Basic Information

Insect: Calliphora vicina
Gene Symbol: -
Assembly: GCA_958450345.1
Location: OY288233.1:47247154-47261787[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1e-05 0.00087 20.6 1.3 1 23 603 625 603 625 0.97

2 18 0.00019 0.017 16.5 0.5 1 23 631 653 631 653 0.97

3 18 8.5e-05 0.0074 17.6 0.6 1 23 659 681 659 681 0.98

4 18 6.4e-06 0.00056 21.2 3.0 1 23 687 709 687 709 0.97

5 18 8.5e-05 0.0074 17.6 4.7 1 23 715 737 715 737 0.99

6 18 0.00015 0.013 16.9 5.6 1 23 743 765 743 765 0.97

7 18 7.3e-07 6.4e-05 24.1 4.3 1 23 771 793 771 793 0.98

8 18 2.7e-07 2.4e-05 25.5 2.4 1 23 799 821 799 821 0.97

9 18 0.00016 0.014 16.8 6.7 1 23 827 849 827 849 0.97

10 18 0.00026 0.023 16.1 6.6 1 23 855 877 855 877 0.98

11 18 2.5e-05 0.0022 19.3 4.5 1 23 883 905 883 905 0.98

12 18 9.2e-05 0.0081 17.5 8.3 1 23 911 933 911 933 0.98

13 18 4.6e-06 0.0004 21.6 7.7 1 23 939 961 939 961 0.98

14 18 1.6e-06 0.00014 23.0 7.7 1 23 967 989 967 989 0.98

15 18 0.00051 0.044 15.2 9.5 1 23 995 1018 995 1018 0.95

16 18 0.00043 0.037 15.4 0.5 1 23 1024 1046 1024 1046 0.97

17 18 0.00044 0.039 15.4 4.7 1 23 1056 1078 1056 1078 0.98

18 18 2.3e-05 0.002 19.4 1.6 1 23 1084 1107 1084 1107 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1e-05	0.00087	20.6	1.3	1	23	603	625	603	625	0.97
2	18	0.00019	0.017	16.5	0.5	1	23	631	653	631	653	0.97
3	18	8.5e-05	0.0074	17.6	0.6	1	23	659	681	659	681	0.98
4	18	6.4e-06	0.00056	21.2	3.0	1	23	687	709	687	709	0.97
5	18	8.5e-05	0.0074	17.6	4.7	1	23	715	737	715	737	0.99
6	18	0.00015	0.013	16.9	5.6	1	23	743	765	743	765	0.97
7	18	7.3e-07	6.4e-05	24.1	4.3	1	23	771	793	771	793	0.98
8	18	2.7e-07	2.4e-05	25.5	2.4	1	23	799	821	799	821	0.97
9	18	0.00016	0.014	16.8	6.7	1	23	827	849	827	849	0.97
10	18	0.00026	0.023	16.1	6.6	1	23	855	877	855	877	0.98
11	18	2.5e-05	0.0022	19.3	4.5	1	23	883	905	883	905	0.98
12	18	9.2e-05	0.0081	17.5	8.3	1	23	911	933	911	933	0.98
13	18	4.6e-06	0.0004	21.6	7.7	1	23	939	961	939	961	0.98
14	18	1.6e-06	0.00014	23.0	7.7	1	23	967	989	967	989	0.98
15	18	0.00051	0.044	15.2	9.5	1	23	995	1018	995	1018	0.95
16	18	0.00043	0.037	15.4	0.5	1	23	1024	1046	1024	1046	0.97
17	18	0.00044	0.039	15.4	4.7	1	23	1056	1078	1056	1078	0.98
18	18	2.3e-05	0.002	19.4	1.6	1	23	1084	1107	1084	1107	0.96

