Basic Information

Insect: Calameuta filiformis
Gene Symbol: -
Assembly: GCA_030142265.1
Location: JARQSU010000385.1:3582116-3588460[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00018 0.013 16.0 2.3 2 23 795 817 794 817 0.94

2 14 0.013 0.97 10.1 0.5 3 23 846 866 844 866 0.93

3 14 0.0022 0.16 12.6 1.8 3 21 962 980 961 981 0.96

4 14 0.85 64 4.4 0.4 2 23 998 1019 997 1019 0.95

5 14 0.092 6.9 7.5 0.2 1 20 1106 1125 1106 1127 0.93

6 14 0.0022 0.17 12.5 3.6 2 23 1146 1168 1145 1168 0.94

7 14 0.24 18 6.2 1.7 5 23 1189 1207 1188 1207 0.96

8 14 2 1.5e+02 3.3 0.1 1 20 1213 1232 1213 1234 0.82

9 14 1.9 1.4e+02 3.3 3.7 2 23 1235 1256 1235 1256 0.94

10 14 0.00064 0.048 14.2 0.4 1 23 1456 1478 1456 1478 0.98

11 14 9.2 6.9e+02 1.2 0.1 2 11 1561 1570 1560 1574 0.86

12 14 0.67 50 4.7 2.1 1 23 1866 1889 1866 1889 0.96

13 14 2.9 2.2e+02 2.7 5.6 1 23 1934 1957 1934 1958 0.93

14 14 0.4 30 5.4 0.1 1 23 2088 2113 2088 2113 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00018	0.013	16.0	2.3	2	23	795	817	794	817	0.94
2	14	0.013	0.97	10.1	0.5	3	23	846	866	844	866	0.93
3	14	0.0022	0.16	12.6	1.8	3	21	962	980	961	981	0.96
4	14	0.85	64	4.4	0.4	2	23	998	1019	997	1019	0.95
5	14	0.092	6.9	7.5	0.2	1	20	1106	1125	1106	1127	0.93
6	14	0.0022	0.17	12.5	3.6	2	23	1146	1168	1145	1168	0.94
7	14	0.24	18	6.2	1.7	5	23	1189	1207	1188	1207	0.96
8	14	2	1.5e+02	3.3	0.1	1	20	1213	1232	1213	1234	0.82
9	14	1.9	1.4e+02	3.3	3.7	2	23	1235	1256	1235	1256	0.94
10	14	0.00064	0.048	14.2	0.4	1	23	1456	1478	1456	1478	0.98
11	14	9.2	6.9e+02	1.2	0.1	2	11	1561	1570	1560	1574	0.86
12	14	0.67	50	4.7	2.1	1	23	1866	1889	1866	1889	0.96
13	14	2.9	2.2e+02	2.7	5.6	1	23	1934	1957	1934	1958	0.93
14	14	0.4	30	5.4	0.1	1	23	2088	2113	2088	2113	0.92

