Basic Information

Insect: Calliphora vicina
Gene Symbol: -
Assembly: GCA_958450345.1
Location: OY288235.1:41736547-41741582[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.25 2.1e+02 3.0 1.0 18 33 9 24 3 26 0.82

2 11 0.0068 5.6 8.0 1.4 3 31 23 52 21 64 0.85

3 11 0.27 2.2e+02 2.9 0.4 19 30 67 78 56 83 0.80

4 11 0.039 33 5.6 0.9 8 39 88 113 81 117 0.74

5 11 0.00051 0.43 11.6 1.5 18 44 123 146 119 146 0.91

6 11 2.2 1.8e+03 -0.0 0.4 32 44 175 187 167 187 0.85

7 11 0.035 29 5.8 0.7 18 30 193 205 190 210 0.84

8 11 0.06 50 5.0 0.4 5 30 209 235 206 244 0.79

9 11 0.013 11 7.1 1.0 9 38 243 267 238 267 0.84

10 11 0.085 70 4.5 0.5 13 38 274 296 270 301 0.77

11 11 0.00021 0.17 12.9 3.1 13 44 302 330 295 330 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.25	2.1e+02	3.0	1.0	18	33	9	24	3	26	0.82
2	11	0.0068	5.6	8.0	1.4	3	31	23	52	21	64	0.85
3	11	0.27	2.2e+02	2.9	0.4	19	30	67	78	56	83	0.80
4	11	0.039	33	5.6	0.9	8	39	88	113	81	117	0.74
5	11	0.00051	0.43	11.6	1.5	18	44	123	146	119	146	0.91
6	11	2.2	1.8e+03	-0.0	0.4	32	44	175	187	167	187	0.85
7	11	0.035	29	5.8	0.7	18	30	193	205	190	210	0.84
8	11	0.06	50	5.0	0.4	5	30	209	235	206	244	0.79
9	11	0.013	11	7.1	1.0	9	38	243	267	238	267	0.84
10	11	0.085	70	4.5	0.5	13	38	274	296	270	301	0.77
11	11	0.00021	0.17	12.9	3.1	13	44	302	330	295	330	0.87

Sequence Information

Coding Sequence: ATgcacaaatatacaaaatatcatGTTTGCGACGTTTGTGGtcaaaagtataaaaacaaagaatcATTCAAAAATCATTATGCCAAACATCAAGGTATCATTGAACCAGCCGCACAATGTTCCATATGCAATAGGTGGCTTAAAAACAAGCACAGTCTGAGGTTGCATCGTTTTGTTCATGAGAAACACACTACACCGTGTGACATATGTGGAAAGGTGTTTGATACCAAACATAGTCTGCGCAAACACAAGTCCTACTGGCACAAGTCCGACTTGAATTTACAGTGTAGCTTTTGTGAGAAAGTTTTTCGACAAGAGCGTAATCTGCAAGAGCACATGGCTACACACACTGGAGTGCAGCTTTATAAATGTCCACATTGTCAAAAAGAGTCACGTTCAAAATCGAATATGTACGTTCATATAAAGAGACAGCATCCAACTGAATGGTGGCAATCGAAAATGGAACGTTTAAATATCGATCCAAAAGCGGAGAATACTGAATTGCATCAACAATGTGCAACTATATATCGTTTGCGTAATCATATTGCATCCGTACACAATAATATATACCACCATATTTGTGACATTTGTGGAAAGAAATTCAAATCAAAGACATCCTTTCAAAAGCACTACGACGAACATCAAGGCATTGTTGAACCACCGGCTCAATGTACAATCTGTGGTGCATGGTTGAAAAATCAACACAGCCTACGTGTACATCATCAAACACATGAAGACACACAGTTTGCCTGCGATATTTGTGGTAAATTCTTCAAGACTAAAAAGAATTTGAGTCGTCACAAAGGCTATTGGCATCGGCGAGAACGCAATCTTTCGTGTAGCTATTGCGACAAAGTGTTTCGTGAAAAACGCAATCTTGACGAACACATGGCCATGCATACAGACACCAACCTGTATACATGTCCGCATTGTGGCAAAGAGTCAAGATCCAAATCAAATATGTATGTGCATATAAAACGTCAGCATCCAGACGAATGGTGGAAATCAAAACAGGAACGTTATAAATTAAAACCCGAAGAAGGTGGACAAGCAGGCGGAGAAGATGAGGTAAAAGATAAGTCACCAGTAATAGACGCACCAGTATCATCAACTCTAGCACAGGAATGTATTAATAcggaataa
Protein Sequence: MHKYTKYHVCDVCGQKYKNKESFKNHYAKHQGIIEPAAQCSICNRWLKNKHSLRLHRFVHEKHTTPCDICGKVFDTKHSLRKHKSYWHKSDLNLQCSFCEKVFRQERNLQEHMATHTGVQLYKCPHCQKESRSKSNMYVHIKRQHPTEWWQSKMERLNIDPKAENTELHQQCATIYRLRNHIASVHNNIYHHICDICGKKFKSKTSFQKHYDEHQGIVEPPAQCTICGAWLKNQHSLRVHHQTHEDTQFACDICGKFFKTKKNLSRHKGYWHRRERNLSCSYCDKVFREKRNLDEHMAMHTDTNLYTCPHCGKESRSKSNMYVHIKRQHPDEWWKSKQERYKLKPEEGGQAGGEDEVKDKSPVIDAPVSSTLAQECINTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259436;
90% Identity: iTF_00259436;
80% Identity: iTF_00259436;