Basic Information

Insect: Calameuta pygmaea
Gene Symbol: Hr39
Assembly: GCA_031762395.1
Location: JASANN010000516.1:188123-191622[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.61 5.6e+03 -3.6 12.3 62 163 206 315 185 358 0.57

2 5 1.4 1.3e+04 -4.8 4.8 67 103 371 406 321 446 0.42

3 5 3.7e-08 0.00034 20.2 0.0 1 21 522 542 522 546 0.92

4 5 0.63 5.8e+03 -3.6 0.0 89 113 580 604 561 611 0.54

5 5 4.9e-70 4.5e-66 224.0 0.0 202 408 708 909 683 909 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.61	5.6e+03	-3.6	12.3	62	163	206	315	185	358	0.57
2	5	1.4	1.3e+04	-4.8	4.8	67	103	371	406	321	446	0.42
3	5	3.7e-08	0.00034	20.2	0.0	1	21	522	542	522	546	0.92
4	5	0.63	5.8e+03	-3.6	0.0	89	113	580	604	561	611	0.54
5	5	4.9e-70	4.5e-66	224.0	0.0	202	408	708	909	683	909	0.95

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGCCCAGGCTGGTGGCCTCCGGCACAGTCCTGGAAGTCATCTTCGTTGGGCGCACGCATCGAGGCTGGGAAGAACGTTTCCGTCACTACGATTAACGTACCACCGGCCCATGAGATGCACGACGGTAAGAGCGTCTGCAAGTATCTGGGAGGACAGAATGGCGTGACGGTTTCAGTAGTGTCCAGCTGCGGATCAGCTTCCGCTTCTGGGTCTAGCAATGTCGTCGGTACCGGGAGCGCTGGCGAGTCCGGTTCCGTGGACGACGTTGAAGACAGTGACGGTGAGGTGAGCAAGATCGACTTCCGGGGTGTTAATCTGCGCACGAAGAAGAAACGAGATGCTTCCGGCGGACAAGAAAGTGAGAACAGTGCAATCGGCACTGACAATATTCAGCAGCAACCCGAAAGGCCAATGTCTTGGGAGGGTGAACTCTCGGACCAAGAAATGTCTTCCAATACTATCACGAACCAGGACCACGAAGAAACGTTTATGGAGGGTGTACAAGTGTGCAGTGCGAGTCCTGGACCACAGGAACAAAAGTTCCCAATAAAACCGGAGCCGGACTTTAGGTCAAGTCCAGGACTCGCTTTGGGCTCCCTTAATGAGACGGCCTTACCGCTTACTCATGCTCAGCaactgcagcagcagcagcaacagcaacaacagcaacagcagcagcaacaacgtGGTCTGGACGGTCTTGAACAGACACAGCAGAGCGACCTACCCTTGCTGGTTGGCAAACTCCTAGGGGGTTATAATAGTTCAACCCCGAATCACAGTCCTGTACTAAATCCCCGGCATCATCTTACTAAGCACAGTCACACCCGGTCTCAAGTCCCTTCGCCGGACTCGGCGATTCACTCGGCCTATAGTGTCTTCAGCTCTCCCACGCAGAGTCCTCACGCGGCACGGCACTCTGCACTAGGTGCTGGCAGTCCTGTACCATCCTCATCGCTGTCACTTTCACGACACAGTTTCAATAATTCCACGTCTTCTTTATCcttatctctctcgcactctttATCGAGGAACAATTCGGACGCCTCCAGTAGCTGTTATAGCTACGGATCCCTCAGTCCACCGACACACTCGCCCGTACAGCAGCCGAGGCATTCCCAtccgcagcagcagcagcaacagcagcatcaTCAAGTCACTCAGGGTAGTCCTTTGCATCTACCCGCAGCCACCGGTGCCACTCATCATTATTCCACCCCGGGATCGGAACTCTCGGAGGGTCTCGCAGAGGACCAAGAAGACTGTAGGATAGCGCCGGCACCCTCGGGCATCTCCACAAGGCAGCAACTTATAAATAGTCCATGTCCTATATGCGGCGACAAGATCAGCGGCTTCCATTATGGTATATTCTCCTGCGAATCCTGTAAGGGATTCTTCAAGAGGACCGTACAGAATCGTAAGAATTATGTGTGCCTACGTGGTGCGGGATGTCCCGTCACTGTCGCCACTAGGAAGAAGTGTCCAGCATGCCGATTCGACAAGTGCCTGAATATGGGAATGAAGCTGGAGGCGATAAGGGAGGATAGGACTAGAGGCGGTCGCAGTACCTATCAGTGTACCTATACTCTACCTGCTAACCTTATCGGCGGGCCTACTGGTGGCATTTCCGGTGATAAAATCACCGGTGGTACCTGTAGTCCAGCACCGCCGGGATCAGAGCATCATCACTCAATGAGACATCATTCGAATCATTCGCACAAGTTGCAAGTGGTGCCACAGCTCCTGCAGGACATCATGGACGTGGAGCATCTCTGGCATTACAACGACAATGATCGTATGACTAGTGGCCAGGGTAGTGGTATCAGTGGTGGTAACGGTAGTGGTAGCGCTGTCGGTgttggtggcggtggtggtggtagcgGTAGCGTTAGTGGTGTCAGTGGTAGTGCTAGTGGCGGTGGAAATTCATCCGGGGGCGGAAGTTCATCCGCCGTCGGAAGTAACGGGAACATACCTAGAGGAGAATCGTCGAGACCAAGTTCCGCGGGTCCTCCATCCTCCAATCACGAACAACATTCACCACCAGCGAGTACCCCTAACTCGAATTCAACCTCCAATCCCAATGGGAATCCCACGCAGCATCCGGACTTTCTTTCAAATCTGTGTAACATCGCCGATCATAGACTCTACAAGATCGTCAAGTGGTGCAAGAGTCTACCGCTCTTCAAGAACATCTCCATAGACGATCAGATATGCCTTCTTATCAACTCCTGGTGCGAACTACTCTTATTCTCCTGCTGCTTTCGCAGTATGAGTACGCCTGGTGAGATCAGGGTGTCCCTAGGCAAGTCGATAACTCTCGAGCAGGCGAGACAGTTAGGTCTTGCGACGTGTATCGAGAGGATGCTGGCTTTCACAAATAACCTTAGACGACTCAGGGTGGATCAGTACGAGTACGTGGCGATGAAGGTCATAGTTCTGCTAACCTCGGACACTAGTGAACTGAAAGAACCCGAGAAGGTAAGAGCGTCCCAGGAGAAGGCTCTCCAGGCACTGCAGCAATATACAATCGCAAGGTATCCCGAGATGCCGGCAAAGTTTGGAGAGTTGCTACTCAGGATCCCGGACCTGCAGAGGACCTGTCAGGCCGGGAAGGAGTTGCTCAGCGCAAAGCGTGCCGAGGGCGAAGGCAGCTCTTTCAATCTACTAATGGAACTTCTACGAGGCGATCATTGA
Protein Sequence: MSEQNGPTEGPGPGWWPPAQSWKSSSLGARIEAGKNVSVTTINVPPAHEMHDGKSVCKYLGGQNGVTVSVVSSCGSASASGSSNVVGTGSAGESGSVDDVEDSDGEVSKIDFRGVNLRTKKKRDASGGQESENSAIGTDNIQQQPERPMSWEGELSDQEMSSNTITNQDHEETFMEGVQVCSASPGPQEQKFPIKPEPDFRSSPGLALGSLNETALPLTHAQQLQQQQQQQQQQQQQQQRGLDGLEQTQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHPQQQQQQQHHQVTQGSPLHLPAATGATHHYSTPGSELSEGLAEDQEDCRIAPAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGGPTGGISGDKITGGTCSPAPPGSEHHHSMRHHSNHSHKLQVVPQLLQDIMDVEHLWHYNDNDRMTSGQGSGISGGNGSGSAVGVGGGGGGSGSVSGVSGSASGGGNSSGGGSSSAVGSNGNIPRGESSRPSSAGPPSSNHEQHSPPASTPNSNSTSNPNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00676835;
90% Identity: iTF_00770401;
80% Identity: iTF_00255111;