Cnem016155.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- retn
- Assembly
- GCA_002245505.1
- Location
- NJDD01002641.1:353453-361261[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-16 2.9e-12 47.4 0.1 29 89 4 62 1 62 0.93
Sequence Information
- Coding Sequence
- ATGGCTAAATCTGTACTGGACCTCTACGAACTTTATAATTTGGTGGTAGCCCGCCAGGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAAGTCATCAGGGGACTGAAGCTGCCATCGTCTATTACTTCAGCTGCATTTACTCTCAGGACACAGTACATGAGATATTTGTATGACTTTGAGTGCGAGAAGAAGAATTTTTCCACCAGAGCAGAGCTGGAGCTTGCCATCGATGGGAACAAACGCGAAGGTCGACGGTCCTCCGGCCAATATGACCCACATACTGCTACGccGCATTTAAACAGACCATCTTACACTCAAGCAGCGTTGGCTCTAGCCAGTCAAGTGGCAGCTGGATCCAGCAAGCCGCTACCGTCTCCGTACTTACACCCTGAGCTATTTGGCATGTGGGAACACATGAAGTTGGAACCAATGAAAAATGCCCTGGCTGAGGGCACCGTTGCCGCTGATCAATATCACAAACTCCTAGCCAATGTGCAGTATATGTATTCCAAGTTCTACAGCTCCAATCAACCACCAGCAGAACCACAACGCGAAGCACTGAACCTGAGTGAGATGCCAAGCTTCAGTAGTGAGAGATCAGAAGAAGGATCATCGGTTGCTAAACGTCCCCGTGTAGCCATGACCTCCCCAACTCCTGGCCCGTCTCACCATGCACCCGCTTCTATATCACACACTTCTTTGTCGTATACACCATCTCTATCCCCACAAACACCTCCATCCCGCGCCACTGCCCCACGAGTGCCGTCTCCACGTCCAATCCCATCGCATCAGAGTAGCTACGGGTTAAATGGTCTGAATGGCCTACACAGCATAAATGGAAGAAATGGAATTAATGGTCGAAGTGGCACagaaaacaataacaatacacATTCGCTCAATATAGGAGGGTTCTCCATTAACGTCCAAAGAGAAGtcGACTTCGACTCAGCCAGACCTTTGCTGCGGATAAGGATCGAACTCCTCAATGAAGTCTTCACAGGTGTTCTATATTCAAAGACTGAAACCGAGGACGATCACAATGAGCCCgacaattaa
- Protein Sequence
- MAKSVLDLYELYNLVVARQGLVEVINKKLWQEVIRGLKLPSSITSAAFTLRTQYMRYLYDFECEKKNFSTRAELELAIDGNKREGRRSSGQYDPHTATPHLNRPSYTQAALALASQVAAGSSKPLPSPYLHPELFGMWEHMKLEPMKNALAEGTVAADQYHKLLANVQYMYSKFYSSNQPPAEPQREALNLSEMPSFSSERSEEGSSVAKRPRVAMTSPTPGPSHHAPASISHTSLSYTPSLSPQTPPSRATAPRVPSPRPIPSHQSSYGLNGLNGLHSINGRNGINGRSGTENNNNTHSLNIGGFSINVQREVDFDSARPLLRIRIELLNEVFTGVLYSKTETEDDHNEPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00144354; iTF_00256633;
- 90% Identity
- iTF_00144354; iTF_00256633;
- 80% Identity
- -