Basic Information

Insect: Calameuta pallipes
Gene Symbol: ECU06_1150
Assembly: GCA_030142375.1
Location: JARQSW010000441.1:439727-444771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0021 0.17 12.6 0.2 2 23 300 321 299 321 0.97

2 16 1.1e-05 0.00083 19.9 5.3 1 23 331 353 331 353 0.98

3 16 1.3e-06 0.0001 22.7 1.1 1 23 359 382 359 382 0.95

4 16 5.8e-05 0.0045 17.6 0.6 1 23 388 410 388 410 0.98

5 16 4.1e-05 0.0032 18.0 0.9 1 23 416 438 416 438 0.96

6 16 0.00015 0.012 16.3 2.9 1 23 444 466 444 466 0.97

7 16 8.1e-06 0.00063 20.3 0.5 1 23 472 494 472 494 0.98

8 16 0.0073 0.57 11.0 6.6 1 23 617 640 617 640 0.92

9 16 0.15 12 6.8 1.2 1 19 702 720 702 725 0.91

10 16 5.6e-05 0.0044 17.6 1.8 1 23 758 780 758 780 0.98

11 16 1.5e-05 0.0012 19.4 1.6 1 23 786 809 786 809 0.97

12 16 3.8e-06 0.0003 21.3 0.3 1 23 815 837 815 837 0.98

13 16 1.6e-07 1.2e-05 25.7 0.6 1 23 843 865 843 865 0.99

14 16 7.4e-05 0.0059 17.2 0.5 1 23 871 893 871 893 0.98

15 16 1.4e-05 0.0011 19.5 1.6 1 23 899 921 899 921 0.96

16 16 2.8e-05 0.0022 18.6 1.2 2 23 928 950 927 950 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0021	0.17	12.6	0.2	2	23	300	321	299	321	0.97
2	16	1.1e-05	0.00083	19.9	5.3	1	23	331	353	331	353	0.98
3	16	1.3e-06	0.0001	22.7	1.1	1	23	359	382	359	382	0.95
4	16	5.8e-05	0.0045	17.6	0.6	1	23	388	410	388	410	0.98
5	16	4.1e-05	0.0032	18.0	0.9	1	23	416	438	416	438	0.96
6	16	0.00015	0.012	16.3	2.9	1	23	444	466	444	466	0.97
7	16	8.1e-06	0.00063	20.3	0.5	1	23	472	494	472	494	0.98
8	16	0.0073	0.57	11.0	6.6	1	23	617	640	617	640	0.92
9	16	0.15	12	6.8	1.2	1	19	702	720	702	725	0.91
10	16	5.6e-05	0.0044	17.6	1.8	1	23	758	780	758	780	0.98
11	16	1.5e-05	0.0012	19.4	1.6	1	23	786	809	786	809	0.97
12	16	3.8e-06	0.0003	21.3	0.3	1	23	815	837	815	837	0.98
13	16	1.6e-07	1.2e-05	25.7	0.6	1	23	843	865	843	865	0.99
14	16	7.4e-05	0.0059	17.2	0.5	1	23	871	893	871	893	0.98
15	16	1.4e-05	0.0011	19.5	1.6	1	23	899	921	899	921	0.96
16	16	2.8e-05	0.0022	18.6	1.2	2	23	928	950	927	950	0.94

