Cvir007174.1
Basic Information
- Insect
- Calephelis virginiensis
- Gene Symbol
- Su(H)
- Assembly
- GCA_002245475.1
- Location
- NJDC01002376.1:107559-108437[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 1.9e+04 -3.7 0.0 26 43 188 205 179 210 0.40 2 2 4.5e-32 6.3e-28 98.0 0.0 1 66 224 289 224 291 0.96
Sequence Information
- Coding Sequence
- ATGCCTCACCAGTATGGCGCGGGTGCAGGCGGCATTGGTGGAGGTCCACCGTCGCCTCCTCCACAACACGGCGCTCTGTACCCGCGCTATGCTGCTGCTGCCGGTCCTGGCGCGGGCGCCTATCGGCCTGAAGAACGCCGCCTTACCCGCGAGGCCATGGAGCGCTATCTTCGTGATCGCTCTGACATGGTAGTAGTCATATTACACGCTAAAGTTGCACAAAAATCTTATGGTAACGAAAAGAGATTCTTCTGTCCACCTccttgcatttatttatttggagaTGGCTGGCGGCTGAGGCGTGAAAGAATGCTCCGAGAAGGAGAAACTGAGCAGGCGTCACAATTATGTGCCTTTATTGGCATTGGCAACTCCGACCAAGATATGCAGCAGCTAGATCTAAATAATGGGAAGCAGTACTGTGCAGCTAAGACTTTGTACATATCAGATTCagataaaagaaaacattttatgttatctGTAAAGATGTTCTATGGGAATGGTCATGacataggtatatttaataGTAAGAGAATTAAAGTTATATCTAAGCCTTCTAAAAAAAAGCAGTCATTGAAGAATGCCGATTTATGTATAGCTAGTGGTACCAAAGTGGCTTTATTTAACAGATTAAGGTCACAGACTGTATCTACGAGGTACCTTCATGTTGAGAATGGGAATTTTCATGCATCATCAACACAATGGGGTGCTTTTACGATACATTTATTGGACGACAATGAGAGTGAATCTGAAGAGTTTGCAGTGAAGGATGGGTATGTGCACTATGGGTCAACTGTCAAACTGGTGTGTTCAGTTACAGGAATGGCTTTACCCAGGCTCATAATACGCAAGGTAAACATCTTTCAAATATTaccatag
- Protein Sequence
- MPHQYGAGAGGIGGGPPSPPPQHGALYPRYAAAAGPGAGAYRPEERRLTREAMERYLRDRSDMVVVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRRERMLREGETEQASQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGIFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVKDGYVHYGSTVKLVCSVTGMALPRLIIRKVNIFQILP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00687680;
- 90% Identity
- iTF_00148245;
- 80% Identity
- -