSRIYKRKVYPIENKCVICNKKFSFQRDLVRHVLQNHPNGKAFKCQSCSTLFSKLKSLSTHFKRCHANLAKTIPCEYCNKSFFAQFQLERHRRTHTEHNDLPYLHVENGEEPGNNIMDIDEDIFGNRKGKIYPVENKCAICNKKFSFQKELVNHSKHTHPNDKTFKCLYCSTVFSKLKSVTTHFKRSHSKSRKTIFCEYCGMSFFTRFLLERHRRSHTEQRPYSCNQCDKAYKYKRNLCVHMRTHSNADKSYNNSIEEDHEEDDHQNLSEIPFMGDEYYENDDENMFAGDEYYENDEQNPVTGGECWDNDDQIILEDDVEESIDMANLATVEKNMNNMLQYPFKCNECDRVYKYKHNLKTHQKTHQKNNELTEIITLDDATTSDHDNSNIYQNTFFIIDEFNTDSEHCEDLEEEEQFPAAPYSNEFEFVPDNSICMANTGDNEQNECGVCMKLFQCQQSVAKHVQRCHPEIEFFKCPYCDDNFYSLDSLSLHINVKKHLQKRFVCEHCLKSFDRMTDLRRHVLIHTDERPFSCNVCHKSFKQINNLKRHKETMHANDKFKSTKFSCTFCPKSFLHADILKRHMSRHDKKNDYPCSMCNKIFKSRYDWQRHEQTHSSRKDLICDYCLKSFDNIENLNRHLKVHTGEFKFLCTICNKTFRRKSHLINHAKVHRNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00045480;
- 90% Identity
- iTF_00045480;
- 80% Identity
- -