Sequence Information

Coding Sequence: ATGAGTGGCGTTCCTCAAGAATATGAGATGGAGGTTGGAACATCAGTTGAGTTGGAGGCTTGTGAAGACGAATCTATACTGATACAAACTGTAAAGAATATAGTtgaagagaatgaagaaaatgaagaagctACGGAGGAATATTTTGTGGTGACAAATATCCAGAATGAACAAACTGGTGAAATAGAAGTTACTAATGCAAAAGTGATTGATACAATCAGTCACCCTGAAGAGAATTCAAATTGGATGGATATGTGCAGAGTTTGTGCTAATTTAAATGACCATCTAATCCCTATTTTTGAGGGTGAAGGTGCTGAGCATGAGCTATGTAACAAAATTCATAAGTACCTCCCTATTCATGTATCTGAAACTGATAATTTGCCACTCCAGCTGTGTTACCACTGTGCAGCAACACTTTTAGCATGGCACGAATTGGCTGAAGGATGCCTGGATGCTGAACGTCGTCTTCTTCAAATGCAAGAAGAATTTCAGCATAAACAACAGCCACATGATGAGCAGCAGAATCATATGAAAGGAGATCTGAATGAGGAGATAATTGTCAACGATACTGAAAGGTCCAGTAGAGTCCAGACACCATTTAAAGTATTCCTTGACACGcagaatatattttggaagCCGTACAAAAGCCCAAATCAACGACATGACAGAAAACTCATGATGAGAAGGGATACAGACTCGGCTTGGATAACCGTTGTGGACACGACCCTTCACCAGGGTCCAATGATGCCTGACCCACTGGCTAGTAATGATTCTGAAATTAAACAAGATAAGTCCAATGTATCGAAAGAAGCTATCACCAAGGGGTACAGTAAATTACACACGCATACGATAGCCCTAGAGAATCATTTGAATGAGGAACAAGAGAGAACAAGGACTAAATGTGAAACATGCTCACAAGAATTTGATCAGGCTGGAGACTTACAAGAGCATAGTAAAGTACACAAAGTTTTAACCGACATACAAGAATCTCATCAATGTCTAGAATGCGGAAAGTGTTTCAAACTAAAAGACTCGTATCTAAGGCACATGAGAATACATACAGACGAGCGGCCTTTTACCTGTCACATTTGTGGAAAACAATTCCGCGACTCTGGCGGTTTATCCAGACATCTAAAAGATGTGCATGCTAAAGTGAAAAACTTTTCCTGCGATATTTGCGGCAGGTCGTTTGCCTCCAAGGCTACCAGGGATGATCACCGTCGCACTCACACGGGAGAACGACCGTACATCTGCGACTCGTGCGGCAAGACATTCAAATCAAAAGCCTCTCTCTATATACACAGCAAACTGCATACAGATGAATTTCCACACCCGTGTTCCTActgtaataagaaatttcgtcGAAGACAAGAAATGCTGGCACATGTCACCACTCATACCGGCGAGAAGAATTACGTATGTGACGTATGCTCAAAACGATTCCGTGTCAAATCGGAACTCGTCAGACATAAACTTATTCATTCCGAGGATAAACCATTTGTGTGCACAAAGTTTGGCGCCCCAAGGAAGAAATCCTTTGCGGCATACCGTTCAGCTCAAATGGCACTTTTATCCAGAAATAGTCCCACACAATTGAATCGAAAATGCGCGGTTCCTGGAGAGCAGGAAGTGACTGATCCCTTAGCGCAAACCGGAGAGTCTGACGAAGTGAAAGTAGAAGTGCTGACATACGACGAGAGTAGTCTAAATTCGGTGGATGGAAGCACCGACTCGGAGTACCAACCGGAAAATACAGGAACGCATATCCAAAGAAGAAATCCTACTCGTACAATTGCACGAAATTCTGTGATATCCAACGAACATGTCTCGAAACAAGCTAAGACGATGCACCCTTGTGAAAAATGTGAGCGAGTTTTCAAAagagaatttcattataagCGGCACGTGGCCAACTGCCACGAGAAAATGGTAACAAGAAGCGACAGCGAGGACTGCACTGAAAGTATTAATGCGGAATCTTCACTGAAGACCAAGCTCGTTGAAATCGAGGAACCGAATGTTACtgaagaagaaagtgaaactGATAATAAGATTGTTGATTGGGAAGCATGCAATAAGTCTAGAAGAAGGAGACTTCAGTCATATCCTTGCATGCATTGTGATTATACGgctaagaaaaagaagttacTCGAATTGCATAATGTGGAATACCACCCAGAATTGTCAATTAAGAAGCAAAGTAAAAAGCCCAGAAGCATAGACAAAGAGACTGTAAAACGTGCAAGAATGGAAGTGAATGGTAGagtttattatcattgtaacGAATGTggtaaaaatctttattccCCTTATACATTCTCTTGGCATATGAGAATTCACACTGGTGAACGTCCCTTTACTTGTCATCTTTGCGGAAAACAATTCCGTGTCAATCAGGGGTTGGCAAGACATCTGCGCGAGACTCATGCGGGTATCAAGAAGTTTCCTTGTGACATTTGCGGTCGTATGTTTTCTACAAAACGTAATGCTGAAGATCACAGGCGGATACATACTGGCGAGAGACCATACGTGTGCAACATATGTGGAAAAGCATTTAAACAAAAGGCTTCGCTGTTTGTGCATAATCGCACGCATACTGACTTTTTTCCATTCAAATGTAGCTATTGCGATCAAGGCTTTCGTACCAGACCACCTCTAATGGTGCATATCACTAAGCACACTGGTGAAAAACCCCATGCATGTGACATATGTGGTCGCCGGTTTCGCATAAAATATGAACTAAAGCGACATCGACTGATACACTTTGATGAGAAACCTTGGCAATGTACAGACTGTGGGCTCTCTTTCCGCCAAAAGCGTTATTTAGTTAATCATAAAAAACTGAATCACAACACAATTCCTTCATTGCCTACGCACGAGTAA
Protein Sequence: MSGVPQEYEMEVGTSVELEACEDESILIQTVKNIVEENEENEEATEEYFVVTNIQNEQTGEIEVTNAKVIDTISHPEENSNWMDMCRVCANLNDHLIPIFEGEGAEHELCNKIHKYLPIHVSETDNLPLQLCYHCAATLLAWHELAEGCLDAERRLLQMQEEFQHKQQPHDEQQNHMKGDLNEEIIVNDTERSSRVQTPFKVFLDTQNIFWKPYKSPNQRHDRKLMMRRDTDSAWITVVDTTLHQGPMMPDPLASNDSEIKQDKSNVSKEAITKGYSKLHTHTIALENHLNEEQERTRTKCETCSQEFDQAGDLQEHSKVHKVLTDIQESHQCLECGKCFKLKDSYLRHMRIHTDERPFTCHICGKQFRDSGGLSRHLKDVHAKVKNFSCDICGRSFASKATRDDHRRTHTGERPYICDSCGKTFKSKASLYIHSKLHTDEFPHPCSYCNKKFRRRQEMLAHVTTHTGEKNYVCDVCSKRFRVKSELVRHKLIHSEDKPFVCTKFGAPRKKSFAAYRSAQMALLSRNSPTQLNRKCAVPGEQEVTDPLAQTGESDEVKVEVLTYDESSLNSVDGSTDSEYQPENTGTHIQRRNPTRTIARNSVISNEHVSKQAKTMHPCEKCERVFKREFHYKRHVANCHEKMVTRSDSEDCTESINAESSLKTKLVEIEEPNVTEEESETDNKIVDWEACNKSRRRRLQSYPCMHCDYTAKKKKLLELHNVEYHPELSIKKQSKKPRSIDKETVKRARMEVNGRVYYHCNECGKNLYSPYTFSWHMRIHTGERPFTCHLCGKQFRVNQGLARHLRETHAGIKKFPCDICGRMFSTKRNAEDHRRIHTGERPYVCNICGKAFKQKASLFVHNRTHTDFFPFKCSYCDQGFRTRPPLMVHITKHTGEKPHACDICGRRFRIKYELKRHRLIHFDEKPWQCTDCGLSFRQKRYLVNHKKLNHNTIPSLPTHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01473345;
90% Identity: iTF_01473345;
80% Identity: iTF_00254745;