Sequence Information

Coding Sequence: atgaatacTGATAATGCAATTGCTAATGCAACAACTCCTGGTGAGTCAACAACAGcggcaacagcagcaacattaTCAAATACAACTACCACAACTGTTTCAGCAGTTGCAACATCAAATGGCTATGATccgcagcagcaacaaaatcgTCATTCGCctttgcaacaacaacaacagcagcagcaacaacaatccCAATTAAATGAGtCGCGTCATATTTTAACTATTGTCCAACAACCAAATCAAACATCTCCACACTATATGTCTACGGCGAATGTTAATAGTAACCAAAGTGGTACTACGGGTGGTGGCATAAACCACATAACGACCACACCGATACCCTTAACAATGTCCTCGGCGACGGCAACAACACCATCAACAATCGTTGAGCATAAACATATAACTTCCACAAATccgacaacaacaacaccatcTACTGGGGATGTGGCTTCTAGTTCAGTTGTTGTACCCATGAGCACCACTTTAGTGTCAGCACATGATACACATTTGCtgcatcatcatcaccatcagcATCATGTACATCATCATGTAAATCAAGCTGCAGGCTCGCCTTTGTTGCTTAGTAGTGCTGGTCCTACAACTCCAACGCCTACAACGGGAACACTTTTAGCCAATAATTCACAAAATttGGGTAAATATTGGGTTGTGACAAACTTGTTTCAAGGAGCACCAGGTCAACCGGCTCAATATAACGAGGCAGGTATAACGCACACACAAACATCTATAGCAGGAGTGCCTTCATCAACATTAGTGCGTGCGATATCCACAACTGCCGGCAGCCCAACCGTGGTTACAAAAACCGAGGCAGTTTCTAGCAGTGCGGGAACGCTGCAAATACCACAAACCCAAATGTTATCTCAAGCGGGAATAGGACAACAACTGCCAAATGGCACAATTATAACAACCCAGgcacagcagcaacaacaacaacagcagcagcaaagaCATGTAGCAgaacatcagcagcagcaacaacaacagcagcagcaacaattgCATGTTCATGCCTTAAATAATGCAGAGGATAATcgccagcaacaacaacaacagcagcaacaacaaatgagccaacaacagcaacaacatgtTGCTGTTTTACAATCAAGCGATCAAGTCATAAAAGACGAAAAACCTTTCGCTTCCAATGGCAAAATAACTGCAACCAATCAACAGATCATTATGCAGCACATATCAACTGCAGCATCCTCTGGCAGTCCGGCTACCTCTGGTGCCACTACCATAACACTAGGTGCACCCAAAACAGAAATTAAAGATGATGGTAGCGTAGTCATGAGCGGAAAATTACATCCCGGCATTGAaatgtataaagtaaatatCGAAGATATATCTCAACTATTTACCTATCATGAGGTTTTTGGTAAACTACACGGTGATGTTATGAATCATCCCTTGGCAGCAGCCCATGCATCCTTACCAGCTGCTGCAAATAATAATATTGCTTCAGCGGTTTCAGCCACTACCACAAGTGCGGCTGAGGTTAATAATACAACTAGTGTAACTATGGTAACCAATAGTGTCCCTATAACAGAATCCACCAGTACAAGTACTGTAGGTTCCGGAGGTGTGGTTGCTACAACCAGTGCAGCGGCTAACTTAACAACAGCCATTGCTACAAACGCCAATACTGCAGTAACTGCTACTGCAACGACAGCTGGTGTAACTGCTGGAGGCCTGCTAATGCCGAAAATGGAAGGGGGTATTGCAAATGTAGACCAAAATACTGTTACTTTAGCGCCCGACGGCACTGTAGTGTCTACCGGGGAACACGTTTGCGACATATGCGGAAAAATGTTTGCCTTCCGCTATCAATTAATCGTTCATCGTCGTTACCACACTGAACGTAAACCTTTCAATTGTCAAGTCTGTGGTCAGGGCTTTTTTACCTCTCAGGATCTTACACGGCATGGCAAGATTCATATCGGTGGACCAATGTTTACTTGTTTGGTGTGTTTCAATGTTTTTGCCAACAATGCCTCTTTGGAGCGTCACATGAAGCGCCATTCGACGGACAAGCCATTTGCCTGCACGATATGTCAGAAAACATTTGCCCGCAAAGAACATTTGGAAAATCATTTCCGCTCGCACACTGGCGAAACTCCATTCCGGTGCCAATATTGTGCTAAAACATTTACACGCAAAGAGCACATGGTAAATCATGTGCGTAAGCACACGGGAGAGACTCCGCATCGTTGCGAAATCTGTAAGAAATCATTCACGCGCAAGGAGCACTATGTTAATCACTATATGTGGCACACTGgtCAAACACCTCATCAATGTGAAGTATGTGGTAAAAAGTATACACGTAAAGAACATTTAGCAAATCATATGCGTTCACATACAAATGATACACCATTTCGTTGCGAAATTTGTGGCAAAAGTTTTAGTCGTAAAGAGCATTTTACTAATCACATATTATGGCATAcaggAGAAACTCCTCATCGCTGTGATTTCTGTTCGAAAACTTTTACGCGTAAAGAACATTTATTGAATCATGTACGTCAACATACTGGGGAATCACCGCATCGTTGTACATACTGTATGAAAACGTTTACGCGCAAAGAACATTTAGTCAATCATATACGTCAACACACTGGCGAAACACCCTTTAAGTGCACTTATTGCACCAAAGCGTTCACGCGAAAAGATCACATGGTCAATCATGTGCGTCAGCATACCGGCGAATCGCCACACAAGTGTACATTCTGTACGAAAACGTTTACGCGCAAAGAGCACTTAACGAATCATGTGCGCCAGCATACTGGCGAGTCACCGCATCGTTGCAGCTATTGCAAAAAGACTTTTACACGGAAGGAGCATCTTACGAATCACATACGTTTGCACACAGGTGATTCGCCGCACAAGTGTGAATATTGTCAGAAAACCTTCACACGCAAGGAACATCTCAACAATCACATGCGTCAACATTCTAGTGATAATCCACATTGTTGCAATGTCTGCAATAAACCATTTACGCGCAAAGAACATTTGATAAATCACATGTCCCGCTGCCATACGGGTGATCGGCCATTTGCCTGTGAAACATGTGGAAAATCATTTCCGCTCAAGGGTAATTTACTCTTCCATCAACGTAGTCATACTAAGGGTCAAGAAATGGAGAGACCATTTACGTGCGAAAAATGCCccaaaacatttatttgcaaAGgaCATTTGGTATCCCACATGCGATCTCACTCCGGCGAGAAACCGCATGCTTGTACTTTATGCAGTAAAGCGTTTGTCGAAAGAGGAAATTTGAAGCGTCACATGAAAATGAATCACCCAAATGCTCCAATGCCACCACCCCCAGTGCCACATCCAGTTATACCAGCAGGAGTTTTGCCTCAAATTAAACAGGAAATTAAACCAGTTATCAGTGAATTAAATCCTCTACAAACTACAGCTCCAACCATGCATACCATACAACAAATAACAGCAGGAGCAGCGGCAAATACAGTGCAACTAACAACGGGTTTGACGCCTTTAGTGACGTCAACTATAACATCTCATGCTACACAAAAACAAGCGACACAGCCGCAAGCTCAAGTGCAGCAACAACAgttgcaacaacagcagcaacaacaacaagtagTAACAACAcaccaacaacagcagcagcaacaacaacaacagcagcagcagcaacaacaggtGACAGCACATCAACAAGTtttacaacagcagcaacaacaacaacatcagcaaaaTCAATTATTACAATTGTCTATACAGCAAGCAGCTGCGGCTGCAGCTCATCagcaaatacaacaacaacagcagcaacaacagcagcagcagcaacaacagcatcaaGAGCAACAACGccaacatcatcatcaacaacagcagcagcaacaacaacagcagacaCAACAGCAAGCCCATCATCAACAACAGCAAACAGCTTCAAATGTTACTGTCGTTGCTGCCGCTcaccaacagcagcaacaacaacagccatctcaacaacaacaaacacaaagtCAACAGCAACCACCACAAGTGCCAATCGCTTTAATACAAACCGATCAGGAAGCTTTGGCCCGTGCCACAATGCAACAATTGCAGCATATGCCCGCTAATGTTGAACAACATCCCGTTGTTTACTAA
Protein Sequence: MNTDNAIANATTPGESTTAATAATLSNTTTTTVSAVATSNGYDPQQQQNRHSPLQQQQQQQQQQSQLNESRHILTIVQQPNQTSPHYMSTANVNSNQSGTTGGGINHITTTPIPLTMSSATATTPSTIVEHKHITSTNPTTTTPSTGDVASSSVVVPMSTTLVSAHDTHLLHHHHHQHHVHHHVNQAAGSPLLLSSAGPTTPTPTTGTLLANNSQNLGKYWVVTNLFQGAPGQPAQYNEAGITHTQTSIAGVPSSTLVRAISTTAGSPTVVTKTEAVSSSAGTLQIPQTQMLSQAGIGQQLPNGTIITTQAQQQQQQQQQQRHVAEHQQQQQQQQQQQLHVHALNNAEDNRQQQQQQQQQQMSQQQQQHVAVLQSSDQVIKDEKPFASNGKITATNQQIIMQHISTAASSGSPATSGATTITLGAPKTEIKDDGSVVMSGKLHPGIEMYKVNIEDISQLFTYHEVFGKLHGDVMNHPLAAAHASLPAAANNNIASAVSATTTSAAEVNNTTSVTMVTNSVPITESTSTSTVGSGGVVATTSAAANLTTAIATNANTAVTATATTAGVTAGGLLMPKMEGGIANVDQNTVTLAPDGTVVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFTCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQEIKPVISELNPLQTTAPTMHTIQQITAGAAANTVQLTTGLTPLVTSTITSHATQKQATQPQAQVQQQQLQQQQQQQQVVTTHQQQQQQQQQQQQQQQQVTAHQQVLQQQQQQQHQQNQLLQLSIQQAAAAAAHQQIQQQQQQQQQQQQQQHQEQQRQHHHQQQQQQQQQQTQQQAHHQQQQTASNVTVVAAAHQQQQQQQPSQQQQTQSQQQPPQVPIALIQTDQEALARATMQQLQHMPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236968;
90% Identity: iTF_00922262;
80% Identity: -