Cnem001211.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- ZBTB47
- Assembly
- GCA_002245505.1
- Location
- NJDD01004356.1:35855-39086[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.059 4.9 8.4 1.9 1 23 33 56 33 56 0.95 2 23 3 2.5e+02 3.0 0.0 2 23 82 104 81 104 0.93 3 23 0.0016 0.14 13.3 0.9 1 23 126 148 126 148 0.98 4 23 0.042 3.5 8.9 2.1 1 23 152 174 152 174 0.97 5 23 0.066 5.5 8.3 1.8 1 23 178 201 178 201 0.96 6 23 9.8 8.2e+02 1.4 4.3 2 23 208 230 207 230 0.92 7 23 0.035 2.9 9.1 0.1 2 23 238 260 237 260 0.94 8 23 0.00094 0.079 14.1 2.5 1 23 266 288 266 288 0.98 9 23 0.00031 0.026 15.6 1.6 1 20 294 313 294 315 0.95 10 23 0.03 2.5 9.3 1.1 1 23 351 373 351 373 0.96 11 23 0.012 1 10.6 0.3 2 23 445 467 444 467 0.95 12 23 0.00065 0.055 14.6 2.1 2 23 473 495 472 495 0.95 13 23 0.0027 0.23 12.6 0.9 1 23 500 523 500 523 0.94 14 23 0.18 15 6.9 0.8 2 23 526 548 525 548 0.95 15 23 0.0032 0.27 12.4 1.3 2 22 555 575 554 575 0.95 16 23 0.23 19 6.5 0.9 1 23 633 656 633 656 0.93 17 23 0.23 19 6.5 0.1 3 23 730 752 728 752 0.93 18 23 0.0006 0.05 14.7 0.6 3 20 759 776 757 780 0.90 19 23 0.02 1.7 9.9 0.4 1 23 785 808 785 808 0.97 20 23 0.00045 0.038 15.1 0.2 2 23 814 836 814 836 0.94 21 23 4.5e-05 0.0037 18.2 4.7 1 23 840 863 840 863 0.97 22 23 0.00019 0.016 16.2 0.6 2 23 870 891 869 891 0.96 23 23 0.014 1.2 10.4 4.2 1 23 897 919 897 919 0.97
Sequence Information
- Coding Sequence
- ATgacaacaacaaaaagaaatcgcCTTATGAAAAGAAACGCAATAATTATTCTTGAAACTTCCACAGTGATTCCTTTCAAATGGCACCGCCATAGCTACCTTTGTTTCTTTTGCCATCAGGCTTTTAAAGAATTGAAACCCTTGAAAGAACACACAAGAGTAGATCATGAGAAATCTAGCATTAAATCtgctgttttatatttaaagagaGATGAAAAAGTGAAAATTGATATATCAGAAACAGTGTGTAGAGAGTGTGATGTTAGTTTAATAGATGTAAGAGCTATTATAAATCATATTAAGGAAAGACACAACAAAGTGCTTGCTGAACATTGTGGTTATGGTGTTGTGCCTTACAAATTGTTTGGTGATAAGTTTCAATGTGCGGAATGCGAGAAGGAATtccaatattttatcaaattaaatcaaCATATGAACGAACATTTTGGGAATTATGTTTGCGAGTCGTGCGGGAAATCGTTTTTGAGCCAAGATCGTTTAAGGTGTCATTTACTGACACACGGTTCTGGGTTCCATTGTAACATATGCTCTGAAAATTTTGACTCTCTAACCCAAAAAACCAATCATGAGTTGACAGTCCACAATAAGAGTCGCTCTATAAGATGTCTCTTTTGTTCTGAAAGCTTTCATACTTATATATCGCGGAAGCGTCATCATAGTTTGGTTCATAATGTTGAACATACATTAATAAAGTGTCCTGTTTGCGCTAAATCGTTTCAAATTCTAAGTAAAATGTGGACTCATTTGAAAGAAGTTCATGTTCGGGAAAAAAAGTTCTCATGTTCAATGTGCGATCAAAAGTTTTTCTCGAAGTCTCGTGTGCAAAAGcacattattaaacatttaggAGAGAGAATCCACCAATGTGATGTGTGCAAAAGATCGTATGCAAGAAAACAGACTTTGAAAGATCATATGCAtgcgaaagaaagaaagaaaagcgGCGAATCATCATCAATGCGAAGAAGAAAAAATCTTCAATTATTATTCAACAACACAACAATAATACCTTTCAAATGGCGTGGAAGATATTTATGTTTCTATTGTAGCAAAGACATCGCAGAGTACTCTGAATTAAGGAAACATACGAAATCACATGGAAAATGTTCTACAAAGGATCATTCTCTAAAGGTTTTAAAAGGGGGACAAAATatggaaataaaaatagatatatctGTAATAGGTTGTGAAATATGTAACGATGAATTTGCAGTTTTCGATGAAGTGATTgatcatttacatttaaaacataagTTGGAATATAACAAAGATGTTGATATGGCGACAGAAGAATACAGACTTGTAGATTTAAGTTGTGTCATATGCCAAGAGAAATTTACCTATTTCGGTTATTTAGTATCACACGTTAACAGTAATCACCCCAAAAATTGTTTGATTTGTGATAAATGTGAGCAGAAATTTAATAAGAAACGAGATTTGTTTTCTCATATGAAGAATTATCACAGAGAAGGTGGTTACACATGTGATGTCTGTCCTCAGAGTTTCAGTTCTTTGAACATATTGAGGAAGCATAGAAGTAATCGTCATTTTTCAAGATGCAATATATGTCATTTAAAGTTACCTTCAgcagtattaaaacaaaaacatatggATATGGAACATCCTGATGATGGATCTTTACAATGTGATATATGTTAtaaagattttcacacaaaacaaGGTTTGAAGATGCATTTGAGGAAATGCAAAGGTGTCCTATTTGACATTGCATACAAAAAGGAGGATTTAGATGTAATGGACTCTGATTTGAATTTCGAAGCAACCAAACGCCCAAGCGTTAAACAAATCAGGGAAAATATTGTGACAGTTATCAATATGTCAACCGCTATTCCAttcaatttctataaaaataagtttaattgctTCTATTGTTCCAAAGATTTTCTTGATTCTGATTCTATGAAAGAGCATACGGTCATGGAACATCCAACATGTaatgttaaagaaaaatgtattagGAAGTGTAGAGAATCGGTCGCATGCGTTAAAATTGACATTTCGTCACTAGCTTGTAAACTTTGCTTTGAACCTATGAGTGATTTAGATATATTGTTAGatcatttaatacaaaaacacgAAGCTAATTATGATAAAACCATTACTACTTGCTTGCAACCGTACAGACTGGTGAAGGAACATATGGCATGTCCGAATTGTCCCGgtgaaatatttagattttttggcACTCTACTTAAACATATGAACAATCAACATACgaataataatatcatttgtGTTTATTGCGGTCAAACGTTTAGACGTGATCAAAACTTGCGGGTGCATATTTGGAGGCATCATAGGGATGGacgatttaaatgtaatatttgcgATGCTGAGTGCAATATACCATCTAGATTGTACATGCATATGGCAAAAGCGCATGGTGTGAAAGCGGCTAAATGTCCAAAATGTCCAGAAACATTCGCCACTCAATATCTAAGACAGAAACATTTGATAGAGGCCCACGATTCTGGTCACAAATGTTCGTATTGTGGCAAACTGTTCACTCGGAATTCATTTATGAGAGATCATATAAGACGTACACATTTGAAAGAGAAAAACGTAGAATGTTCTATTTGCAATATGAAgttctttaataatatattattgagGCGGCATATGGTGAAGCATAGTGGAGAGAAGAATTTCCACTGTGATTTTTGTGGTGAAAGATTTTATTGGAGAAAAAGTCTAAGAACTCACATGAGTAGACACGGCAAACATAACATATGA
- Protein Sequence
- MTTTKRNRLMKRNAIIILETSTVIPFKWHRHSYLCFFCHQAFKELKPLKEHTRVDHEKSSIKSAVLYLKRDEKVKIDISETVCRECDVSLIDVRAIINHIKERHNKVLAEHCGYGVVPYKLFGDKFQCAECEKEFQYFIKLNQHMNEHFGNYVCESCGKSFLSQDRLRCHLLTHGSGFHCNICSENFDSLTQKTNHELTVHNKSRSIRCLFCSESFHTYISRKRHHSLVHNVEHTLIKCPVCAKSFQILSKMWTHLKEVHVREKKFSCSMCDQKFFSKSRVQKHIIKHLGERIHQCDVCKRSYARKQTLKDHMHAKERKKSGESSSMRRRKNLQLLFNNTTIIPFKWRGRYLCFYCSKDIAEYSELRKHTKSHGKCSTKDHSLKVLKGGQNMEIKIDISVIGCEICNDEFAVFDEVIDHLHLKHKLEYNKDVDMATEEYRLVDLSCVICQEKFTYFGYLVSHVNSNHPKNCLICDKCEQKFNKKRDLFSHMKNYHREGGYTCDVCPQSFSSLNILRKHRSNRHFSRCNICHLKLPSAVLKQKHMDMEHPDDGSLQCDICYKDFHTKQGLKMHLRKCKGVLFDIAYKKEDLDVMDSDLNFEATKRPSVKQIRENIVTVINMSTAIPFNFYKNKFNCFYCSKDFLDSDSMKEHTVMEHPTCNVKEKCIRKCRESVACVKIDISSLACKLCFEPMSDLDILLDHLIQKHEANYDKTITTCLQPYRLVKEHMACPNCPGEIFRFFGTLLKHMNNQHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICDAECNIPSRLYMHMAKAHGVKAAKCPKCPETFATQYLRQKHLIEAHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDFCGERFYWRKSLRTHMSRHGKHNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00160047;
- 90% Identity
- -
- 80% Identity
- -