Basic Information

Insect: Calameuta pallipes
Gene Symbol: -
Assembly: GCA_030142375.1
Location: JARQSW010000427.1:3714172-3720444[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00018 0.014 16.0 2.3 2 23 771 793 770 793 0.94

2 13 0.013 1 10.2 0.5 3 23 822 842 820 842 0.93

3 13 0.0022 0.17 12.6 1.8 3 21 938 956 937 957 0.96

4 13 0.87 68 4.4 0.4 2 23 974 995 973 995 0.95

5 13 0.093 7.3 7.5 0.2 1 20 1082 1101 1082 1103 0.93

6 13 0.0022 0.18 12.6 3.6 2 23 1122 1144 1121 1144 0.94

7 13 0.0032 0.25 12.1 4.1 1 23 1161 1183 1161 1183 0.98

8 13 2 1.6e+02 3.3 0.1 1 20 1189 1208 1189 1210 0.82

9 13 1.9 1.5e+02 3.4 3.7 2 23 1211 1232 1211 1232 0.94

10 13 0.00065 0.051 14.3 0.4 1 23 1432 1454 1432 1454 0.98

11 13 1.5 1.2e+02 3.7 2.0 1 23 1842 1865 1842 1865 0.94

12 13 6.4 5e+02 1.7 3.3 1 23 1937 1960 1937 1960 0.96

13 13 4.6 3.6e+02 2.2 0.1 1 23 2064 2089 2064 2089 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00018	0.014	16.0	2.3	2	23	771	793	770	793	0.94
2	13	0.013	1	10.2	0.5	3	23	822	842	820	842	0.93
3	13	0.0022	0.17	12.6	1.8	3	21	938	956	937	957	0.96
4	13	0.87	68	4.4	0.4	2	23	974	995	973	995	0.95
5	13	0.093	7.3	7.5	0.2	1	20	1082	1101	1082	1103	0.93
6	13	0.0022	0.18	12.6	3.6	2	23	1122	1144	1121	1144	0.94
7	13	0.0032	0.25	12.1	4.1	1	23	1161	1183	1161	1183	0.98
8	13	2	1.6e+02	3.3	0.1	1	20	1189	1208	1189	1210	0.82
9	13	1.9	1.5e+02	3.4	3.7	2	23	1211	1232	1211	1232	0.94
10	13	0.00065	0.051	14.3	0.4	1	23	1432	1454	1432	1454	0.98
11	13	1.5	1.2e+02	3.7	2.0	1	23	1842	1865	1842	1865	0.94
12	13	6.4	5e+02	1.7	3.3	1	23	1937	1960	1937	1960	0.96
13	13	4.6	3.6e+02	2.2	0.1	1	23	2064	2089	2064	2089	0.88

