Cnem022934.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_002245505.1
- Location
- NJDD01003320.1:57195-85438[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-14 5.4e-12 45.8 0.0 1 41 208 249 208 252 0.93 2 2 6.6e-18 1.5e-15 57.2 0.0 1 42 421 463 421 465 0.95
Sequence Information
- Coding Sequence
- ATGAAAAAATCCATTGTTCGCAaacgtattaataaaaatactattctaaattcaaatagcCCATTAACCGGTTCCCACGACCGCCATGTTGGCTCGTCCTCGGCCGCTATTGGTCGAGGCCGCGAGTTAGAATTAGAATGTGTAGACCCCACCATTTGGCGAGCGAGTCCGGCGTCAGAATCGGACAGCAGTTCGGTGTCCGGCGCGAAAAGTCCAGCAGGGCCTCAGCTGTTGCAACACCTGCTACAGCTGCAACTGCAGGGGCAGAATCCACAGGCTATAGCACAGCAGGCGTACACGGAGATGTGTGTGCAGTTCCAGCAGATGATCGCGGCGCTGGCGGCGCTGGGTTCGGGGCTGATGCCGCCCGCCCTGTCCCAGGCGATGATGATGCAGCGGCTAGCAACCACCAGACCTCCAGTCGACAGATTATCAGAAGTTGGGGAAAAGGTTCCAGCGCCGAGTTCTTCCCCTACTACGGAGCAACCTCTGGATCTGAGCGCAAAGTCTACCTCTAGCACAAGCGGCACCCCACCCCCTGATGTCAAGATCCAGGAGAACTCCAGATTAAAACGAGCAGTTCTTGAAGGTGCAGGTAATAGTGCAACAAGACGCGCTTATACCGAGGACGAACTTCAATCAGCACTGCGTGACATCCAGTCGGGAAGACTTGGAACTCGTCGCGCCGCTGTCGTCTATGGAATCCCACGATCCACGCTGCGGAATAAAGTCAACAAATTTGGGGTCACCTCAGAAGCTGGCCCAGAGTCCGACCTTGATAGTGATTCAGAAAAACCTGATTCTCCGCAATCAGTAATTCTCAAAATACCAACATTCCCGCCGCCCGACGAGAAAAGTCCGTCGCCGGCTACACCAGTTACAAACCCAGTCACTCCTATCACGCCTATAACTCCGCTTATAGCACTACCCACGGCTTTCAAAGACCCTACGTCTCAACTTCTTCTACCTCCGTCAGTTTATGCGGATCCTCCGACCAATCAACACATTTTTACGTCTTTAAATGACGTTATAGCTAAGAGTATCAGTCAAAAGTTCCAACAACCCTTAGATAGGCCTCCACAACCATCAGATCTTCCCTTCATGAGAGCACCAGATAGACACGTTTCGGTTATTAAAACGCCACCAGATAATCAGAGAAATTATGCGATGCCTAGCAATTCGAAAACCGCAAATAATAATGGACAACCAGTGGCGGGGGGGAAGGGCACGAGACCCAAACGAGGAAAATACAGGAATTACGATCGGGACAGTCTAGTGGAAGCCGTGAAAGCGGTTCAGAGGGGTGAAATGTCAGTTCATCGGGCTGGTTCCTATTATGGTGTGCCGCACTCGACGCTGGAGTACAAAGTTAAGGAGCGGCACCTAATGNNNNNNNNNNNGCCGAGAAAACGTGAACCGAAACCCCAACAGGATACCGTTATGAAGCCGCAACCTCCAAAGCCACCTCCGAAACCCCCCACTAAGTTCACGAATGGCTTGAACGGTCCCGAACCGAGTTATCCGCCGAGTTATCCCTTCTGGGCGGGAGGGGGTTTCGCCCCTCCGCCGGCGCCCGACTTGTACGCGTCCCACATGATGCGGAGGCTGCGGGAGGAAGCTCCGCCGCCGGCGAACGGTATTACGAGTGCGGTTTGCGTGTCGCCCTGCGGCCTGCACTAG
- Protein Sequence
- MKKSIVRKRINKNTILNSNSPLTGSHDRHVGSSSAAIGRGRELELECVDPTIWRASPASESDSSSVSGAKSPAGPQLLQHLLQLQLQGQNPQAIAQQAYTEMCVQFQQMIAALAALGSGLMPPALSQAMMMQRLATTRPPVDRLSEVGEKVPAPSSSPTTEQPLDLSAKSTSSTSGTPPPDVKIQENSRLKRAVLEGAGNSATRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGVTSEAGPESDLDSDSEKPDSPQSVILKIPTFPPPDEKSPSPATPVTNPVTPITPITPLIALPTAFKDPTSQLLLPPSVYADPPTNQHIFTSLNDVIAKSISQKFQQPLDRPPQPSDLPFMRAPDRHVSVIKTPPDNQRNYAMPSNSKTANNNGQPVAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMXXXXPRKREPKPQQDTVMKPQPPKPPPKPPTKFTNGLNGPEPSYPPSYPFWAGGGFAPPPAPDLYASHMMRRLREEAPPPANGITSAVCVSPCGLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212348;
- 90% Identity
- iTF_00256766;
- 80% Identity
- -