Sequence Information

Coding Sequence: ATGGAGGATTTAGACATTCAAAGCAAGCCATCTGAAGAAATCGCTAATATGTCAGATATTCCTGATGATTTAAGTCATAAATCGATGCCAGTAATGGAGAACAAAAGCATTAGAGCTATCACAGACACTGAAAGAGAGGCAAATAGTTTAGAATCGGACACATGTCATTGGAGAGATATGTTGAAATTATGTACACCACTATCGATACAGCTTACACATTTATCAAAAGacattttgaagaaatttacAGTGCCTAAGAAGAATGTTACACAGAGACTATCAGGTAgcataaaaaatttggtaatGGACTCTAGGGATTACCGTTctagaaaacgaaaaaaaaagaatgtcagtACAAAAGTTAAATATGCAAGGAAAAAGCAAAAGACAATACTTGATAAAACCTCAAATCCCAATGAAAGTGATGAAAATTCCATACTGAAATCTTGTACTGTTACTTCCACAAATGATAATGTATCTACTGCTCCAGCTTGTGCATCTGAGGAATATATAAGAtctgagaaaattattagtgCATCTGCAATGGACAAAGTATTAGATGGGCCTATCTCTATGGAACATACAGGTAAAGATGATACATCCTCGGTCCAATGTCTAAATGAGAACACAGAAGAGCATACccaagttgaaaaaaataatacggaaACAGAAGAATCGCGATACCAGGAATATGTGCGTAACATATTAATGGAATATTGCTACTCTTATAGGAATTTGTCTCATATGTCAAAAGGAATGAATGATAACGAAAATAGTAGTGATACGAAAAGCACTACTGGAGATAAACGACGTAGTAACGAGAATTTTCCTGATGACCAGATTCCCTCATggaattcaagaaaaagaagaaaaaaggcacaattaaattcaaaggaCGAAACGATTGTTAACAGAGAATGTCCAAAGAAGAAACAACAGCaaagaaatcagaaaaatttcaaatcgacaCCAAAAAAAGATGGTCGTAGACGACCAGTTTTTATGCAACGAACTAAATCCCCGAGTTGTACTCCGCCAGCAGCTGAGCAAGAGATAGGGAAAACTGGCGCAGActccccaaaaaaattaaaaatccagtTAATGAAGCTAAAAGACGTATCTGGCATGTACGCTCCAATAGAATCTACTGATATGATTCTAGAAAATGAAAGGGATGTCTCCTCATCAATGAATAATGACAATGATTCTGTAGTTGGTTCAGAAGGAATCAGTGATGCAGAGACAGTAGTGAATTCAATGTTCACAGAGGAAAGCAGAAATGGCATTGAGATTCAAGAATCTGATCACGCCTTGGATTCGATTCCAATAATAGCACTGGAAAAGAAGTCGGGTTCTGGTTCTGAAATTTCGAACGTTTCTACCGAAAGGGATTTAGAAATTGTTGAAAAGCAGCGGAAAACGTCTATGTCCTCAGATGAAATAGTTGATCGGAATAGTGAAGCGGATAATTATATCAATGAAGTAGACGCAGATATTGATGTAGACGCTATATTAAGACTGAGGTACGGCATTAGGAAGGACCCAGTTatacttttagaaaaattgaatcttaCACATAATTATGTGTCAACAAATGTTTATCAATACGATCATGATGTCAGCGACGTTCTTGAAGAATCCGACTCCAGCAGCAGTGATTCGGAGATCTTTATGTTTGTGAGAAAACGTAAATTGTCATCTATGAGGAGTCGTCGGATATCCTCTTCAAGTGAAGAAGAACAAGGATCCTCGATCAAACCTGTGTCTACACCAGTTTCGAGTAAAGATGAGGATGGTAAGAATAGAAGTCCTATTTCCAGAACTACAAACACCAGGGAAGAGACTTCGGAAGTGTTTGTTACTAATCAAACTTCAGGTATTTCTAAAGACACGTCCTTGGAGGGAAGCGAACATGTTGCGACcttagtaaagaaaaaagtttcccAACCGGAAAATACGAACAATTTATCTCCTAAAAATGTTGTGCAAAATCCTAACATTATAGAATACAATTCAGATTCTTTGGATTCGGATATCCAGATATTGTCAGTGATGACGATGAATTCTAATGTTCCACCAAAAACCTGTGAAAAGATGGGAATAAATTCCCCCAGCACTGCATTGAGCCCTAAAAAATCGCTTTCTATGTTAGGTACTGATAATACTGGTAGTTTAGTTGTGCCGCATACAAATGAAACACCAATAGTAGATACAAATGAAACACCAATAGTAGATACAAATGAAACACCAATAGTAGATACAAATGAAACACCAATAGTAGATACAAATGAAACACCAATAGTAAATACCCAATCACCAGTGAAAAACACGCAAACGCCATCGGGCTCGAAAATCACACCTGTCAGTGCAACACCAAAGCTCAGCTGTCATATATGCAACCGGAAGTACGTGAGGAAGAGATCACTCAAAATTCACATGGAGTTGCAACATACCAACGATCCTAGCAAGTTCTCAAAACCAGACACAACGTCGTGCACGACACAAGAATGCGATAATGCGAATGAGTGCTTGGACTGCGGTAtatgttcaaaaaaatttgtctcgaAGAAAGAATTCGTCGATCACGTATTTAACCATCAGTCAGAGGCACAGCAAGATTACAGAACAGCGCCTGATAAACGTTCACGAGCAGTATGGTTGGACCTCTACGGTCTGAAAGATAAGAATGCTGAAGATCAACATGtggaaaaatccaaaaaggacaaaaaagatTCATCCAGTGACAAACGGATTAGAAAGGAAGAGCAGATTATATCTAGCTTGACAGCTTCTCCGAAAGAAGTTGTTGTATGCCCATGTCATCCTAATAATGGATTGTTAAATGAACAAGGTTCTAGCGTTTATATAGAGATGGTGTTGCTGTGTGAACATTGTAATGTTGTCTTCCGCAGGAAAGAGTGCCTGGAGACACATTATCGTGTTAGCGCGCAGTGTTCCGTAAACAGGACAAGTGGTAGGGTACCAAAACTGTACTGCACTGCGTGCAATGTTACTGTGGAGTCCTTATCTGTCTTGCGTCATCATCTAGAAATGCATCCACGTCTTCAGGTTCGTGGCATAGTAACCTTCCTATGTAACATATGCAAAGTGATCTTCTTCGGTATTGGAAGTATATTTCGCAGACATTGGTTCAGTCACATAAAGAATCCTCTCTTCGTGGCTAGTCGTCATTCGTTTCCTAAGATATCTGTTATGAAAGCACTTGAAAATTACAACGTATCTGCAGAGGAAAGAATGCAGGTGGCTCAAGCTGCTGAACTggctgaaaatataaaatacgtcCTCATCGCTGAGCACGTCTGTCGTAATTGTAAATTACCCTTTGGCTCTGAGGCTGATCTTACCAATCATTTAACATCCTGCTCTGGCAGTAAGAATACATCTAATGTTACTAATGCATTAAATGATGGCACGACATGTTCGACTTGTCAAAAAACTTTTACTGATAAGAGCAATTATGACATTCATGTTGACAAGTGCCATGCGATGGCCGATGGATCCTCTCCTGCAAAATCAAAGGACACGATTGGTTATAGTTATGACATTTGCCATATGACCTGTCAAACGGAAGATCAATTGAAGCTTCATCAGAATAGTCACAGCAGTGCTGGTCTGTTCTTATGCTCTCGATGTGGCATCTCTTTCAGTGCAGTGGAGCCCTTTACTACCCATACACAAGCCACATGCACAATATGTGACAAGCAATTCGACTGTCAAAAACGGTATCAGGATCATCTGTCAAGTCATTTCACGAATCTTGCAATTAGTGAAAAGCCTCAAGAATCTTTAACAAAAACACTGACCTCGTGTGAAACAAACCTGGAAGTAGATAAAAGAACCGCGAAACAGAATCATGTAGAAAATACGGAGGTAACTGTGAGTTCAGGCAATTCGCCTCTTCAAGCAACACGATCTGCCGAACCAGATCAATCAAAATCGCAAACCGAAGTTAGATATCTGATAATCAGAGACGAAGTCACAAAGTTACCCAAGCAAGTAGTAACTATCACTTCCGCAGGCAGCACTTCGAATACATCATGTATATCTAAAGAATCTAAGCAGCAAACAAGTATTCTCAATGAAATTCTATCTATTAATACCCCCATGAAGAATGTCACGAATATCGTTAAAGCTCAACCAGATAATATAGGCAAGGATCCCTTGGCTTCAGGTGAAGAAAAGGATACAGCTACAACTATGGATACGGAAGTGCCAACGGATAGTTCAGAAACAAGTTCTACTACTGGGATGCCACATAGCTCAAACAATGAAAAGACACCTACATCAGGATTTTTACGCGTGAAAAGTATGTCAGAGCTTTTGGAGAAGCGTGATAAGAAATCTTACATATGTAAAACATGTGGATTACCATGTACGTCTGCTGAGAATTTGGCAGAACATTCAAACACGCATGTTACTCACCAAATGGCTAATGAGAAGATACCACCATCGGTCAACGGTGTCCAGCGTATAGTTGACCAGGATAGTTTAAGATTACTCAATCAATATATAACTTCGAACAAATTAAGTTTACAGCCAATAAGAAGCAATATTACTAACGCCAGTTCTAATAACTTTAATACCCAAATGACCACTAATGTCAATAATACGCAACAAGCTAATAACGAAGGCATTTGTGGCAATGCTTCTGCTTTTACTCCGTGTGTGATATGCGGTACAGTTTTCAATGCCACAGAGAATCCTATTCATTGTCAAGCAGCAACAACAAGTACAGGACAAGTTAATACGCATACCAACGCCAGAGTTTATCAGCCCGTTGCAAATAATCAAACACAAAGTATTGAAAATGCATCTACATTTAATTCAGCCGTACATCATTCTCCATTCGTAACGTATACTTCAAATACAATTGGAAGAGAACCACCTGTCAGTGCTGTTAACGGTGTCAACgtaaatttgaatatgaatCAACAATTGGCACAACCCCTTCCAAATTCTCAATGGACTAACTTAACTTACGATACTACAAATGTTCCTATTGTGCATAGTCAAGTCCCATCACGGCTTCCACCTCCTTACTCAGCTCCGACTAACATTCATTCTAATACCCTTCCAAAGAATATGAATGGCACCACTACTGCTACCACTAACTCTCACTGCATTGTTCCGAATCCTCCAATGCGTCCACAGTATCCTTACAGAGCAGTCAGTCAATCAGGCAACAAATCTGTTCCTGCGAAACCCCTCAATTCCTCCTTTTCGTCTTCAACTTCGTTCACTAATAACAACACGCAGCCTATCACTACCGACGCGCCAATCGGGAGTACAAGACCTTCAGGATATTCAATGAACTACGGCATTCTGAATGTTCCATTACAGCAGTCACAATCAGATATTTTTCGAACAGAATCTCATGTGACACGAAAACCTGCTCACCAATCGGTATCTCAGACTCTACATCGCCTGCCTGAGCAGCCAAGTCAGCTAGAGTCACAACGACCGGCGCAATtgtgtaatttcattaatcaaccAAAAACGACACAAACATACCAACAGACTTCGCAGCAAACAACCAGAGAACAATCATGCATGGATTTATCCAGCGGACTAATCTTTACTTGTCCCTCCTGTAAAGATTTCACATGCACTACTGCTGAGGAATTGAAATTGCACCGAATACGACATACAAAACCGCAACCGATACAGCCAAGCAAATCATACTGTACCTCAACCTCTGATGTTGAACCTCGTGCACATAGCAGTTCATATTCTCCTATAACGAATCAACAACCTCGACCATCTTCCAACGAACCGTTATATGTGTGTAATAAATGTCATATCTTCCGTACCACCAGTCACGTGGAACTTGAAGAGCATATGAAACAGCATCACAAATCCTATATATGCCAGTTGTGCCATATCTACAAGTGTAAATCCGCGACAAAAATGCAAGATCATATTAATCTACACATAGATGGGAAAATTGCGCCACATGCGGTACGACACACCCTTCAACACGATGGTACAGtcgtatcaaaaattcaaGCATCACAACTTCGGAGTTCATCCTTTAATGAATCCTCGCACTCTGCCGGTGTTCGATCTTCACCAGTACATCAGACGCAACCGACTCAGGTCAGGAGCAAACAATATTCAGAGTGTGACTTTCGCAGTAACGGTGATTCCCAAGTCCTGGATCATGAGACTAATACAGATACTTTAAATTCATGTTCCAAAAAACAACCGAGGGAACAttcaggattaaaaaaaatgctttattatttttgtaaagtaTGTAAACCAACTCCTGTATTTCAGACTGCAGCTGAGCTGGAACGGCATCAAATTAGCCTGCATCCTTAA
Protein Sequence: MEDLDIQSKPSEEIANMSDIPDDLSHKSMPVMENKSIRAITDTEREANSLESDTCHWRDMLKLCTPLSIQLTHLSKDILKKFTVPKKNVTQRLSGSIKNLVMDSRDYRSRKRKKKNVSTKVKYARKKQKTILDKTSNPNESDENSILKSCTVTSTNDNVSTAPACASEEYIRSEKIISASAMDKVLDGPISMEHTGKDDTSSVQCLNENTEEHTQVEKNNTETEESRYQEYVRNILMEYCYSYRNLSHMSKGMNDNENSSDTKSTTGDKRRSNENFPDDQIPSWNSRKRRKKAQLNSKDETIVNRECPKKKQQQRNQKNFKSTPKKDGRRRPVFMQRTKSPSCTPPAAEQEIGKTGADSPKKLKIQLMKLKDVSGMYAPIESTDMILENERDVSSSMNNDNDSVVGSEGISDAETVVNSMFTEESRNGIEIQESDHALDSIPIIALEKKSGSGSEISNVSTERDLEIVEKQRKTSMSSDEIVDRNSEADNYINEVDADIDVDAILRLRYGIRKDPVILLEKLNLTHNYVSTNVYQYDHDVSDVLEESDSSSSDSEIFMFVRKRKLSSMRSRRISSSSEEEQGSSIKPVSTPVSSKDEDGKNRSPISRTTNTREETSEVFVTNQTSGISKDTSLEGSEHVATLVKKKVSQPENTNNLSPKNVVQNPNIIEYNSDSLDSDIQILSVMTMNSNVPPKTCEKMGINSPSTALSPKKSLSMLGTDNTGSLVVPHTNETPIVDTNETPIVDTNETPIVDTNETPIVDTNETPIVNTQSPVKNTQTPSGSKITPVSATPKLSCHICNRKYVRKRSLKIHMELQHTNDPSKFSKPDTTSCTTQECDNANECLDCGICSKKFVSKKEFVDHVFNHQSEAQQDYRTAPDKRSRAVWLDLYGLKDKNAEDQHVEKSKKDKKDSSSDKRIRKEEQIISSLTASPKEVVVCPCHPNNGLLNEQGSSVYIEMVLLCEHCNVVFRRKECLETHYRVSAQCSVNRTSGRVPKLYCTACNVTVESLSVLRHHLEMHPRLQVRGIVTFLCNICKVIFFGIGSIFRRHWFSHIKNPLFVASRHSFPKISVMKALENYNVSAEERMQVAQAAELAENIKYVLIAEHVCRNCKLPFGSEADLTNHLTSCSGSKNTSNVTNALNDGTTCSTCQKTFTDKSNYDIHVDKCHAMADGSSPAKSKDTIGYSYDICHMTCQTEDQLKLHQNSHSSAGLFLCSRCGISFSAVEPFTTHTQATCTICDKQFDCQKRYQDHLSSHFTNLAISEKPQESLTKTLTSCETNLEVDKRTAKQNHVENTEVTVSSGNSPLQATRSAEPDQSKSQTEVRYLIIRDEVTKLPKQVVTITSAGSTSNTSCISKESKQQTSILNEILSINTPMKNVTNIVKAQPDNIGKDPLASGEEKDTATTMDTEVPTDSSETSSTTGMPHSSNNEKTPTSGFLRVKSMSELLEKRDKKSYICKTCGLPCTSAENLAEHSNTHVTHQMANEKIPPSVNGVQRIVDQDSLRLLNQYITSNKLSLQPIRSNITNASSNNFNTQMTTNVNNTQQANNEGICGNASAFTPCVICGTVFNATENPIHCQAATTSTGQVNTHTNARVYQPVANNQTQSIENASTFNSAVHHSPFVTYTSNTIGREPPVSAVNGVNVNLNMNQQLAQPLPNSQWTNLTYDTTNVPIVHSQVPSRLPPPYSAPTNIHSNTLPKNMNGTTTATTNSHCIVPNPPMRPQYPYRAVSQSGNKSVPAKPLNSSFSSSTSFTNNNTQPITTDAPIGSTRPSGYSMNYGILNVPLQQSQSDIFRTESHVTRKPAHQSVSQTLHRLPEQPSQLESQRPAQLCNFINQPKTTQTYQQTSQQTTREQSCMDLSSGLIFTCPSCKDFTCTTAEELKLHRIRHTKPQPIQPSKSYCTSTSDVEPRAHSSSYSPITNQQPRPSSNEPLYVCNKCHIFRTTSHVELEEHMKQHHKSYICQLCHIYKCKSATKMQDHINLHIDGKIAPHAVRHTLQHDGTVVSKIQASQLRSSSFNESSHSAGVRSSPVHQTQPTQVRSKQYSECDFRSNGDSQVLDHETNTDTLNSCSKKQPREHSGLKKMLYYFCKVCKPTPVFQTAAELERHQISLHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00297919;
90% Identity: iTF_00254669;
80% Identity: -