Cvir020981.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_002245475.1
- Location
- NJDC01012440.1:85559-106656[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-14 6.2e-12 45.6 0.0 1 41 207 248 207 251 0.93 2 2 5e-18 1.2e-15 57.5 0.0 1 43 420 463 420 465 0.95
Sequence Information
- Coding Sequence
- ATGAAAAAATCCATTGTTCGCAaacgtattaataaaaatactattctaaattcaaatagcCCATTAACCGGTTCCCACGACCGCCATGTTGGCTCGTCCTCGGCCGCTATTGGTCGAGGCCGCGAGTTAGAATTAGAATGTGTAGACCCCACCATTTGGCGAGCGAGTCCGGCGTCAGAATCGGACAGCAGTTCGGTGTCCGGTGCGAAAAGTCCAGCAGGGCCGCAGTTGTTGCAACACCTGCTACAGCTGCAACTGCAGGGGCAGAATCCACAGGCTATAGCACAGGCGTACACGGAGATGTGTGTGCAGTTCCAGCAGATGATCGCGGCGCTGGCGGCGCTGGGGTCGGGGCTGATGCCGCCCGCCCTGTCCCAGGCGATGATGATGCAGCGGCTAGCCACCACCAGACCTCCAGTCGACAGATTATCAGAAGTTGGGGAAAAGGTTCCAGCGCCGAGTTCTTCCCCTACTACGGAACAACCTCTGGATCTGAGCGCAAAGTCTACCTCTAGCACAAGCGGCACCCCACCCCCTGATGTCAAGATCCAGGAGAACTCCAGATTAAAACGAGCAGTTCTTGAAGGTGCTGGAAATAGTGCTACAAGACGCGCTTATACCGAGGACGAACTTCAATCAGCACTGCGTGACATCCAGTCGGGAAGACTTGGCACTCGTCGCGCCGCTGTCGTCTATGGAATCCCACGATCCACTCTTCGGAATAAAGTTAACAAATTTGGGGTTACCTCCGAAGCTGGACCAGAGTCCGACCTTGATAGTGATTCAGAAAAACCTGACTCTCCGCAATCAGTAATTCTCAAAATACCAACATTCCCGCCGCCCGACGAGAAAAGTCCGTCGCCGGCTACACCAGTTACGAACCCAGTCACTCCTATCACGCCTATAACTCCACTTATAGCACTCCCCACGGCTTTCAAAGACCCCACGTCTCAACTTCTTCTACCTCCGACAGTTTATGCGGATCCTCCAACCAATCAACACATTTTCACGTCTTTAAATGACGTTATAGCTAAGAGTATCAGTCAAAAGTTCCAACAACCCTTAGATAGGCCTCCACAACCATCAGATCTTCCCTTCATGAGAGCACCAGATAGACACGTTTCGGTTATTAAAACGCCACCAGATAATCAGAGAAATTATGCGATGCCTAGTAATTCGAAAACGACGAATAATAATGGGCAACCAGTGGCGGGAGGGAAGGGTACGAGACCAAAGCGAGGAAAATACAGGAACTACGATCGGGACAGTCTAGTGGAAGCCGTGAAAGCGGTTCAGAGGGGTGAAATGTCAGTTCATCGGGCCGGTTCCTATTATGGTGTGCCGCACTCGACGCTGGAGTACAAAGTTAAGGAGCGGCATCTAATGCGGCCGAGAAAACGTGAACCCAAACCCCAACAGGATAACATTATGAAGCCGCAACCTCCAAAGCCACCGCCGAAACCCCCCACTAAGTTCACGAATGGCTTGAACGGTCCCGAACCGAGTTACCCGCCGAGTTATCCCTTCTGGGCGGGAGGGGGATTCGCCCCTCCGCCGGCGCCCGATTTGTACGCGTCCCACATGATGCGAAGGCTGCGGGAAGAAGCTCCGCCGCCGGCGAACGGTTCGTTCCTGGAAGGGATCATCCGGTCGAGTCTCGAGCGGCCGGGCGCCACGCTGCTGCAGCGGCTGAGCGGCGGCGCGTCCCCGCCCAGCGGCGTGCGGCGGCGCCTAGACGGCGAGGCGGGCGACGAGCCGACGGCGCGCCGGGCGCGACTGGGCGCCGACCACGCGCTGGCGGCGGAGATGCGGGAGGCGGTGCAGCGGCTGCGGGCGCGGAACGGGACTCCCACGCCGCCGCCGGAGCCCGAGCGCTCCGCCTAG
- Protein Sequence
- MKKSIVRKRINKNTILNSNSPLTGSHDRHVGSSSAAIGRGRELELECVDPTIWRASPASESDSSSVSGAKSPAGPQLLQHLLQLQLQGQNPQAIAQAYTEMCVQFQQMIAALAALGSGLMPPALSQAMMMQRLATTRPPVDRLSEVGEKVPAPSSSPTTEQPLDLSAKSTSSTSGTPPPDVKIQENSRLKRAVLEGAGNSATRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGVTSEAGPESDLDSDSEKPDSPQSVILKIPTFPPPDEKSPSPATPVTNPVTPITPITPLIALPTAFKDPTSQLLLPPTVYADPPTNQHIFTSLNDVIAKSISQKFQQPLDRPPQPSDLPFMRAPDRHVSVIKTPPDNQRNYAMPSNSKTTNNNGQPVAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDNIMKPQPPKPPPKPPTKFTNGLNGPEPSYPPSYPFWAGGGFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGATLLQRLSGGASPPSGVRRRLDGEAGDEPTARRARLGADHALAAEMREAVQRLRARNGTPTPPPEPERSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212348;
- 90% Identity
- iTF_00255734;
- 80% Identity
- -