Csim028961.1
Basic Information
- Insect
- Calliopum simillimum
- Gene Symbol
- -
- Assembly
- GCA_951812925.1
- Location
- OX638371.1:30615053-30622764[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-11 2.9e-07 31.9 1.0 2 167 46 244 45 246 0.72 2 2 1.3 6.6e+03 -1.8 0.1 112 143 278 305 269 315 0.61
Sequence Information
- Coding Sequence
- aTGACACAATCAAACGATGAATACTCGTTTGCCAATGAAATGCTGGAAGAATTATTGAAGACAGCTAAACCGATTGAGGATTTTACGGAAGACGATTATAAGTACTTAGAAACTTTTCCTCAagcaattgaaatgaaaatgatcGAAGaaccacaaaaaacttttaaatttcgttttatATGCCAAACAAAACCAAAAGACGGCTGTTTGCGTGGTATAACAAGTAccaaacataaaattaaaacttatccAAAGATTGCGATACAATTTCCATCCAGCAATGTTGTTGATGGGCAGTTTTTTGTGCGTTGTACTTTACATCAGTTGCCGGAGATTGCTGGGGAATCTTCCTATATATCACCACATTTACTTTGGCGTCGTAGTAATGATGATCGTAAATTTTGCACTAGTGAAACTACGTTTTTTCCATTGAAAGAAGAAGAGCCAAATTTGTATACATTTACATTGGAAGATTTTGTTATCATAAGTACATCGAGAAAGGATTGGCAGAATGTAATTAtgctcaaattgaaaaatctaaaaaagcaAGATTTTGGTGAAGTTGATTTAAGTGAGGAAAaggaaaaggaaaaagaaaTGGAAAGAATGGTGCGTAAGCAGATACGCAAGCCACAAGACAAGGTACGCATATGTTTTGAGGTTTTCCAGGAACATAAAagcaataaaagttttataccCGTTGTTGGACCATTTTATTCCAGTAGTATTGCAAATGGAAAAGCTCCAAAAATCGACCGCATTTGTAACAATAGTGGTTTAATGAACGAAATAACCGAGATAACACTCTTGGTATCAGAAGTTAAGCCAAATGATAGAATACAAATTTCGGAAAGGAAAGAAGACATAAATGCTAATGaacagaacaacaacaacgaaaatgtTGAGTTGTTATTTACCAAAACTATTCCATTACAAGTTCCAATGTTAAACGATGTGAAAAATATACGAGTAATCACGTTTCAAATGCCAATATATGGAGGCCATAGATATAATTTAGAGCGTATTAGTTGTAAAATACAACTGGAACGAATGAGTGATGGAGCACTAAGTAATGTTCAGAATTTTGACtatattcaaaaattaagaCGACGTTAA
- Protein Sequence
- MTQSNDEYSFANEMLEELLKTAKPIEDFTEDDYKYLETFPQAIEMKMIEEPQKTFKFRFICQTKPKDGCLRGITSTKHKIKTYPKIAIQFPSSNVVDGQFFVRCTLHQLPEIAGESSYISPHLLWRRSNDDRKFCTSETTFFPLKEEEPNLYTFTLEDFVIISTSRKDWQNVIMLKLKNLKKQDFGEVDLSEEKEKEKEMERMVRKQIRKPQDKVRICFEVFQEHKSNKSFIPVVGPFYSSSIANGKAPKIDRICNNSGLMNEITEITLLVSEVKPNDRIQISERKEDINANEQNNNNENVELLFTKTIPLQVPMLNDVKNIRVITFQMPIYGGHRYNLERISCKIQLERMSDGALSNVQNFDYIQKLRRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -