Cnem001786.1
Basic Information
- Insect
- Calephelis nemesis
- Gene Symbol
- RELA
- Assembly
- GCA_002245505.1
- Location
- NJDD01000275.1:102176-126743[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-21 3.7e-17 63.4 0.5 1 71 53 123 53 138 0.87 2 2 2.3e-08 0.00016 22.3 0.1 102 168 132 201 129 202 0.75
Sequence Information
- Coding Sequence
- ATGTCTGGAAGTGACACAAGCGACTATAACTCAAAATCACCATTTTCGCAAATGGATTCACCAAGCAGTTCACCATCGCAACAAGTTCCCCAGTTAGCTAATTTCCTGACTGAGCTATCATGCGGCGAACACTCGGTACACAGAGGACAACCAAGTTTGCACATTATAGAAGAGCCTCAAAATCATTTTAGATTCAGATACAAAAGTGAAATGATGGGAACCCATGGATGTTTACTGGGTAAATCTAATCAAACCAGTAAAGCAAAGACTCATCCAACAGTTGAGCTTCGTAATTACAATGGGAAAGCTCGTATAAAATGCAGTTTAGCCCGCCACGATAATGTAGGAGATCACCCACATAGGCTGCAAGATGATCATGATAGAGATGTGAGCACAAAAAAGGATGTCCCTCAATTGCTCTTCAAAAAGTACACATCTACAAATTCTTCACCTTCTTCGTATGAAGAAAACAAAatcAGAATACAGTGTGAAAATGAAGCTAAggctataaatttaaacatagtgCGACTCAAGTTTACTGCTCACGATTTAAATACTGATATGCTACTGTGTCCGCCAGTGTTTTCAAAGCCTATTCACAACCTGAAAAGTGCAGCCACAAATGATCTGAAGATCTGCAGAATGAGCAAAATCACTAGCCGAGCTAGGGGTGGAGAGGATGTATATCTATTAgttgaaaaagttaaaaaaagtaagtatttcaaatgttaa
- Protein Sequence
- MSGSDTSDYNSKSPFSQMDSPSSSPSQQVPQLANFLTELSCGEHSVHRGQPSLHIIEEPQNHFRFRYKSEMMGTHGCLLGKSNQTSKAKTHPTVELRNYNGKARIKCSLARHDNVGDHPHRLQDDHDRDVSTKKDVPQLLFKKYTSTNSSPSSYEENKIRIQCENEAKAINLNIVRLKFTAHDLNTDMLLCPPVFSKPIHNLKSAATNDLKICRMSKITSRARGGEDVYLLVEKVKKSKYFKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -