Basic Information

Insect: Calameuta idolon
Gene Symbol: -
Assembly: GCA_030142285.1
Location: JARQSV010000642.1:219179-222664[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00013 0.0096 16.4 1.5 1 23 115 138 115 138 0.96

2 13 0.011 0.83 10.3 4.6 2 23 255 277 255 277 0.91

3 13 0.00072 0.052 14.1 1.7 2 23 334 356 333 356 0.95

4 13 6.4 4.7e+02 1.7 7.6 3 23 443 464 442 464 0.95

5 13 6 4.4e+02 1.7 2.9 1 23 514 537 514 537 0.94

6 13 0.00036 0.026 15.0 0.1 3 23 586 607 585 607 0.95

7 13 0.11 8 7.2 2.1 3 23 636 657 634 657 0.93

8 13 0.0084 0.61 10.7 3.6 2 23 705 727 704 727 0.96

9 13 0.11 8.2 7.2 4.2 3 23 742 763 740 763 0.92

10 13 0.00021 0.015 15.8 0.2 2 23 808 830 808 830 0.93

11 13 0.053 3.8 8.2 1.6 1 23 914 936 914 936 0.98

12 13 0.00026 0.019 15.5 0.7 2 23 952 974 951 974 0.96

13 13 0.0049 0.35 11.5 0.4 1 23 1043 1066 1043 1066 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00013	0.0096	16.4	1.5	1	23	115	138	115	138	0.96
2	13	0.011	0.83	10.3	4.6	2	23	255	277	255	277	0.91
3	13	0.00072	0.052	14.1	1.7	2	23	334	356	333	356	0.95
4	13	6.4	4.7e+02	1.7	7.6	3	23	443	464	442	464	0.95
5	13	6	4.4e+02	1.7	2.9	1	23	514	537	514	537	0.94
6	13	0.00036	0.026	15.0	0.1	3	23	586	607	585	607	0.95
7	13	0.11	8	7.2	2.1	3	23	636	657	634	657	0.93
8	13	0.0084	0.61	10.7	3.6	2	23	705	727	704	727	0.96
9	13	0.11	8.2	7.2	4.2	3	23	742	763	740	763	0.92
10	13	0.00021	0.015	15.8	0.2	2	23	808	830	808	830	0.93
11	13	0.053	3.8	8.2	1.6	1	23	914	936	914	936	0.98
12	13	0.00026	0.019	15.5	0.7	2	23	952	974	951	974	0.96
13	13	0.0049	0.35	11.5	0.4	1	23	1043	1066	1043	1066	0.98