Sequence Information

Coding Sequence: ATGGAGGATTTAGACATTCAAAGCAAGCCATCTGAAGAAATCACTAATATGTCAGATATTCCTGATGATTTAAGTCATAAATCGATGGCAGTAATGGAGAACAAAAGCATTAGAGCTATCACAGACACTGAAAGAGAGGCAAATAGTTTAGAATCGGACACGTGTCATTGGAGAGATATGTTGAAATTATGTACACCACTATCGATACAGCTTACACATTTATCAAAAGacattttgaagaaatttacAGTGCCTAAGAAGAATGTTACACAGAGAGTATTAGGTAGTGCAAAAAATTTGGTAATGGACTCTAGGGATTACCGTTccagaaaacgaaaaaaaaagaatgtcagTACAAAAGTTAAATGTGCAAGGAAAAAGCAAAAGACAATACTTGATAAAACCTCACATCCCAATGAAAGTGATGAAAATTCCATACTGAAATCTTGTACTGTTACTTCAACAAATGATAATGGATCTACTGCTCCAGCTTGTGCATCTGAGGAATATATAAGatctgagaaaattattagtgCATCTGCAATGGACAAAGTATTAGATGGGCCTATCTCTATGGAACATACAGGTAAAAATGATACATCCTCGGTCCAATGTCTAAATGAGAACACAGAAGAGCGTACccaagttgaaaaaaataatacggaAACAGAAGAATCGCGATACCAGGAATATGTGCGTAACATATTAATGGAATATTGCTACTCTTATGGGAATTTGTCTCATATGTCAAAAGGAATGAATGATAACGAAAATAGTAGTGATACGAAAAGCACTACTGGAGATAAACGACGTAGTAACGAGAATTTTCCTGATGACCAGATTCCCTCATggaattcaagaaaaagaagaaaaaaggtacaattaaattcaaagGACGAAACGATTGTTAACAGAAAATGTCCAAAGAAGAAACAACAGCaaagaaatcagaaaaatttcaaatcaacaCCAAAAAAAGATGAACGTAGACGACCAGTTTTTATGCAACGAACTAAATCCCCGAGTTGTACTCCGCCAGCAGCTGAGCAAGAGATAGGGAAAACTGGCGCAGACTCcccaaagaaattaaaaatccagtTAATGAAGCTAGAAGACGTATCTGGCATGTACGCTCCAATAGAATCTACTGATATGATTctagaaaatgaaagagatgTCTCCTCATCAATGAATAATGACAATGACTCTGTAGTTGGTTCAGAAGGAATCAGTGATGCAGAGACAGTAGTGAATTCAATGTTCACAGAGGAAAGCAGAAATGGCATTGAGATTCAAGAATCTGATCACGCCTTGGATTCGATTCCAATAATAGCATTGGAAAAGAAGTCGGGTTCTAGTTCTGAAATTTCGGACGTTTCTACCGAAAGGGATTTAGAAATTGTTGAAAAGCAGCGGAAAACGTCTATGTCCTCAGATGAAATAGTTGATCGGAATAGTGAAGCGGATAATTATATCAATGAAGTAGACGCAGATAATGATGTAGACGCTATATTAAGACTGAGGTACGGCATTAAGAAGGACCCAGTTATACtcttggaaaaattgaatcttACACATAATTATGTGTCAACAAATGTTTATCAATACGATCATGATGTCAGCGACGTTCTTGAAGAATCCGACTCCAGCAGCAGTGATTCGGAGATCTTTATGTTTGTGAGaaaacgtaaattttcatctaTGAGGAGTCGTCGGATATCCTCTTCAAGTGAAGAAGAACACGGATCCCCGATCAAACCTGTGTCTACACCAGTTTCGAGTAAAGATGAGGATGGTAAGAATAGAAGTCCTATTTCCAGAACTACAAACACCAGGGAAGAGACTTCGGAAGTGTTTGTTACTAATCAAACTTCAGGTATTTCTAAAGACACGTCCTTGGAGGGAAGCGAACATGTTGCGACcttagtaaagaaaaaagtttcccAACCGGAAAATACGAACAATTTGTCTCCTAAAAATGTTGTGCAAAATCCTAACATTATAGAATACAATTCAGATTCTTCGGATTTGGATATCCAGATATTGTCAGTGATGACGATGAATTCTAATGTTCCACCAAAAACCTGTGAAAAGATGGGAATAAATTCCCCCAGCACTGCATTGAGCCCTAAAAAATCGCTTTCTATGTTAGGTACTGATAATACTGGTAGTGTAGTTGTGCCGCATACAAATGAAACACCAATAGTAAATACAAATGAAACACCAATAGTAAATACACAATCACCAGTGAAAAACACGCAACCGCCATCGGGCTCGAAAATCACACCTGTCAGTACAACACCAAAGCTCAGCTGTCATATATGCAACCGGAAGTACGTGAGGAAGAGATCACTCAAGATTCACATGGAGTTGCAACATACCAACAATCCTAGCAAGTTCTCAAAACCAGACACAACGTCGTGCACGACACAAGAATGCGATAATGCGAATGAGTGCTTGGACTGCGGTATatgttcaaaaaaatttgtctcgaAGAAAGAATTCGTCGATCACGTATTTAACCATCAGTCAGAGGCGCAGCAAGATTACAGAACAGCACCTGATAAACGTTCACGAGCAGTATGGTTGGACCTCTACGGTCTGAAAGACAAGAATGCTGAAGATCAACATGtggaaaaatccaaaaaggacaaaaaagatTCATCCAGTGACAAACGGATTAGAAAGGAAGAGCAGATTATATCTAGCTTGACAGCTTCTCCGAAAGAAGTTGTTGTATGCCCATGTCATCCTAATAATGGATTGTTAAATGAACAAGGTTCTAGCGTTTATATAGAGATGGTTTTACTGTGTGAACATTGTAATGTTGTCTTCCGCAGGAAAGAGTGCCTGGAGACACATTATCGTGTTAGCGCGCAGTGTTCCGTAAACAGGACAAGTGGTAGGGTACCAAAATTGTACTGCACTGCGTGCAATGTTACTGTGGAGTCCTTATCTGTATTGCGTCATCATCTAGAGATGCATCCACGTCTTCAGGTTCGTGGCATAGTAACCTTCCTATGTAACATATGCAAAGTGATCTTCTTCGGTATTGGAAGTATATTTCGCAGACATTGGTTCAGTCATATAAAGAATCCTCTCTTCGTGGCTAGTCGTCATTCGTTCCCTAAGATATCTGTTATGAAAGCACTTGAAAATTACAACGTATCTGCAGAGGAAAGAATGCAGGTGGCTCAAGCTGCTGAACTggctgaaaatataaaatacgtcCTCATCGCTGAGCACGTCTGTCGTAATTGTAAATTACCCTTTGGCTCTGAGGCTGATCTTACGAATCATTTAACATCCTGCTCTAGCAGTAAGAATACATCTAATGTTACTAATGCATTAAATGATGGCACGACATGTTCGACTTGTCAAAAAACTTTTACTGATAAGAGCAATTATGACATTCATGTTGACAAGTGCCATGCGATGGCCGATGGATCCTCTCCTGGAAAATCAAAGGACACGATTGATTATAGTTGTGACATTTGCCATATGACCTGTCAAACGGAAGATCAATTGAAGCTTCATCAGAATAGTCACAGCAGTGCTGGTCTGTTCTTATGCTCTCGATGTGGCATCTCTTTCAGTGCAGTGGAGCCCTTTACTACCCATACACAAGCCACGTGCACAATATGTGACAAGCAATTCGACTGTCAAAAACGGTATCAGGATCATCTGTCAAGTCATTTCACgaatcttacaattagtgaaAAGCCTCAAGAATCTTCAACAAAAACACTGACCTCGTGTGAAACAAACCTGGAAGTAGATAAAAGAACCGCGAAACAGAATCATGTAGAAAATACGGAGGTAACTGTGAGTTCAGGCAATTCGCCTCTTCAAGCAACACGATCTGCCGAACCAGATCAATCAAAATCGCAAACCGAAGTTAGATATCTGATAATCAGAGACGAAGTCACAAAGTTACCCAAGCAAGTAGTAACTATCACTTCCGCAGGCAGCACTTCGAATACATCATGTATATCTAAAGAATCTGAGCAGCAAACAAGTATTCTCAATGAAATTCTATCTATTAATAACGCCATGAAGAATGTCACGAATATCGTTGAAGCCCAACCAACTAATCCAGACAAGGATCCCTTGGCTTCaggtgaagaaaaagatacagCTACAACTATGGATACGGAAGTGCCAACGGATAGTTCAGAAACAAGTTCTACTACTGGTATGCCACATAGCTCAAACAATGAAAAGACACCTACATCAGGATTTTTACGCGTGAAAAGTATGTCAGAGCTTTTGGAGAAGCGTGATAAGAAATCTTACATATGTAAAACATGTGGATTACCATGTACGTCTGCTGAGAATTTGGCAGAACATTCAAACACGCATGTTACTCACCAAATGGCTAACGAGAAGATACCACCATCGGTCAATGGTGCCCAGCGTATAGTTGACCAGGATAGTTTAAGATTACTCAATCAATATATAACTTcgaacaaattaattttacagccAATAAGAAGCAATATTACTAACGCCAGTTCTAACAACTTTAATACCCAAATGACCACTAATGTCAATAATACGCAACAAGCTAATAACAAAGGCATTTGTGGCAATGCTTCTGCTTTTACTCCGTGTGTGATATGCGGTACAGTTTTCAATGCCACACAGAATCCTATTCATTGTCAAACAGCAACAACAAGTACAGGACAAGTTAATACGCATACCAACGCCAGAGTTTATCAGCCCGTTGCAAATAATCAAACACAAAGTATTGAAAATGCATCTACATTTAATTCAGCCGTACATCATTCTCCATTCGTAACGTATACTTCAAATACAATTGGAAGAGAACCACCTGTCAGTGCTGTTAACGGTGTCAacgtaaatttgaatatgaatCAACAATTGGCACAACCCCTTCCAAATTCTCAATGGACTAACTTAACTTACGATACTACAAATGTTCCTATTGTGCATAGTCAAGTCCCATCACGGCTTCCGCCTCCTTACTCAGCTGCGACTAGTATTCATTCTAATACCCTTCCAAAGAATACGAATGGCACCAATACTGCTACCATTAACTCTCACTGCATTGTTCCGAATCCTCCAATGCGTCCACAGTATCCTTACAGAGCAGTCAGTCAATCAAGCAACAAATCTGTTGCTGCGAAACCCCTCAATTCCTCCTTTTCGTCTTCAACTTCGTTCACTAATAACAACACGCAGTCTATCACTACCGACGCGCCAACCGGAAGTACAAGACCTTCAGGATATTCAATGAACTACGGCATTCTGAATGTTCCATTACAGCAGTCACAATCAGATATTTTTCGAACAGAATCTCATGTGACACGAAAACCTGCTCACCAATCGATATCTCAGACTCTACATCACCTGCCTGAGCAGCCAAGTCAGCTAGAGTCACAACGACCGGCGCAATtgtgtaatttcattaatcaacCAAAAACGACACAAACATACCAACAGACTTCGCAGCAAACAACCAGAGAACAATCATGCATGGATTTATCCAGCGGACTAATCTTTAATTGTCCCTCCTGTAAAGATTTCACATGCACTACTGCTGAGGAATTGAAATTGCACCGAATACGACATACAAAACCGCAACCGATAAAGCCAAGCAAATCATACTGTACCTCAACCTCTGATGTTGAACCTCGTGCACATAGCAGTTCATATTCTCCTATAACGAATCAACAACCGAGACCATCTTCCAACGAACCATTATATGTGTGTAATAAATGTCATATCTTCCGTACCACCAGTCACGTGGAACTTGAAGAGCATACGAAACAGCATCACAAATCCTATATATGCCAGTTGTGCCATATATACAAGTGTAAATCCGCGACCCAAATGCAAGATCATATTAATCTACACATAGATGGGAAAATTGCGCCACATGCGGTACGACACACCCTTCAACTCGATGGTAAAGTCGTATCAAAAATTCAAGCATCACAACTTCCGAGTTCATCCTTTAATGAATCCTCGCACTCTGCCGGTGTTCGATCTTCACCAGTACATCAGACGCAACCGACTCAGGTCAGGAGCAAACAATATTCAGAATGTGAATTTCGCAGTAACGGTGATTCCCAAGTGCTGGATCATGAGACTAATACAGATACTTTAAATTcatgttccaaaaaaaagcCAAGGGAACATtcaggattaaaaaaaatgctttattatttttgtaaagtaTGTAAACCAACTCCTGTATTTCAGACTGTAGCTGAGCTGGAACGGCATCAAGTTAGCCTGCATCCTTAA
Protein Sequence: MEDLDIQSKPSEEITNMSDIPDDLSHKSMAVMENKSIRAITDTEREANSLESDTCHWRDMLKLCTPLSIQLTHLSKDILKKFTVPKKNVTQRVLGSAKNLVMDSRDYRSRKRKKKNVSTKVKCARKKQKTILDKTSHPNESDENSILKSCTVTSTNDNGSTAPACASEEYIRSEKIISASAMDKVLDGPISMEHTGKNDTSSVQCLNENTEERTQVEKNNTETEESRYQEYVRNILMEYCYSYGNLSHMSKGMNDNENSSDTKSTTGDKRRSNENFPDDQIPSWNSRKRRKKVQLNSKDETIVNRKCPKKKQQQRNQKNFKSTPKKDERRRPVFMQRTKSPSCTPPAAEQEIGKTGADSPKKLKIQLMKLEDVSGMYAPIESTDMILENERDVSSSMNNDNDSVVGSEGISDAETVVNSMFTEESRNGIEIQESDHALDSIPIIALEKKSGSSSEISDVSTERDLEIVEKQRKTSMSSDEIVDRNSEADNYINEVDADNDVDAILRLRYGIKKDPVILLEKLNLTHNYVSTNVYQYDHDVSDVLEESDSSSSDSEIFMFVRKRKFSSMRSRRISSSSEEEHGSPIKPVSTPVSSKDEDGKNRSPISRTTNTREETSEVFVTNQTSGISKDTSLEGSEHVATLVKKKVSQPENTNNLSPKNVVQNPNIIEYNSDSSDLDIQILSVMTMNSNVPPKTCEKMGINSPSTALSPKKSLSMLGTDNTGSVVVPHTNETPIVNTNETPIVNTQSPVKNTQPPSGSKITPVSTTPKLSCHICNRKYVRKRSLKIHMELQHTNNPSKFSKPDTTSCTTQECDNANECLDCGICSKKFVSKKEFVDHVFNHQSEAQQDYRTAPDKRSRAVWLDLYGLKDKNAEDQHVEKSKKDKKDSSSDKRIRKEEQIISSLTASPKEVVVCPCHPNNGLLNEQGSSVYIEMVLLCEHCNVVFRRKECLETHYRVSAQCSVNRTSGRVPKLYCTACNVTVESLSVLRHHLEMHPRLQVRGIVTFLCNICKVIFFGIGSIFRRHWFSHIKNPLFVASRHSFPKISVMKALENYNVSAEERMQVAQAAELAENIKYVLIAEHVCRNCKLPFGSEADLTNHLTSCSSSKNTSNVTNALNDGTTCSTCQKTFTDKSNYDIHVDKCHAMADGSSPGKSKDTIDYSCDICHMTCQTEDQLKLHQNSHSSAGLFLCSRCGISFSAVEPFTTHTQATCTICDKQFDCQKRYQDHLSSHFTNLTISEKPQESSTKTLTSCETNLEVDKRTAKQNHVENTEVTVSSGNSPLQATRSAEPDQSKSQTEVRYLIIRDEVTKLPKQVVTITSAGSTSNTSCISKESEQQTSILNEILSINNAMKNVTNIVEAQPTNPDKDPLASGEEKDTATTMDTEVPTDSSETSSTTGMPHSSNNEKTPTSGFLRVKSMSELLEKRDKKSYICKTCGLPCTSAENLAEHSNTHVTHQMANEKIPPSVNGAQRIVDQDSLRLLNQYITSNKLILQPIRSNITNASSNNFNTQMTTNVNNTQQANNKGICGNASAFTPCVICGTVFNATQNPIHCQTATTSTGQVNTHTNARVYQPVANNQTQSIENASTFNSAVHHSPFVTYTSNTIGREPPVSAVNGVNVNLNMNQQLAQPLPNSQWTNLTYDTTNVPIVHSQVPSRLPPPYSAATSIHSNTLPKNTNGTNTATINSHCIVPNPPMRPQYPYRAVSQSSNKSVAAKPLNSSFSSSTSFTNNNTQSITTDAPTGSTRPSGYSMNYGILNVPLQQSQSDIFRTESHVTRKPAHQSISQTLHHLPEQPSQLESQRPAQLCNFINQPKTTQTYQQTSQQTTREQSCMDLSSGLIFNCPSCKDFTCTTAEELKLHRIRHTKPQPIKPSKSYCTSTSDVEPRAHSSSYSPITNQQPRPSSNEPLYVCNKCHIFRTTSHVELEEHTKQHHKSYICQLCHIYKCKSATQMQDHINLHIDGKIAPHAVRHTLQLDGKVVSKIQASQLPSSSFNESSHSAGVRSSPVHQTQPTQVRSKQYSECEFRSNGDSQVLDHETNTDTLNSCSKKKPREHSGLKKMLYYFCKVCKPTPVFQTVAELERHQVSLHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00297919;
90% Identity: iTF_00252438;
80% Identity: -