Basic Information

Insect: Calameuta idolon
Gene Symbol: Hr39
Assembly: GCA_030142285.1
Location: JARQSV010000638.1:187734-191226[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.25 2.3e+03 -2.3 11.1 53 163 197 315 175 350 0.61

2 5 0.28 2.6e+03 -2.5 1.7 87 129 352 402 321 441 0.43

3 5 3.7e-08 0.00034 20.2 0.0 1 21 520 540 520 544 0.92

4 5 0.62 5.8e+03 -3.6 0.0 89 113 578 602 559 609 0.54

5 5 5.3e-70 5e-66 223.9 0.0 202 408 704 905 672 905 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.25	2.3e+03	-2.3	11.1	53	163	197	315	175	350	0.61
2	5	0.28	2.6e+03	-2.5	1.7	87	129	352	402	321	441	0.43
3	5	3.7e-08	0.00034	20.2	0.0	1	21	520	540	520	544	0.92
4	5	0.62	5.8e+03	-3.6	0.0	89	113	578	602	559	609	0.54
5	5	5.3e-70	5e-66	223.9	0.0	202	408	704	905	672	905	0.94

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGCCCAGGCTGGTGGCCTCCGGCACAGTCCTGGAAGTCATCTTCGTTGGGCGCACGCACCGAGGCTGGGAAGAACGTTTCCGTCACTACGATTAACGTGCCACCGGCCCATGAGATGCATGACGGTAAGAGCGTCTGCAAGTATCTGGGAGGACAGAATGGCGTGACGGTTTCAGTAGTGTCCAGCTGCGGATCAGCTTCCGCTTCTGGGTCTAGTAATGTCGTCGGTACCGGGAGCGCTGGCGAGTCCGGTTCCTTGGACGACGTTGAAGACAGTGACGGCGAGGTGAGCAAGATCGACTTCCGGGGTGTTAATCTGCGCACGAAGAAGAAACGAGATGCTTCCGGCGGACAAGAAAGTGAGAACAGTGCAATCGGCACTGACAATATTCAGCAGCAACCCGAAAGGCCAATGTCTTGGGAGGGTGAACTCTCGGACCAAGAAATGTCTTCCAATACTATCACGAACCAGGACCACGAAGAAACTTTTATGGAGGGTGTACAAGTGTGCAGTGCGAGTCCTGGACCACAGGAACAAAAGTTCCCAATAAAACCGGAGCCGGACTTTAGGTCAAGTCCAGGACTCGCTTTGGGCTCCCTTAATGAGACGGCCTTACCGCTTACTCATGCTCAGCAactgcagcagcagcagcaacagcaacaacagcaacagcagcagcagcaacgtgGTCTGGACGGTCTTGAACAGACACAGCAGAGCGACCTGCCCTTGCTGGTTGGCAAACTCCTAGGGGGTTATAATAGTTCAACCCCGAATCACAGTCCTGTACTAAATCCTCGGCATCATCTTACCAAGCACAGTCACACCCGGTCTCAAGTCCCTTCGCCGGATTCGGCGATTCACTCGGCCTATAGTGTCTTCAGCTCTCCAACGCAGAGTCCTCACGCGGCACGGCACTCTGCACTAGGTGCTGGCAGTCCTGTACCATCCTCATCGCTGTCACTTTCACGACACAGTTTCAATAATTCCACGTCTTCGTTAtccttgtctctctcgcactctctaTCGAGGAACAATTCGGACGCCTCCAGTAGCTGCTATAGCTACGGATCCCTCAGTCCACCGACACACTCGCCCGTCCAGCAACCGAGGCATTCCCAtccgcagcagcagcagcagcatcatcAAGTCACTCAGGGTAGTCCTTTGCATCTACCCGCAGCCACCGGTGCCACTCATCATTATTCCACCCCGGGATCGGAACTCTCGGAGGGTCTCGCAGAGGACCAAGAAGACTGTAGGATAGCGCCGGCACCCTCGGGTATCTCCACAAGGCAGCAACTTATAAATAGTCCATGTCCTATATGCGGCGACAAGATCAGCGGCTTCCATTATGGTATATTCTCCTGCGAATCCTGTAAGGGATTCTTCAAGAGGACCGTACAGAATCGTAAGAATTATGTGTGCCTACGTGGTGCGGGATGTCCCGTCACTGTCGCCACTAGGAAGAAGTGTCCAGCATGCCGATTCGACAAGTGCCTGAATATGGGAATGAAGCTGGAAGCGATAAGGGAGGATAGGACTAGAGGCGGTCGCAGTACCTATCAGTGTACCTACACTCTACCTGCTAACCTTATCGGAGGGCCTACTGGTGGCATTTCCGGTGATAAAATCACCGGTGGTACCTGTAGTCCAGCACCGCCGGGATCAGAGCATCATCACTCAATGAGACATCATTCGAATCATTCGCACAAGTTGCAAGTGGTGCCACAGCTCCTGCAGGACATCATGGACGTGGAGCATCTCTGGCATTACAACGACAATGATCGTATGACTAGTGGCCAGGGTAGTGGTATCAGTGGTGGTAACGGTAGTGGTAGCgctggcggtggcggtggtggtggtagcgGTAGCGTTAGTGGTGTCAGTGGTAGTGCTAGTGGCGGTGGAAATTCATCCGGAGGCGGAAGTTCATCCGCCGTCGGAAGTAACGGGAACATACCTAGAGGAGAATCGTCGAGACCAAGTTCCGCGGGTCCTCAATCCTCCAATCACGAACAACATTCACCACCAGCGAGTACCCCTAACTCGAATTCAACCTCCAGTCCCAATGGGAATCCCACGCAGCATCCGGACTTTCTTTCGAATCTGTGTAACATCGCCGATCATAGACTCTACAAGATCGTCAAGTGGTGCAAGAGTCTACCGCTCTTCAAGAACATCTCCATAGACGATCAGATATGCCTTCTTATCAACTCCTGGTGCGAACTACTCTTATTCTCCTGCTGCTTTCGCAGTATGAGTACGCCTGGTGAGATCAGGGTGTCCCTTGGCAAGTCGATAACTCTCGAACAGGCGAGACAGTTAGGTCTTGCGACGTGTATCGAGAGGATGCTGGCTTTCACAAATAACCTTAGACGACTCAGGGTGGATCAGTACGAGTACGTGGCGATGAAGGTCATAGTTCTGCTAACCTCGGACACCAGCGAACTGAAAGAACCCGAGAAGGTAAGAGCGTCCCAGGAGAAGGCTCTCCAGGCACTGCAGCAGTATACAATCGCGAGGTATCCCGAGATGCCGGCAAAGTTTGGAGAGTTGCTACTCAGGATCCCGGACCTGCAGAGGACCTGTCAGGCCGGGAAGGAGTTGCTAAGCGCGAAGCGTGCCGAGGGCGAAGGCAGCTCTTTCAATCTGCTAATGGAACTTCTACGAGGCGATCATTGA
Protein Sequence: MSEQNGPTEGPGPGWWPPAQSWKSSSLGARTEAGKNVSVTTINVPPAHEMHDGKSVCKYLGGQNGVTVSVVSSCGSASASGSSNVVGTGSAGESGSLDDVEDSDGEVSKIDFRGVNLRTKKKRDASGGQESENSAIGTDNIQQQPERPMSWEGELSDQEMSSNTITNQDHEETFMEGVQVCSASPGPQEQKFPIKPEPDFRSSPGLALGSLNETALPLTHAQQLQQQQQQQQQQQQQQQRGLDGLEQTQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHPQQQQQHHQVTQGSPLHLPAATGATHHYSTPGSELSEGLAEDQEDCRIAPAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGGPTGGISGDKITGGTCSPAPPGSEHHHSMRHHSNHSHKLQVVPQLLQDIMDVEHLWHYNDNDRMTSGQGSGISGGNGSGSAGGGGGGGSGSVSGVSGSASGGGNSSGGGSSSAVGSNGNIPRGESSRPSSAGPQSSNHEQHSPPASTPNSNSTSSPNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00676835;
90% Identity: iTF_00770401;
80% Identity: iTF_00253609;