Sequence Information

Coding Sequence: ATGACGTCCACACTATCGCGCGGTGCGATCCTGCCTGATCCTGGCGAGCTGGACAGCGACGGTTCGAGCGGGGAGGAGCGGGACGCCAGGAAGCGTCTCCATGGCGACCTGGACAGCACCGGTCCGAAGAAGCGACGGAAACAGACGACCCCGGTGAGGTTCCCGGCGTCGTTGATGACTGGTGAACGAGCTGAGTCCGAGGAGGACGGCGAGGACGAGGAGCCGGACGTCGACGAGGACCTCGAGGCTGAGCGGGAAGGTAAGCAGCAGCGTCCTTCTTCCCAGGATTCGGTCACCGGTGATCATCGAGTTACGAGCAAGGACGAGAACCTGAATAACGAATTCCGCTGCCAATATTGTAGTCAATTTTTCGATAACAAGGAAACTTTGAATCAGCATATAGATAGCGAGCATTATGTACAGTCGCGAGACCAAGTGCAGGTTAAGTTAGAGCCAAACCAGGAGCAGTCCGAGAGTCCGGTCAATCTGTCGGGACTCGGTATAAAGAGTTTCGCAGCATCTTGGCTGTCGGGTCAAGTTCAAGGTCAGCCACCGGGTCAAGCTCAGATACAGAGCGAAGACTGGACGGTCGGTAATACAGTGGCGCCCGTGAGCGCGATACCAAATCATCTGCAGAGTCTACCGTTTCCTGGTGCCCTGGCCCAGTATCTTCCTCTACCTGGTTTCTCGCTACCGGACTCGAGTCAGATGTCAAGACCACCCATAGGCCCGGCCCCGGTGCGGATATTCAATCCGGACGCCTACTGCGACCTCTGCAACAAGGAGTTCTGCAACAAGTACTTCCTGAAGACACACAAAGCGAACAAGCACGGGATCTACGTGGACTCGCCAGGTCAGCCAACCACGGAGTCCAATCTTGGTCCGCCGGTTTACGGTGGCGCGTTCACTGCTGGCAACATTAAGATGGAACAGATTCAGAGGTTAGACGTCGCGGCGGTGCCACCGCCCCCGCCGCCCTGCATACCGACGCCCAGCACCTCCTGCGACGTCTGTCAGAAGAGGTTCAAGAACGAAGAGTCCGTGAGGAAGCACAAGCAAAAAGTTCATTCCGAGAACAGCGAGCCTGGTGAGACGCAGCCGATGCAGCCGCCATCTGTCGACGACGACCGGGACCAGAGTTATCACAGTCTAAGTCCAGGAGCTATGGAAGCACTTTTCAAGCAGGAGTTCGGCGTGGAACAGGAAGACACGAGCTTCATGCCGGCACCTAGACATCTGTCGCCCCAGTCGATTCAGCAAGCTAGGGATTCAGGCTTCAACGCGGATCGACTACGCAGACTAGGCGTCATCAATCCCGATGCCTTCTGCGAGATCTGCTGCAAGGAATATTGCAACAAGTACTTCCTGAGGACGCACAAGATGAAGCGCCATGGTATCTACATCCAGGACAGCGAGAAGTCACCCAGCAACCCTGGGGCTGCCGCTAGCTGGCACCAGGTGCAAACCAGTCCGCTGAACCTGATCGTAACCGAGACGACCGGGAACAGTTCAGAGTCCAGCGATCGACCTGGCGAAGAGCACGAGTGCAAGCCTTGCGGACTAAGATTTCAGACAAACGGATTGCATCAGGCGCACAGGCAGAAGATGCACGAGATCGAGGAGCAAAGGTCACCCAAGCAGGATTACGAGGTCGAGATCACGGATCAGCGACCCGACTCCATTTCCGAAGATCTTCAGAAGCTCCAGACAATGATTCTGCAACTAAACGGTTTGGAATCCAGTCGCGGTGCACCCTGCGCAGTCTGTGGAAAGGAATTTGAAACCCGATTGGCTCTCAGGACTCATATGACCAGCGACCACGGCGCCATCATCGAGGAGCCAACGTCACCCTGTCCGGTGACAGAGAAGTCGCCGCCACCTATTGGCCCCGGTACCGTCGTGAACTGCACCGTCTGCGACAAGGAATGTCTCAATCACGATCTATTAAGAAAGCACATCAGCGAGGAACATCAGAATCAAAATCAGAGTTCTACACCGGCGACGACACCGCTTCCCCAGGTGGTGCCGATTCCCGTAACTACCACTCCGACGTCGGCGCCAGCGGCGCAGACCGAGCGCAAGGCATCGGTGTCCATGACGCCAACTTCAAGCTACTGCGAGATATGCAATAAGGAACTGTGCAACAAGTACTTCATGAAGACTCACATGCAGAGGATGCACggtattgaaattgaaaatggcgcCCAGATCGGTGGCGttatatgcaatatatgtaACAAGGAACTATGCAGCAAGTACTTCCTCAGGGTTCACAAGCACAACACGCACGGGATCGTCGAAGAGGGCACTTCCGGTTCGACGAAGCAAGAATCCTACGAGTCCTCGAATAGCGAAGACTCGGCCTTGAAACCCGAACAATTGGGTGACCTGAGTCACAGGTACTTCACCCACTTCACCGAAGTGTGTCCGATATGCAGCAGAAGATTTAGGAGTACGAAATGGCTGAAGGCTCATCTACTGGGAGATCATGGGAAGGCAGGAGTGGACAAATGGCGTGAATTGGAACAGCAGTACCAGTCGACACCGCGAGGTgggagcagcagcagtaaCAACAGATCGGCAGGACCTTCGAGGTCTGCGCATCAGAACTCTAGCCTAAAAATACCGAACGGCCTGGAACTGGGTCAGCACGTGAAATCCACCGATTACACTGGTCTTGGCAATCAGGTACTGTCCAACTTGTTTGGTACCGGTTCCGAGGATCAGCAACTCAAGAGCTACAGGTGTTCCTACTGCAACTTCACGACGACGGTGCTGCCGTTTCTCTTCCTTCATGAAAGATCTCACGTGAGTCCTCAGGGCGGAACTGGCCTGGAAAGTGAGAGGGGACTCCAATGTCCGGTTTGCTCCCAGGGATTTCCTCAGCCCGAACTCCTGCACCATCATCTCCTGACTCAACATCAGTTTCCTGGGCTCCTCACGCAATTCCAACCGCCGACGCTGAACAACATCAGGCCTGAATTAGGCGTCGACAAGCATCAGGTTGAAACGAAGGATCAGGATCAGAAGGAGGAGCGTCGACAGAGTAGTCCTCAGACGTCATCAAGTTTGGACGTTAAACAAAAAACTGAGGAACCCGCGGTTCAGGTGACACCTCAGGGCGCCTATAAGTGCGCCCAGTGTGGCTACGCTACTGCCAACCTCAACAGGATCAAGAAGCACATCAGGAAGGATCACAAGACCCTCGGCGATCCTACCGACAGCGTGATAACGGAGCTGAGCAAGACTCTCAAGGACGTCGCCAACAAGCACAAGGTGCCGGCCAGTTACGCGATGCCGCAGGACATGAATTCGAATCCCGACAAGACGATAATGCAGCCGTTTCTCATAGAGGAgtgcgacgtcgcgacgcccggcgaAGAATCGAGCTCGGAGAGACGCTTCGCGCCGGCCCTCATTTATTTGCCCGTTAAGTCGCGCATAAACGGCCCCTTGACTGCGTCCTTTACACTGAGTCCCGCCTGA
Protein Sequence: MTSTLSRGAILPDPGELDSDGSSGEERDARKRLHGDLDSTGPKKRRKQTTPVRFPASLMTGERAESEEDGEDEEPDVDEDLEAEREGKQQRPSSQDSVTGDHRVTSKDENLNNEFRCQYCSQFFDNKETLNQHIDSEHYVQSRDQVQVKLEPNQEQSESPVNLSGLGIKSFAASWLSGQVQGQPPGQAQIQSEDWTVGNTVAPVSAIPNHLQSLPFPGALAQYLPLPGFSLPDSSQMSRPPIGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGQPTTESNLGPPVYGGAFTAGNIKMEQIQRLDVAAVPPPPPPCIPTPSTSCDVCQKRFKNEESVRKHKQKVHSENSEPGETQPMQPPSVDDDRDQSYHSLSPGAMEALFKQEFGVEQEDTSFMPAPRHLSPQSIQQARDSGFNADRLRRLGVINPDAFCEICCKEYCNKYFLRTHKMKRHGIYIQDSEKSPSNPGAAASWHQVQTSPLNLIVTETTGNSSESSDRPGEEHECKPCGLRFQTNGLHQAHRQKMHEIEEQRSPKQDYEVEITDQRPDSISEDLQKLQTMILQLNGLESSRGAPCAVCGKEFETRLALRTHMTSDHGAIIEEPTSPCPVTEKSPPPIGPGTVVNCTVCDKECLNHDLLRKHISEEHQNQNQSSTPATTPLPQVVPIPVTTTPTSAPAAQTERKASVSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVEEGTSGSTKQESYESSNSEDSALKPEQLGDLSHRYFTHFTEVCPICSRRFRSTKWLKAHLLGDHGKAGVDKWRELEQQYQSTPRGGSSSSNNRSAGPSRSAHQNSSLKIPNGLELGQHVKSTDYTGLGNQVLSNLFGTGSEDQQLKSYRCSYCNFTTTVLPFLFLHERSHVSPQGGTGLESERGLQCPVCSQGFPQPELLHHHLLTQHQFPGLLTQFQPPTLNNIRPELGVDKHQVETKDQDQKEERRQSSPQTSSSLDVKQKTEEPAVQVTPQGAYKCAQCGYATANLNRIKKHIRKDHKTLGDPTDSVITELSKTLKDVANKHKVPASYAMPQDMNSNPDKTIMQPFLIEECDVATPGEESSSERRFAPALIYLPVKSRINGPLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00253103;
90% Identity: iTF_01474985;
80% Identity: -