Cvic008349.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- -
- Assembly
- GCA_958450345.1
- Location
- OY288233.1:18415077-18417017[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-08 0.0003 21.8 1.7 3 167 8 212 6 214 0.68
Sequence Information
- Coding Sequence
- ATGAACGAGTCCGAGCTTTGCATAAaaattcaaccaaaacaaaactttCATTTTCGGTATGAGAGTGACATAAAAAAACAAGGAAATACACACGGTGTATTGCAGGACCAACAAAAAGACAAATATCCTACAATTGAATTAAGTTTGCCAGCAAATAAAAGAAATAGTGAATTTTTCGTACTTTGTTCTTTGCATCGTTTTACAGACACCGTACCCAAAACTCTTTCGCCACATCTTCTAATGCGAAAAGGAGTAACGGAACTTAACTATgagtttatatttgaaaaaatgaaaACGGTTGAAGACAATCAAATGAAGCGAGTCTGGGAGTTAAGAGACTGTGTTATTGTGCGTATAAAAAGCGAGGAAAAAACCAAGGAAACCAAGAAAACCAAGAAAACCAAGGAATACAAGGAATACAATAATTCCTTTACCAATAAAAAGGCCGCATACGAACGTTTACAATTACCTTCGTTAGCTTTCGAAGAACTACTGGGAGAATTGAATTTAAATGATCCTAGTGAAGTAAAAGACAGTGGAATATTAAACGTCTGTCTGGGTTTTACGATATTCGAAAAAAAAGCTAAAGCAAAATACGATTTGTATACGAAAACAATTTATTCCTGTAACATCTATCATGGTGATGATTTAAGCATCCACAAACTTTGTAATACCAGAGGAAGTGTACTTGGAGGCACCGAAATAACCATCTTAATCAGACTTGAGTCAAATTTGCCACTTAATGttttcataaagaaaatcgATGAAAGAACCAGACAAACCGTATGGTCCACAACCGTAAGAAGTTTACAACTATTTGGTAATGCTGCCGTAACGTTTACAATGCCACCATATCAAGGACCCCCCAGTACGGATGAAGAAATTGAAGTATATATGTGTGTTATGGTGAAAAACACCACATACAAAAGCGATAAAGTCAAATTCATCTATATCAATGAAAGGCCACGTAAACGTTCAAGAGTAACAGAACAACACGATTACACTTCAGAACAAATAGCAAATGTATCAAGGCAATCGAGTGATGTACGTTGTGTATCATATGATCATGCAACTTTGCCGGAGTTCTCCTTCAACGCTGAGAAGAATATcgatattcaatttaaaattgataaattttttaaaactgcaAAGAATCCTAATCACATTGTATCATGTGAACATTTGTATTCCATATTTTACGATGCTTTAGAATCGGAGGAAGCATTCAAACATCTTTATAAAATGGCCAAGGATTCAAGTAACAATAAGCTGGTTGCAGATTTTCGCAATGAAAATGGTGAAAATCTCTTGCACATGGCGTGTCAAATGAACAAGTTCAAGAGAATACGTCCTTTAATTGGATTGGGATGTCATATCAATGAGCAGGACTACATCGGAAGAACACCGTTGCACGTCGCTCTGGCTAAACAACATATCGATTGTGTTGCGGAAATTCTGTTTATCTTCAACAACATTTCAAAGTACCCCAAAGAAGTGGAAACTGATTTAATGAAAATGATTAGGGCCTACAATCACGATGGCCATACAGTTTTACATGCCGCCATGCTCGGCCAATATAAAGAATTATGCGAAGCTATATTGATGTTCATGCATAAACACGATATGAATGTTTTGGACGTTGAAGTGTTGGGAAGTGGTGATTCCATTGCACATTTGGCTGTTAAACACAATCTTATGACGATTCGACctcttatagaaaaatatgtgtcAAATTATAAGatggttaaaaattatgctggCATAATGGTGCAGGAGTTGGAAGataaaatgttggaaaaattaaaaatctaa
- Protein Sequence
- MNESELCIKIQPKQNFHFRYESDIKKQGNTHGVLQDQQKDKYPTIELSLPANKRNSEFFVLCSLHRFTDTVPKTLSPHLLMRKGVTELNYEFIFEKMKTVEDNQMKRVWELRDCVIVRIKSEEKTKETKKTKKTKEYKEYNNSFTNKKAAYERLQLPSLAFEELLGELNLNDPSEVKDSGILNVCLGFTIFEKKAKAKYDLYTKTIYSCNIYHGDDLSIHKLCNTRGSVLGGTEITILIRLESNLPLNVFIKKIDERTRQTVWSTTVRSLQLFGNAAVTFTMPPYQGPPSTDEEIEVYMCVMVKNTTYKSDKVKFIYINERPRKRSRVTEQHDYTSEQIANVSRQSSDVRCVSYDHATLPEFSFNAEKNIDIQFKIDKFFKTAKNPNHIVSCEHLYSIFYDALESEEAFKHLYKMAKDSSNNKLVADFRNENGENLLHMACQMNKFKRIRPLIGLGCHINEQDYIGRTPLHVALAKQHIDCVAEILFIFNNISKYPKEVETDLMKMIRAYNHDGHTVLHAAMLGQYKELCEAILMFMHKHDMNVLDVEVLGSGDSIAHLAVKHNLMTIRPLIEKYVSNYKMVKNYAGIMVQELEDKMLEKLKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -