Basic Information

Insect: Calephelis nemesis
Gene Symbol: -
Assembly: GCA_002245505.1
Location: NJDD01001089.1:851003-870545[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0018 0.15 13.2 0.1 2 23 139 161 138 161 0.95

2 17 0.98 82 4.6 0.1 3 23 398 419 396 419 0.95

3 17 0.0025 0.21 12.7 0.1 1 20 427 446 427 448 0.95

4 17 0.0098 0.82 10.9 0.9 2 23 458 479 457 479 0.94

5 17 0.42 36 5.7 3.0 1 23 527 550 527 550 0.90

6 17 1.4 1.2e+02 4.1 0.6 3 23 592 616 590 616 0.85

7 17 0.048 4 8.7 0.7 2 23 628 650 627 650 0.93

8 17 1.4 1.2e+02 4.1 2.5 1 23 655 678 655 678 0.94

9 17 3.8e-05 0.0032 18.4 1.8 1 23 684 706 684 706 0.97

10 17 4.6e-06 0.00039 21.3 0.8 1 23 713 735 713 735 0.98

11 17 8.9e-05 0.0075 17.3 2.3 1 23 740 762 740 762 0.96

12 17 0.0007 0.059 14.5 1.7 1 23 768 790 768 790 0.98

13 17 2.5e-06 0.00021 22.2 1.5 1 23 796 818 796 818 0.97

14 17 0.00069 0.058 14.5 2.5 2 23 825 846 825 846 0.97

15 17 0.00036 0.031 15.4 0.6 2 23 854 876 853 876 0.97

16 17 3.6e-05 0.003 18.5 0.6 1 23 881 903 881 903 0.98

17 17 0.13 11 7.3 4.1 1 23 909 932 909 932 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0018	0.15	13.2	0.1	2	23	139	161	138	161	0.95
2	17	0.98	82	4.6	0.1	3	23	398	419	396	419	0.95
3	17	0.0025	0.21	12.7	0.1	1	20	427	446	427	448	0.95
4	17	0.0098	0.82	10.9	0.9	2	23	458	479	457	479	0.94
5	17	0.42	36	5.7	3.0	1	23	527	550	527	550	0.90
6	17	1.4	1.2e+02	4.1	0.6	3	23	592	616	590	616	0.85
7	17	0.048	4	8.7	0.7	2	23	628	650	627	650	0.93
8	17	1.4	1.2e+02	4.1	2.5	1	23	655	678	655	678	0.94
9	17	3.8e-05	0.0032	18.4	1.8	1	23	684	706	684	706	0.97
10	17	4.6e-06	0.00039	21.3	0.8	1	23	713	735	713	735	0.98
11	17	8.9e-05	0.0075	17.3	2.3	1	23	740	762	740	762	0.96
12	17	0.0007	0.059	14.5	1.7	1	23	768	790	768	790	0.98
13	17	2.5e-06	0.00021	22.2	1.5	1	23	796	818	796	818	0.97
14	17	0.00069	0.058	14.5	2.5	2	23	825	846	825	846	0.97
15	17	0.00036	0.031	15.4	0.6	2	23	854	876	853	876	0.97
16	17	3.6e-05	0.003	18.5	0.6	1	23	881	903	881	903	0.98
17	17	0.13	11	7.3	4.1	1	23	909	932	909	932	0.97

Sequence Information

Coding Sequence: atgtcatctGATGATACCGACGATGAACCCCTTTCGGTATTAGCCGCTTCCAAAAGATTAAACCACGAAGACTATGATGAAGAGACTAGAGGAAGTGATGATGATGAAGCACTAACGAAAAAGAAAAAGGAACCGCTGACAAGAAACTTAAGTTTGACgctaaaaataaacagaaaattgaAACAGTTAACACAACCCGTTATCGAAAGACCTCTCGATGTTTGGCTGTATCTTAAAGATTTAAATCCCACTGGACCTTACACTTGCTTATTATGTCCGGATTGGTTTATAAACCGCTCAAAAATGGTGATGCATTAcgttttaaatcataaaaaggACTTCTGTGGAATTTGTAGatACTTTGTACCAGATAGAGAAGCATGGATAGCACACGAGAGCTTCCATACACCGTGGCCCTGCTCCCAGTGTGTGGAGACTTTTCCTACTGAAACATTATTACGTAGTCACCTGAGAAATGTACATAATCTAGTTCACTGTAGACTATGCCATTTCCGTGTCCCTGCAGATGAACAATATGACtctcatttatttcaaaaacacaaTGTCACAAATATGTCttttaaagaagaagaaagtcTTTGGGAATTTGAATCTGAAGATGCACAAAAGTTTACATGTTTGCTCTGTGCCAAAGTAGATGTAGCTCTTCCCActtttttcaatcactttatggGATTGCACCATTTTACATTGAAATGCTTAACAGGTCTTGTATCTGGCAAGGATCCTCCATTCCTAGTTACAGGTGCTGAGCTCAGTTCTAAGTTTATAGAAGAAcagctaaaaaataataagatacgCTTTGGCTATGTGGATTTAGAACAAAAGACATTTGAATCTGATAATCAGTGTAGCATGGACATTCAAAATGAATCTATGCCTTACATAAAAGAGGAAGTTCAGGAGGCAAGTGACGAAGAAGTTGATGAAATGGAGAAAACTGAAGAAGTTAATAAAGAAACAGAGTCAAGTAATAATGTTGGATATGTCAAAATTGACTATAGAGGGGTGGAGGACTTTGATATTACACTAACCGAGATAATAGTACTTGAACCAAGTTATGTTGACTATGTAAATAACTATTTACAAGATCTCGAATCTAATAAAGTTCCCGAAAATTCTAATGTGAATTATTTGCAAATGAATCCGGAACTTGCAGAAGGTTTATTTTGTGCACTTTGCTCCGTGAAATATGACACTGTTACAGCATTCATTGCACATATCAATAAAATGCATAACATGAAAGTTGTGCCTCAATTTACTTGCAGAGTCTGTGCTACAACATTTGACACTCAGGCAGAACTTAAAAGTCACATAACAGAAGAACTGGGGGATTTTGAAGACTTGTGGATTTGCCAGTTTTGTGACAAAGAGTTTGATAACAGGGAAACAACCAGGAAACACTTAACAGAGCATTGGAATACATTAGAATATGATAATTGTTTTAGTCCCCATCttggatttaaatgtaaattctgTCCAAGTCTATTTTGGAATGAACCAGAGAGAGAACATCATCAAGTTAAAAATCATATGAGCAAATATATTGATCAGTTTTACAAGTGCTGTATTTGCTTACAAGCTTATAGTGATAAGGTTTGGTTTGTTCACCATTATGTTGAGAAGCATTCAGAACAAGGCCAAAAATACTCCTACTTATTAAAATGCTGCATTTGTTGTATAGTACTTACAAACATAGATGAAATGAGAGGTCACTTTGAACAATGTCATCCGGAGGCAAAGAAACTATACTGTTCCTATGATACTTGCAATTACAAGCCTCTAAGTCAACGCAAGTCTTTGAAACTACATGTGAAGACAATTCACGGTCAAGTACAGACGAAAATAGAAAAGCCGGTGAGCTGCAACATGTGTGGTCGTGAGTTTGCCAGTACACGTGCATGCACAGCGCATATGTCGCAAGTGCACGGCCCTGGCAAGTTCAAGTGCAAACTTTGTCGAGAAGTGCTCAACACACTTGACGAGAGAAAACTTCACTACCTCCTTTGCCATCCTGGACGGCATCCGTTCGAGTGTTCTGAGTGTGGCAAGTCCTTCCAGTACAAGTCTTCCCTGTACATGCACAAACAAGAGCATATGCCCAACAGGCAGAGCTACACTTGTTCTTATTGTGGAAAAATATTTGCGAAAAAAGATTCATTCCGCGAGCACGTCCAGATCCACGAAGGTCCTCGTCACGCGTGCTCGTACTGCCCGATGCGGTTCGTGCAACGCTCCAACATGCTCCGTCACGAGCGCCGCCATACCGGCGAGCGGCCGTACCACTGCCCCGAGTGTCCGCGGACATTCGCCGACAAGGGCGCTTGCAATGCACACTCCAGAACACACTCCAAAGCGACATCATTTGCGTGCCTGTACTGTGGACAGACGTTCGTACAGAAATCTAAGCTGACATATCATATACGGAAACACACGGGTGAAAATTTGGAATCATGTACGGTTTGCTCGAAATTGTTCACTAGTGCGTGTTCTTTACGCGAACACATGAAGATACATGTCGAGAAAAGACAAGTTGTCCAGTGCCCTCTATGTGATAAGAAATACCAAGACGAACGTTATATGCTACGCCACTTGAGGACATCACACACAAAAACTCAGTTCAGCTGTCCGATATGTCAGAAAGTGGTCACCAGCTCCACAGGACTTAGGCACCACGTGATCACACATAGCTCTCTAAACACCTTCAGGTGCAAATGCTGTCCCAAATCCTATGCAGTGAAGAGGacaataataaaacatctaCGGAAACGGCACAACCTCAACAATACAGAAGTCAATGTCAAAGACTACTACACCCGTCTAGACCCAAGAGAATGCAAACTGGACCTAGACGAAGAAACAATGAACAGTATTTTCGGCCCACCGAAAAAGAAACCCCCGGAAATATTACTTGGTGATTTTGTGTCATTCCACAATATGAATATCCAAAGAGCttgggataaaaataaaaaccttgaGAAGGAAAGTCctaagaaaaagagaaaaagaaaaGCTAAACCTAAAAAAGACGTTAATAAAGGCAACAAGGAGAGCGCACAAGACAGTATTAAAGGAAGTGATAAAGAAGGTGCTGTGGATGAAGtggaaaaaattgttttgaagcAAGAAGTCCTAACAGATGAAGATGAATTGGAACCTACAGAttttgttagtgttaaaattgaACCCATGGACTATGACGGTGATGGAGATCAGTGTTAG
Protein Sequence: MSSDDTDDEPLSVLAASKRLNHEDYDEETRGSDDDEALTKKKKEPLTRNLSLTLKINRKLKQLTQPVIERPLDVWLYLKDLNPTGPYTCLLCPDWFINRSKMVMHYVLNHKKDFCGICRYFVPDREAWIAHESFHTPWPCSQCVETFPTETLLRSHLRNVHNLVHCRLCHFRVPADEQYDSHLFQKHNVTNMSFKEEESLWEFESEDAQKFTCLLCAKVDVALPTFFNHFMGLHHFTLKCLTGLVSGKDPPFLVTGAELSSKFIEEQLKNNKIRFGYVDLEQKTFESDNQCSMDIQNESMPYIKEEVQEASDEEVDEMEKTEEVNKETESSNNVGYVKIDYRGVEDFDITLTEIIVLEPSYVDYVNNYLQDLESNKVPENSNVNYLQMNPELAEGLFCALCSVKYDTVTAFIAHINKMHNMKVVPQFTCRVCATTFDTQAELKSHITEELGDFEDLWICQFCDKEFDNRETTRKHLTEHWNTLEYDNCFSPHLGFKCKFCPSLFWNEPEREHHQVKNHMSKYIDQFYKCCICLQAYSDKVWFVHHYVEKHSEQGQKYSYLLKCCICCIVLTNIDEMRGHFEQCHPEAKKLYCSYDTCNYKPLSQRKSLKLHVKTIHGQVQTKIEKPVSCNMCGREFASTRACTAHMSQVHGPGKFKCKLCREVLNTLDERKLHYLLCHPGRHPFECSECGKSFQYKSSLYMHKQEHMPNRQSYTCSYCGKIFAKKDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYHCPECPRTFADKGACNAHSRTHSKATSFACLYCGQTFVQKSKLTYHIRKHTGENLESCTVCSKLFTSACSLREHMKIHVEKRQVVQCPLCDKKYQDERYMLRHLRTSHTKTQFSCPICQKVVTSSTGLRHHVITHSSLNTFRCKCCPKSYAVKRTIIKHLRKRHNLNNTEVNVKDYYTRLDPRECKLDLDEETMNSIFGPPKKKPPEILLGDFVSFHNMNIQRAWDKNKNLEKESPKKKRKRKAKPKKDVNKGNKESAQDSIKGSDKEGAVDEVEKIVLKQEVLTDEDELEPTDFVSVKIEPMDYDGDGDQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00257190;
90% Identity: iTF_00257190;
80% Identity: -